FFCP PHASE1:Hg19::chr19:49243813..49243823,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:49243813..49243823,- to FFCP PHASE1:Hg19::chr19:49243813..49243823,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54922 | |EntrezGene=54922 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24716 | |HGNC=24716 | ||
|TSSclassifier=strong | |||
|UniProt=Q5U651,Q7L251,Q8IUR2 | |UniProt=Q5U651,Q7L251,Q8IUR2 | ||
|association_with_transcript=146bp_to_ENST00000222145,NM_017805,uc002pki.2_5end | |||
|cluster_id=chr19:49243813..49243823,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_5_at_RASIP1_5end | |||
|id=chr19:49243813..49243823,- | |||
|ontology_enrichment_celltype=CL:0002139!1.37e-34!24;CL:0000115!3.06e-32!35;CL:0000071!6.40e-27!18;CL:0002546!6.40e-27!18;CL:0002078!2.11e-23!44;CL:0000213!1.04e-15!57;CL:0000215!1.04e-15!57;CL:1000413!2.53e-14!9;CL:0002544!5.51e-10!6;CL:0002543!7.19e-10!6;CL:0005020!3.34e-09!6;CL:0002138!3.34e-09!6;CL:0005022!3.34e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.34e-53;24!CL:0000115;1.69e-45;36!CL:0000071;7.31e-45;18!CL:0002078;1.06e-26;45!CL:1000413;2.52e-23;9!CL:0000213;1.08e-19;58!CL:0000215;1.08e-19;58!CL:0002544;6.91e-16;6!CL:0002543;1.14e-15;6!CL:0002138;1.24e-10;6!CL:0002144;4.11e-09;3!CL:0002188;8.72e-09;5!CL:0002618;3.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.26e-55,36;CL:0002139,8.01e-54,24;CL:0000071,5.96e-45,18;CL:0002546,5.96e-45,18;CL:0002078,3.48e-42,45;CL:0000213,1.00e-30,58;CL:0000215,1.00e-30,58;CL:1000413,2.40e-23,9;CL:0002544,6.21e-16,6;CL:0002543,9.80e-16,6;CL:0005020,9.48e-11,6;CL:0002138,9.48e-11,6;CL:0005022,9.48e-11,6;CL:0000222,1.96e-10,121;CL:0000076,3.59e-09,63;CL:0002144,4.13e-09,3;CL:0002188,9.48e-09,5;CL:0002618,3.07e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002546;7.31e-45;18!UBERON:0004872;5.53e-12;7!CL:0005022;1.24e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.22e-61!115;UBERON:0004111!5.33e-29!241;UBERON:0001986!6.40e-27!18;UBERON:0004638!6.40e-27!18;UBERON:0004852!6.40e-27!18;UBERON:0000477!3.22e-26!286;UBERON:0000025!2.20e-25!194;UBERON:0001049!7.92e-21!57;UBERON:0005068!7.92e-21!57;UBERON:0006241!7.92e-21!57;UBERON:0007135!7.92e-21!57;UBERON:0000487!8.48e-21!22;UBERON:0006914!1.62e-17!25;UBERON:0002616!3.01e-17!59;UBERON:0003075!5.60e-16!86;UBERON:0007284!5.60e-16!86;UBERON:0002346!1.02e-14!90;UBERON:0000055!2.51e-14!69;UBERON:0003915!2.53e-14!9;UBERON:0004700!2.53e-14!9;UBERON:0001917!2.53e-14!9;UBERON:0003080!2.62e-14!42;UBERON:0000483!5.48e-14!309;UBERON:0000955!8.50e-14!69;UBERON:0006238!8.50e-14!69;UBERON:0002020!1.25e-13!34;UBERON:0003528!1.25e-13!34;UBERON:0000119!1.29e-13!312;UBERON:0001893!1.90e-13!34;UBERON:0002780!2.59e-13!41;UBERON:0001890!2.59e-13!41;UBERON:0006240!2.59e-13!41;UBERON:0002791!9.82e-13!33;UBERON:0001017!1.23e-12!82;UBERON:0005743!1.79e-12!86;UBERON:0001869!5.69e-12!32;UBERON:0002049!3.21e-11!79;UBERON:0007798!3.21e-11!79;UBERON:0001981!1.25e-10!60;UBERON:0007500!1.25e-10!60;UBERON:0004537!1.25e-10!60;UBERON:0006965!1.25e-10!60;UBERON:0004872!1.38e-10!84;UBERON:0000073!2.66e-10!94;UBERON:0001016!2.66e-10!94;UBERON:0002619!4.45e-10!22;UBERON:0001950!6.32e-10!20;UBERON:0000153!9.70e-10!129;UBERON:0007811!9.70e-10!129;UBERON:0002298!1.30e-09!8;UBERON:0001009!2.02e-09!113;UBERON:0000468!4.23e-09!659;UBERON:0003914!7.07e-09!118;UBERON:0003056!1.62e-08!61;UBERON:0000467!1.93e-08!625;UBERON:0000956!1.94e-08!25;UBERON:0000203!1.94e-08!25;UBERON:0002465!2.15e-08!10;UBERON:0000480!2.27e-08!626;UBERON:0001638!2.61e-08!9;UBERON:0003920!2.61e-08!9;UBERON:0004582!2.61e-08!9;UBERON:0000033!2.63e-08!123;UBERON:0003076!6.82e-08!15;UBERON:0003057!6.82e-08!15;UBERON:0004535!8.19e-08!110;UBERON:0000064!1.01e-07!219;UBERON:0000481!1.71e-07!347;UBERON:0002308!3.41e-07!9;UBERON:0000125!3.41e-07!9;UBERON:0004733!5.64e-07!12;UBERON:0002028!5.64e-07!12;UBERON:0007277!5.64e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.31e-45;18!UBERON:0001986;7.31e-45;18!UBERON:0004852;7.31e-45;18!UBERON:0000487;1.06e-35;22!UBERON:0006914;9.28e-31;25!UBERON:0003915;2.52e-23;9!UBERON:0004700;2.52e-23;9!UBERON:0001917;2.52e-23;9!UBERON:0000490;2.35e-20;33!UBERON:0001638;1.18e-13;9!UBERON:0003920;1.18e-13;9!UBERON:0004582;1.18e-13;9!UBERON:0000055;1.53e-12;65!UBERON:0007500;2.03e-10;56!UBERON:0001981;2.03e-10;56!UBERON:0004537;2.03e-10;56!UBERON:0010523;4.11e-09;3!UBERON:0001915;4.11e-09;3!UBERON:0001982;4.11e-09;3!UBERON:0001009;6.74e-09;112!UBERON:0003978;2.22e-08;3!UBERON:0000946;2.22e-08;3!UBERON:0002049;4.05e-08;75!UBERON:0007798;4.05e-08;75!UBERON:0004151;5.71e-08;3!UBERON:0003914;6.71e-08;74!UBERON:0001473;7.36e-08;8!UBERON:0004536;7.36e-08;8!UBERON:0006558;7.36e-08;8!UBERON:0000025;2.45e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.96e-45,18;UBERON:0001986,5.96e-45,18;UBERON:0004852,5.96e-45,18;UBERON:0000487,9.01e-36,22;UBERON:0006914,8.04e-31,25;UBERON:0000055,1.07e-26,68;UBERON:0003915,2.40e-23,9;UBERON:0004700,2.40e-23,9;UBERON:0001917,2.40e-23,9;UBERON:0002049,3.90e-22,78;UBERON:0007798,3.90e-22,78;UBERON:0004872,1.84e-21,83;UBERON:0007500,3.10e-21,59;UBERON:0001981,3.10e-21,59;UBERON:0004537,3.10e-21,59;UBERON:0006965,3.10e-21,59;UBERON:0001009,5.22e-20,112;UBERON:0003914,3.30e-17,117;UBERON:0004535,7.96e-17,109;UBERON:0001638,1.08e-13,9;UBERON:0003920,1.08e-13,9;UBERON:0004582,1.08e-13,9;UBERON:0007023,1.44e-13,114;UBERON:0004111,4.05e-13,240;UBERON:0000025,8.15e-12,192;UBERON:0010523,4.13e-09,3;UBERON:0001915,4.13e-09,3;UBERON:0001982,4.13e-09,3;UBERON:0003978,2.28e-08,3;UBERON:0009751,2.28e-08,3;UBERON:0000946,2.28e-08,3;UBERON:0002523,2.28e-08,3;UBERON:0005983,2.28e-08,3;UBERON:0002165,2.28e-08,3;UBERON:0002062,2.28e-08,3;UBERON:0007280,2.28e-08,3;UBERON:0003081,4.91e-08,203;UBERON:0003103,5.30e-08,68;UBERON:0001473,6.05e-08,8;UBERON:0004536,6.05e-08,8;UBERON:0006558,6.05e-08,8;UBERON:0004151,7.03e-08,3;UBERON:0000483,1.79e-07,306;UBERON:0000490,2.16e-07,148;UBERON:0003887,2.44e-07,12;UBERON:0000119,2.72e-07,309 | |||
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| ||
|short_description=p5@RASIP1 | |||
}} | }} |
Latest revision as of 03:56, 19 September 2015
Short description: | p5@RASIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RASIP1_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 146bp_to_ENST00000222145, NM_017805, uc002pki.2_5end |
EntrezGene: | RASIP1 |
HGNC: | 24716 |
UniProt: | Q5U651Q7L251Q8IUR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.26e-55 | 36 |
endothelial cell of vascular tree | 8.01e-54 | 24 |
blood vessel endothelial cell | 5.96e-45 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.96e-45 | 18 |
meso-epithelial cell | 3.48e-42 | 45 |
lining cell | 1.00e-30 | 58 |
barrier cell | 1.00e-30 | 58 |
endothelial cell of artery | 2.40e-23 | 9 |
aortic endothelial cell | 6.21e-16 | 6 |
vein endothelial cell | 9.80e-16 | 6 |
lymphangioblast | 9.48e-11 | 6 |
endothelial cell of lymphatic vessel | 9.48e-11 | 6 |
vascular lymphangioblast | 9.48e-11 | 6 |
mesodermal cell | 1.96e-10 | 121 |
squamous epithelial cell | 3.59e-09 | 63 |
capillary endothelial cell | 4.13e-09 | 3 |
glomerular endothelial cell | 9.48e-09 | 5 |
endothelial cell of umbilical vein | 3.07e-08 | 3 |