FFCP PHASE1:Hg19::chr1:159046480..159046489,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr1:159046480..159046489,- to FFCP PHASE1:Hg19::chr1:159046480..159046489,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9447 | |EntrezGene=9447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=357 | |HGNC=357 | ||
|TSSclassifier=strong | |||
|UniProt=O14862 | |UniProt=O14862 | ||
|association_with_transcript=157bp_to_NM_004833,uc001ftj.1_5end | |||
|cluster_id=chr1:159046480..159046489,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_3_at_AIM2_5end | |||
|id=chr1:159046480..159046489,- | |||
|ontology_enrichment_celltype=CL:0000542!3.72e-33!53;CL:0000051!3.72e-33!53;CL:0000945!5.60e-32!24;CL:0000826!5.60e-32!24;CL:0000838!1.45e-31!52;CL:0002087!1.16e-24!119;CL:0002031!6.50e-22!124;CL:0000738!1.35e-20!140;CL:0000988!1.75e-16!182;CL:0002032!8.83e-15!165;CL:0000837!8.83e-15!165;CL:0000037!1.01e-14!172;CL:0000566!1.01e-14!172;CL:0000236!3.81e-14!14;CL:0000080!8.95e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.42e-30;24!CL:0000542;8.41e-15;53!CL:0000236;1.53e-14;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.24e-30,24;CL:0000826,3.24e-30,24;CL:0000838,4.16e-21,52;CL:0000542,1.10e-20,53;CL:0000051,1.10e-20,53;CL:0000236,1.31e-13,14;CL:0000988,4.59e-11,177;CL:0002087,1.11e-10,115;CL:0002031,3.53e-10,120;CL:0000738,8.13e-09,136;CL:0002032,3.19e-07,161;CL:0000837,3.19e-07,161;CL:0000037,7.36e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000051;8.41e-15;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.85e-16!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.73e-19;10!DOID:3371;2.46e-13;1!DOID:4549;2.46e-13;1!DOID:5861;2.46e-13;1!DOID:6496;2.46e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.31e-19,10;DOID:3371,2.32e-13,1;DOID:4549,2.32e-13,1;DOID:5861,2.32e-13,1;DOID:6496,2.32e-13,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.73e-11;10!UBERON:0000178;7.89e-08;15!UBERON:0000179;7.89e-08;15!UBERON:0000463;7.89e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.73e-11,10;UBERON:0000358,1.73e-11,10;UBERON:0000307,1.73e-11,10;UBERON:0000091,1.73e-11,10;UBERON:0000087,1.73e-11,10;UBERON:0007010,1.73e-11,10;UBERON:0007806,1.73e-11,10;UBERON:0008780,1.73e-11,10;UBERON:0005728,1.73e-11,10;UBERON:0000178,7.89e-08,15;UBERON:0000179,7.89e-08,15;UBERON:0000463,7.89e-08,15 | |||
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| ||
|short_description=p3@AIM2 | |||
}} | }} |
Latest revision as of 22:13, 17 September 2015
Short description: | p3@AIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AIM2_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 157bp_to_NM_004833, uc001ftj.1_5end |
EntrezGene: | AIM2 |
HGNC: | 357 |
UniProt: | O14862 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.24e-30 | 24 |
pro-B cell | 3.24e-30 | 24 |
lymphoid lineage restricted progenitor cell | 4.16e-21 | 52 |
lymphocyte | 1.10e-20 | 53 |
common lymphoid progenitor | 1.10e-20 | 53 |
B cell | 1.31e-13 | 14 |
hematopoietic cell | 4.59e-11 | 177 |
nongranular leukocyte | 1.11e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.53e-10 | 120 |
leukocyte | 8.13e-09 | 136 |
hematopoietic oligopotent progenitor cell | 3.19e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.19e-07 | 161 |
hematopoietic stem cell | 7.36e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.73e-11 | 10 |
blastocyst | 1.73e-11 | 10 |
blastula | 1.73e-11 | 10 |
bilaminar disc | 1.73e-11 | 10 |
inner cell mass | 1.73e-11 | 10 |
cleaving embryo | 1.73e-11 | 10 |
connecting stalk | 1.73e-11 | 10 |
inner cell mass derived epiblast | 1.73e-11 | 10 |
extraembryonic mesoderm | 1.73e-11 | 10 |
blood | 7.89e-08 | 15 |
haemolymphatic fluid | 7.89e-08 | 15 |
organism substance | 7.89e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.31e-19 | 10 |
chondrosarcoma | 2.32e-13 | 1 |
extraosseous chondrosarcoma | 2.32e-13 | 1 |
myxoid chondrosarcoma | 2.32e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 2.32e-13 | 1 |