FFCP PHASE1:Hg19::chr19:54183760..54183765,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:54183760..54183765,+ | |||
|coexpression_cluster_id=C267 | |||
|description=CAGE_peak_at_chr19:54183760..54183765,+ | |||
|id=chr19:54183760..54183765,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.55e-30!7;CL:0000586!2.55e-30!7;CL:0002541!1.87e-25!3;CL:0002322!4.22e-15!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.90e-17;7!CL:0000586;2.90e-17;7!CL:0000083;1.70e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.90e-17,7;CL:0000586,2.90e-17,7;CL:0000083,1.70e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.73e-29;1!UBERON:0005425;2.73e-29;1!UBERON:0003056;1.04e-10;3 | |||
|ontology_enrichment_disease=DOID:1799!3.74e-10!1;DOID:10165!3.74e-10!1;DOID:1798!3.74e-10!1;DOID:3095!1.45e-09!22;DOID:2994!1.45e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:1799;7.48e-30;1!DOID:10165;7.48e-30;1!DOID:1798;7.48e-30;1!DOID:1793;1.70e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,7.48e-30,1;DOID:10165,7.48e-30,1;DOID:1798,7.48e-30,1;DOID:1793,1.70e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.87e-25!3;UBERON:0000920!1.87e-25!3;UBERON:0003124!2.46e-19!7;UBERON:0000473!5.10e-10!8;UBERON:0000941!5.31e-10!1;UBERON:0004904!5.31e-10!1;UBERON:0002464!5.31e-10!1;UBERON:0001021!5.31e-10!1;UBERON:0001785!5.31e-10!1;UBERON:0005631!9.03e-10!14;UBERON:0000158!9.03e-10!14;UBERON:0003135!2.04e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.73e-29;1!UBERON:0001785;2.73e-29;1!UBERON:0002464;2.73e-29;1!UBERON:0004904;2.73e-29;1!UBERON:0001021;2.73e-29;1!UBERON:0003714;2.21e-15;2!UBERON:0005162;2.21e-15;2!UBERON:0000122;2.21e-15;2!UBERON:0001987;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.37e-29,1;UBERON:0001785,2.37e-29,1;UBERON:0002464,2.37e-29,1;UBERON:0004904,2.37e-29,1;UBERON:0001021,2.37e-29,1;UBERON:0003902,2.37e-29,1;UBERON:0005425,2.37e-29,1;UBERON:0003714,2.05e-15,2;UBERON:0005162,2.05e-15,2;UBERON:0000122,2.05e-15,2;UBERON:0001781,2.26e-08,4;UBERON:0001987,2.61e-08,4;UBERON:0004340,2.61e-08,4 | |||
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|short_description=p@chr19:54183760..54183765,+ | |||
}} | }} |
Latest revision as of 17:01, 27 July 2015
Short description: | p@chr19:54183760..54183765, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54183760..54183765, + |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.90e-17 | 7 |
germ cell | 2.90e-17 | 7 |
epithelial cell of pancreas | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.37e-29 | 1 |
cranial nerve | 2.37e-29 | 1 |
nerve trunk | 2.37e-29 | 1 |
nerve connecting eye with brain | 2.37e-29 | 1 |
nerve | 2.37e-29 | 1 |
retinal neural layer | 2.37e-29 | 1 |
presumptive neural retina | 2.37e-29 | 1 |
neural tissue | 2.05e-15 | 2 |
multi cell component structure | 2.05e-15 | 2 |
neuron projection bundle | 2.05e-15 | 2 |
layer of retina | 2.26e-08 | 4 |
placenta | 2.61e-08 | 4 |
allantois | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 7.48e-30 | 1 |
endocrine pancreas cancer | 7.48e-30 | 1 |
pancreatic endocrine carcinoma | 7.48e-30 | 1 |
pancreatic cancer | 1.70e-08 | 4 |