FFCP PHASE1:Hg19::chr17:79953252..79953267,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:79953252..79953267,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr17:79953252..79953267,+ | |||
|id=chr17:79953252..79953267,+ | |||
|ontology_enrichment_celltype=CL:0000181!9.09e-16!12;CL:0000417!9.09e-16!12;CL:0000668!9.09e-16!12;CL:0000414!9.09e-16!12;CL:0000412!9.09e-16!12;CL:0000182!9.09e-16!12;CL:0002231!6.78e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.61e-38;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.61e-38,12;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.07e-41;11!UBERON:0009497;5.63e-35;13!UBERON:0001041;4.24e-27;30!UBERON:0003104;5.86e-15;31 | |||
|ontology_enrichment_disease=DOID:0050619!3.45e-21!1;DOID:1357!3.45e-21!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.29e-13;4!DOID:7;7.44e-13;39!DOID:1325;2.35e-08;7!DOID:3904;2.35e-08;7!DOID:3905;8.85e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.29e-13,4;DOID:7,2.38e-12,39;DOID:1325,2.35e-08,7;DOID:3904,2.35e-08,7;DOID:305,2.62e-08,106;DOID:3905,8.85e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001764!3.45e-21!1;UBERON:0001825!3.45e-21!1;UBERON:0002336!7.72e-21!1;UBERON:0001018!7.72e-21!1;UBERON:0002473!7.72e-21!1;UBERON:0005340!7.72e-21!1;UBERON:0002316!7.72e-21!1;UBERON:0003544!7.72e-21!1;UBERON:0001020!7.72e-21!1;UBERON:0005970!7.72e-21!1;UBERON:0002437!7.72e-21!1;UBERON:0003127!3.70e-11!2;UBERON:0005162!4.09e-11!2;UBERON:0000122!4.09e-11!2;UBERON:0002107!3.35e-10!19;UBERON:0006925!3.35e-10!19;UBERON:0008836!3.35e-10!19;UBERON:0008835!6.84e-09!22;UBERON:0003894!6.84e-09!22;UBERON:0009854!1.57e-08!23;UBERON:0007499!6.81e-08!25;UBERON:0009497!6.81e-08!25;UBERON:0000015!6.81e-08!25;UBERON:0002423!6.81e-08!25;UBERON:0006235!6.81e-08!25;UBERON:0004161!6.81e-08!25;UBERON:0005057!1.30e-07!26;UBERON:0009856!1.30e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.73e-24;19!UBERON:0006925;2.73e-24;19!UBERON:0002423;1.02e-18;25!UBERON:0002365;3.79e-14;31!UBERON:0002330;3.79e-14;31!UBERON:0002368;2.45e-13;33!UBERON:0000949;2.01e-10;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.73e-24,19;UBERON:0006925,2.73e-24,19;UBERON:0008836,2.73e-24,19;UBERON:0008835,3.99e-21,22;UBERON:0003894,3.99e-21,22;UBERON:0009854,2.97e-20,23;UBERON:0007499,1.02e-18,25;UBERON:0009497,1.02e-18,25;UBERON:0000015,1.02e-18,25;UBERON:0002423,1.02e-18,25;UBERON:0006235,1.02e-18,25;UBERON:0004161,1.02e-18,25;UBERON:0009856,4.90e-18,26;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002368,1.18e-13,35;UBERON:0000949,7.94e-11,45;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0003929,3.61e-09,54;UBERON:0005172,3.61e-09,54;UBERON:0005173,3.61e-09,54;UBERON:0005177,1.11e-08,101;UBERON:0002530,1.83e-08,59;UBERON:0002417,2.45e-08,60;UBERON:0000916,2.45e-08,60;UBERON:0009569,6.64e-08,112;UBERON:0004921,1.75e-07,118 | |||
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|short_description=p@chr17:79953252..79953267,+ | |||
}} | }} |
Latest revision as of 22:57, 25 July 2015
Short description: | p@chr17:79953252..79953267, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79953252..79953267, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.61e-38 | 12 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.73e-24 | 19 |
digestive gland | 2.73e-24 | 19 |
liver bud | 2.73e-24 | 19 |
hepatic diverticulum | 3.99e-21 | 22 |
liver primordium | 3.99e-21 | 22 |
digestive tract diverticulum | 2.97e-20 | 23 |
epithelial sac | 1.02e-18 | 25 |
epithelium of foregut-midgut junction | 1.02e-18 | 25 |
anatomical boundary | 1.02e-18 | 25 |
hepatobiliary system | 1.02e-18 | 25 |
foregut-midgut junction | 1.02e-18 | 25 |
septum transversum | 1.02e-18 | 25 |
sac | 4.90e-18 | 26 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
endocrine gland | 1.18e-13 | 35 |
endocrine system | 7.94e-11 | 45 |
endo-epithelium | 1.66e-10 | 82 |
foregut | 5.98e-10 | 87 |
gut epithelium | 3.61e-09 | 54 |
abdomen element | 3.61e-09 | 54 |
abdominal segment element | 3.61e-09 | 54 |
trunk region element | 1.11e-08 | 101 |
gland | 1.83e-08 | 59 |
abdominal segment of trunk | 2.45e-08 | 60 |
abdomen | 2.45e-08 | 60 |
subdivision of trunk | 6.64e-08 | 112 |
subdivision of digestive tract | 1.75e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.29e-13 | 4 |
disease of anatomical entity | 2.38e-12 | 39 |
bronchus cancer | 2.35e-08 | 7 |
bronchogenic carcinoma | 2.35e-08 | 7 |
carcinoma | 2.62e-08 | 106 |
lung carcinoma | 8.85e-07 | 9 |