FFCP PHASE1:Hg19::chr19:6361829..6361838,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:6361829..6361838,+ to FFCP PHASE1:Hg19::chr19:6361829..6361838,+: NSchange) |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:6361829..6361838,+ | |||
|description=CAGE_peak_at_chr19:6361829..6361838,+ | |||
|id=chr19:6361829..6361838,+ | |||
|ontology_enrichment_celltype=CL:0000183!6.81e-11!59;CL:0000055!1.05e-09!180;CL:0000187!1.34e-08!54;CL:0000393!1.56e-08!60;CL:0000211!1.56e-08!60;CL:0000680!7.40e-08!57;CL:0000056!7.40e-08!57;CL:0000355!7.40e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:1000746;9.49e-12;7!CL:1000612;9.49e-12;7!CL:0002681;4.54e-11;12!CL:0002584;4.54e-11;12!CL:0000669;4.64e-10;4!CL:1000449;1.52e-08;15!CL:0002188;7.00e-08;5!CL:1000497;2.32e-07;17!CL:0002518;2.32e-07;17!CL:0000346;5.07e-07;3!CL:1000428;5.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,1.62e-11,7;CL:1000612,1.62e-11,7;CL:0002681,6.15e-11,12;CL:0002584,6.15e-11,12;CL:0000669,8.88e-10,4;CL:1000449,1.92e-08,15;CL:0002188,7.06e-08,5;CL:0000346,1.42e-07,3;CL:1000428,1.42e-07,3;CL:1000497,2.83e-07,17;CL:0002518,2.83e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.85e-12!83;UBERON:0002329!7.85e-12!83;UBERON:0003077!7.85e-12!83;UBERON:0003059!7.85e-12!83;UBERON:0007282!7.85e-12!83;UBERON:0009618!7.85e-12!83;UBERON:0007285!7.85e-12!83;UBERON:0000119!9.25e-12!312;UBERON:0000481!1.43e-11!347;UBERON:0000483!2.49e-11!309;UBERON:0000486!7.07e-11!82;UBERON:0004290!1.88e-10!70;UBERON:0005256!3.14e-09!143;UBERON:0001134!1.52e-08!61;UBERON:0002036!1.52e-08!61;UBERON:0003082!1.52e-08!61;UBERON:0002385!9.73e-08!63;UBERON:0001015!9.73e-08!63;UBERON:0000383!9.73e-08!63;UBERON:0000475!2.28e-07!365;UBERON:0000477!3.82e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;9.49e-12;7!UBERON:0001229;9.49e-12;7!UBERON:0001225;4.54e-11;12!UBERON:0008987;4.54e-11;12!UBERON:0000353;9.91e-11;15!UBERON:0001851;1.52e-08;15!UBERON:0006555;1.52e-08;15!UBERON:0004819;1.52e-08;15!UBERON:0001285;1.52e-08;15!UBERON:0007684;1.52e-08;15!UBERON:0000412;5.07e-07;3!UBERON:0001992;5.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,1.62e-11,7;UBERON:0000074,1.62e-11,7;UBERON:0001229,1.62e-11,7;UBERON:0001230,1.62e-11,7;UBERON:0003220,1.62e-11,7;UBERON:0005749,1.62e-11,7;UBERON:0004199,1.62e-11,7;UBERON:0004209,1.62e-11,7;UBERON:0004198,1.62e-11,7;UBERON:0007503,4.55e-11,78;UBERON:0001225,6.15e-11,12;UBERON:0008987,6.15e-11,12;UBERON:0000353,1.16e-10,15;UBERON:0005103,5.69e-10,8;UBERON:0000083,5.69e-10,8;UBERON:0009201,5.69e-10,8;UBERON:0006553,5.69e-10,8;UBERON:0003074,5.69e-10,8;UBERON:0003060,5.69e-10,8;UBERON:0003104,9.27e-10,160;UBERON:0009142,9.27e-10,160;UBERON:0000080,9.07e-09,9;UBERON:0002120,9.07e-09,9;UBERON:0004875,9.07e-09,9;UBERON:0005721,9.07e-09,9;UBERON:0005754,9.07e-09,9;UBERON:0007297,9.07e-09,9;UBERON:0001851,1.92e-08,15;UBERON:0004211,1.92e-08,15;UBERON:0009773,1.92e-08,15;UBERON:0001231,1.92e-08,15;UBERON:0001285,1.92e-08,15;UBERON:0007684,1.92e-08,15;UBERON:0004208,1.92e-08,15;UBERON:0006555,8.03e-08,16;UBERON:0004819,8.03e-08,16;UBERON:0000412,1.42e-07,3;UBERON:0001992,1.42e-07,3;UBERON:0004876,5.06e-07,11;UBERON:0005256,8.17e-07,122 | |||
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| ||
|short_description=p@chr19:6361829..6361838,+ | |||
}} | }} |
Latest revision as of 18:04, 27 July 2015
Short description: | p@chr19:6361829..6361838, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6361829..6361838, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 1.62e-11 | 7 |
kidney corpuscule cell | 1.62e-11 | 7 |
kidney cortical cell | 6.15e-11 | 12 |
renal cortical epithelial cell | 6.15e-11 | 12 |
pericyte cell | 8.88e-10 | 4 |
epithelial cell of nephron | 1.92e-08 | 15 |
glomerular endothelial cell | 7.06e-08 | 5 |
hair follicle dermal papilla cell | 1.42e-07 | 3 |
stem cell of epidermis | 1.42e-07 | 3 |
kidney cell | 2.83e-07 | 17 |
kidney epithelial cell | 2.83e-07 | 17 |