FFCP PHASE1:Hg19::chr1:153600120..153600131,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:153600120..153600131,- to FFCP PHASE1:Hg19::chr1:153600120..153600131,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6284 | |EntrezGene=6284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10490 | |HGNC=10490 | ||
|TSSclassifier=strong | |||
|UniProt=Q99584 | |UniProt=Q99584 | ||
|association_with_transcript=-3bp_to_NM_001024211,uc001fch.2_5end | |||
|cluster_id=chr1:153600120..153600131,- | |||
|description=CAGE_peak_9_at_S100A13_5end | |||
|id=chr1:153600120..153600131,- | |||
|ontology_enrichment_celltype=CL:0000222!1.02e-18!119;CL:0000220!3.18e-18!246;CL:0002321!6.90e-18!248;CL:0002078!7.96e-16!44;CL:0000115!2.03e-13!35;CL:0000213!2.37e-10!57;CL:0000215!2.37e-10!57;CL:0000359!3.11e-10!32;CL:0002139!3.18e-10!24;CL:0000066!1.23e-09!254;CL:0000183!3.44e-09!59;CL:0000192!5.34e-09!42;CL:0000514!5.34e-09!42;CL:0000071!1.99e-08!18;CL:0002546!1.99e-08!18;CL:0000680!4.86e-08!57;CL:0000056!4.86e-08!57;CL:0000355!4.86e-08!57;CL:1000449!1.07e-07!16;CL:0002681!1.22e-07!13;CL:0002584!1.22e-07!13;CL:0000187!2.34e-07!54;CL:1000497!4.63e-07!18;CL:0002518!4.63e-07!18;CL:0000055!5.69e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.07e-14;36!CL:0002078;1.99e-13;45!CL:1000449;1.42e-12;15!CL:0002139;4.91e-12;24!CL:0002681;5.89e-12;12!CL:0002584;5.89e-12;12!CL:1000497;6.40e-12;17!CL:0002518;6.40e-12;17!CL:0000071;1.21e-09;18!CL:0000359;5.56e-09;32!CL:1000507;3.16e-08;10!CL:1000494;3.16e-08;10!CL:1000746;1.36e-07;7!CL:1000612;1.36e-07;7!CL:0000213;4.24e-07;58!CL:0000215;4.24e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,2.65e-19,45;CL:0000115,1.46e-17,36;CL:0000222,1.40e-15,121;CL:1000449,1.95e-12,15;CL:0002321,3.00e-12,250;CL:0002139,6.46e-12,24;CL:1000497,7.37e-12,17;CL:0002518,7.37e-12,17;CL:0002681,8.17e-12,12;CL:0002584,8.17e-12,12;CL:0000213,7.11e-11,58;CL:0000215,7.11e-11,58;CL:0000071,8.93e-10,18;CL:0002546,8.93e-10,18;CL:0000359,1.27e-09,32;CL:1000507,4.96e-08,10;CL:1000494,4.96e-08,10;CL:0000066,7.73e-08,253;CL:1000746,1.28e-07,7;CL:1000612,1.28e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;1.21e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!1.15e-18!309;UBERON:0000119!1.67e-18!312;UBERON:0000055!3.30e-17!69;UBERON:0004111!4.61e-17!241;UBERON:0002049!3.84e-16!79;UBERON:0007798!3.84e-16!79;UBERON:0000025!9.10e-16!194;UBERON:0003914!1.16e-15!118;UBERON:0001981!6.24e-15!60;UBERON:0007500!6.24e-15!60;UBERON:0004537!6.24e-15!60;UBERON:0006965!6.24e-15!60;UBERON:0000477!8.59e-14!286;UBERON:0004872!1.35e-13!84;UBERON:0001637!1.77e-13!42;UBERON:0003509!1.77e-13!42;UBERON:0004572!1.77e-13!42;UBERON:0000480!1.76e-11!626;UBERON:0000467!2.15e-11!625;UBERON:0000486!7.30e-11!82;UBERON:0000475!3.25e-10!365;UBERON:0005256!8.86e-10!143;UBERON:0001009!1.36e-09!113;UBERON:0004573!2.32e-09!33;UBERON:0004571!2.32e-09!33;UBERON:0000468!2.78e-09!659;UBERON:0000064!1.07e-08!219;UBERON:0004535!1.22e-08!110;UBERON:0004290!1.57e-08!70;UBERON:0000490!1.68e-08!138;UBERON:0001986!1.99e-08!18;UBERON:0004638!1.99e-08!18;UBERON:0004852!1.99e-08!18;UBERON:0000914!5.34e-08!83;UBERON:0002329!5.34e-08!83;UBERON:0003077!5.34e-08!83;UBERON:0003059!5.34e-08!83;UBERON:0007282!5.34e-08!83;UBERON:0009618!5.34e-08!83;UBERON:0007285!5.34e-08!83;UBERON:0006914!5.52e-08!25;UBERON:0002100!1.04e-07!216;UBERON:0000481!1.05e-07!347;UBERON:0004211!1.07e-07!16;UBERON:0001285!1.07e-07!16;UBERON:0007684!1.07e-07!16;UBERON:0003220!1.07e-07!16;UBERON:0004208!1.07e-07!16;UBERON:0001225!1.22e-07!13;UBERON:0008987!1.22e-07!13;UBERON:0000080!1.26e-07!18;UBERON:0002120!1.26e-07!18;UBERON:0004875!1.26e-07!18;UBERON:0005721!1.26e-07!18;UBERON:0005754!1.26e-07!18;UBERON:0007297!1.26e-07!18;UBERON:0006555!1.31e-07!17;UBERON:0005103!1.31e-07!17;UBERON:0000083!1.31e-07!17;UBERON:0009201!1.31e-07!17;UBERON:0004819!1.31e-07!17;UBERON:0006553!1.31e-07!17;UBERON:0003074!1.31e-07!17;UBERON:0003060!1.31e-07!17;UBERON:0000923!1.65e-07!604;UBERON:0005291!1.65e-07!604;UBERON:0006598!1.65e-07!604;UBERON:0002532!1.65e-07!604;UBERON:0002050!2.49e-07!605;UBERON:0005423!2.49e-07!605;UBERON:0000487!4.53e-07!22;UBERON:0002385!5.22e-07!63;UBERON:0001015!5.22e-07!63;UBERON:0000383!5.22e-07!63;UBERON:0001134!5.63e-07!61;UBERON:0002036!5.63e-07!61;UBERON:0003082!5.63e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.42e-12;15!UBERON:0004819;1.42e-12;15!UBERON:0001285;1.42e-12;15!UBERON:0007684;1.42e-12;15!UBERON:0001225;5.89e-12;12!UBERON:0008987;5.89e-12;12!UBERON:0003914;4.35e-11;74!UBERON:0007500;6.39e-11;56!UBERON:0001981;6.39e-11;56!UBERON:0004537;6.39e-11;56!UBERON:0001637;7.55e-11;42!UBERON:0003509;7.55e-11;42!UBERON:0004572;7.55e-11;42!UBERON:0000353;1.99e-10;15!UBERON:0004638;1.21e-09;18!UBERON:0001986;1.21e-09;18!UBERON:0004852;1.21e-09;18!UBERON:0000055;4.64e-09;65!UBERON:0001851;9.92e-09;15!UBERON:0006914;1.38e-08;25!UBERON:0004211;3.16e-08;10!UBERON:0009773;3.16e-08;10!UBERON:0001231;3.16e-08;10!UBERON:0004810;3.16e-08;10!UBERON:0000025;3.21e-08;93!UBERON:0000487;4.88e-08;22!UBERON:0004573;5.96e-08;33!UBERON:0004571;5.96e-08;33!UBERON:0006554;1.19e-07;30!UBERON:0001008;1.19e-07;30!UBERON:0000074;1.36e-07;7!UBERON:0001229;1.36e-07;7!UBERON:0002049;4.24e-07;75!UBERON:0007798;4.24e-07;75!UBERON:0002113;5.82e-07;24!UBERON:0011143;5.82e-07;24 | |||
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| ||
|short_description=p9@S100A13 | |||
}} | }} |
Latest revision as of 06:46, 17 September 2015
Short description: | p9@S100A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_S100A13_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_NM_001024211, uc001fch.2_5end |
EntrezGene: | S100A13 |
HGNC: | 10490 |
UniProt: | Q99584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 2.65e-19 | 45 |
endothelial cell | 1.46e-17 | 36 |
mesodermal cell | 1.40e-15 | 121 |
epithelial cell of nephron | 1.95e-12 | 15 |
embryonic cell | 3.00e-12 | 250 |
endothelial cell of vascular tree | 6.46e-12 | 24 |
kidney cell | 7.37e-12 | 17 |
kidney epithelial cell | 7.37e-12 | 17 |
kidney cortical cell | 8.17e-12 | 12 |
renal cortical epithelial cell | 8.17e-12 | 12 |
lining cell | 7.11e-11 | 58 |
barrier cell | 7.11e-11 | 58 |
blood vessel endothelial cell | 8.93e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.93e-10 | 18 |
vascular associated smooth muscle cell | 1.27e-09 | 32 |
kidney tubule cell | 4.96e-08 | 10 |
nephron tubule epithelial cell | 4.96e-08 | 10 |
epithelial cell | 7.73e-08 | 253 |
glomerular cell | 1.28e-07 | 7 |
kidney corpuscule cell | 1.28e-07 | 7 |