FFCP PHASE1:Hg19::chr1:183803112..183803116,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:183803112..183803116,+ to FFCP PHASE1:Hg19::chr1:183803112..183803116,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:183803112..183803116,+ | |||
|description=CAGE_peak_at_chr1:183803112..183803116,+ | |||
|id=chr1:183803112..183803116,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002619;2.08e-40;3!CL:0002535;6.35e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.56e-40,3;CL:0002535,9.19e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-24!115;UBERON:0001049!1.23e-24!57;UBERON:0005068!1.23e-24!57;UBERON:0006241!1.23e-24!57;UBERON:0007135!1.23e-24!57;UBERON:0002616!2.03e-20!59;UBERON:0002780!7.37e-20!41;UBERON:0001890!7.37e-20!41;UBERON:0006240!7.37e-20!41;UBERON:0001017!2.73e-19!82;UBERON:0003080!4.09e-19!42;UBERON:0002346!5.56e-19!90;UBERON:0000073!1.01e-18!94;UBERON:0001016!1.01e-18!94;UBERON:0000955!1.39e-18!69;UBERON:0006238!1.39e-18!69;UBERON:0005743!1.88e-18!86;UBERON:0003075!3.42e-17!86;UBERON:0007284!3.42e-17!86;UBERON:0002020!8.26e-16!34;UBERON:0003528!8.26e-16!34;UBERON:0001893!8.44e-16!34;UBERON:0002791!3.18e-15!33;UBERON:0001869!3.73e-14!32;UBERON:0003056!7.43e-14!61;UBERON:0002619!7.90e-11!22;UBERON:0000956!3.25e-10!25;UBERON:0000203!3.25e-10!25;UBERON:0001950!3.82e-09!20;UBERON:0000153!6.30e-09!129;UBERON:0007811!6.30e-09!129;UBERON:0000924!1.03e-08!173;UBERON:0006601!1.03e-08!173;UBERON:0000033!2.65e-08!123;UBERON:0004121!1.20e-07!169;UBERON:0002308!1.94e-07!9;UBERON:0000125!1.94e-07!9;UBERON:0000062!9.30e-07!511;UBERON:0003076!9.61e-07!15;UBERON:0003057!9.61e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001875;2.73e-27;2!UBERON:0006514;2.73e-27;2!UBERON:0002346;2.04e-14;4!UBERON:0000923;2.04e-14;4!UBERON:0010316;2.04e-14;4!UBERON:0005291;2.04e-14;4!UBERON:0002050;1.00e-11;5!UBERON:0005423;1.00e-11;5!UBERON:0001872;1.58e-11;5!UBERON:0001869;3.15e-09;32!UBERON:0002791;3.85e-09;32!UBERON:0002780;6.01e-09;41!UBERON:0001890;6.01e-09;41!UBERON:0009663;1.71e-08;7!UBERON:0003528;1.72e-08;34!UBERON:0002020;1.72e-08;34!UBERON:0001893;3.28e-08;34!UBERON:0001897;6.35e-08;2!UBERON:0001954;6.35e-08;2!UBERON:0003022;6.35e-08;2!UBERON:0006955;6.35e-08;2!UBERON:0004801;6.35e-08;2!UBERON:0002421;6.35e-08;2!UBERON:0010225;6.35e-08;2!UBERON:0002600;6.35e-08;2!UBERON:0002420;8.58e-07;9!UBERON:0000125;8.58e-07;9!UBERON:0007245;8.58e-07;9!UBERON:0002308;8.58e-07;9!UBERON:0010009;8.58e-07;9!UBERON:0010011;8.58e-07;9!UBERON:0000454;8.58e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001875,6.10e-27,2;UBERON:0006514,6.10e-27,2;UBERON:0001872,1.28e-11,5;UBERON:0002780,4.64e-11,41;UBERON:0001890,4.64e-11,41;UBERON:0003080,4.64e-11,41;UBERON:0006240,4.64e-11,41;UBERON:0002791,5.65e-10,32;UBERON:0001869,5.65e-10,32;UBERON:0003528,2.11e-09,34;UBERON:0002020,2.11e-09,34;UBERON:0001893,2.11e-09,34;UBERON:0002346,5.08e-09,86;UBERON:0000073,1.57e-08,53;UBERON:0002616,1.57e-08,53;UBERON:0009663,2.15e-08,7;UBERON:0001897,4.38e-08,2;UBERON:0010225,4.38e-08,2;UBERON:0001049,4.60e-08,56;UBERON:0005068,4.60e-08,56;UBERON:0006241,4.60e-08,56;UBERON:0007135,4.60e-08,56;UBERON:0001954,5.74e-08,2;UBERON:0003022,5.74e-08,2;UBERON:0002421,5.74e-08,2;UBERON:0002600,5.74e-08,2;UBERON:0006955,9.19e-08,2;UBERON:0004801,9.19e-08,2;UBERON:0003056,2.20e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,1.11957737119962,1.6194683300949,2.06060454107349,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0.929119112685311,0,0.256160706529101,0.236482229888585,0.689491361473237,0.645484683583826,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0.797854630486527,0.852449501065388,0,0,0,0,0,0.434377689410233,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0.541607727530031,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.221729397462564,0,0.589405839739707,0,0,0,0.174129737299267,0.664789802594326,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,1.47730203652438,0,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.41254749960294,0,0,0,0,0.154048617114644,0,0,0.537101224341368,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0.276283915531148,1.0077309914171,0.102268682502155,0.615424027305347,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.874813840149763,0.173624994933292,0,0.361789315876224,0,0.442317039724898,0.886642856860642,0,0,0,0.230850775511391,0,0.46112780877612,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.424059214301822,0,0,0.176915129006678,0.611030144933625,0.593042257361244,0.123563938946503,0,0.67401132980677,0,0.234264445725339,0,0,0,0.789168805698781,0,0.91821828489147,0.568679216656392,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0.0730893170861856,0,0,0,0,0,0,0.759729551470544,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.305994652908965,0,1.20084057741958,1.23214841002794,0,0,0,0,0.687481272035051,0,0,0,0,0.335917362433631,0,0,0.0787831823072236,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0.236417121897595,0.262272940674991,0,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0.171086837884329,0,0.106787412567695,1.25763444079733,0.828478110694391,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0.573409195690071,0.221858103073705,0.310482014706917,0,0,0.151649117541648,0,0,0.468334905806882,0,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0.327130788511688,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0.431299245586727,0.629063767423586,0,0.33946505990805,3.61377364172861,1.61116493536703,0,0,0.0788617450012534,0,0,0,0.385375350578757,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0.261906694481422,0,0,0.202612753855184,0.781078098613847,1.44680757550829,0.380494861163441,1.64092442705466,0,0.496211178389294,0,0.127762427639595,0,0.336283722218824,0.606965604236632,0.455324382702595,0,0.115233987555779,0,0.339848664884159,0.197318320688547,0,0,0.078493092850514,0.471346769748006,0,0.913158720509496,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0.198950775161368,0,0.45178432815584,0,0.301925687133347,0.0771741581079447,0.655678681511872,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0.187967835959707,0.386747327841463,0.799529247399431,0,0,0,0,0,0.430018749454354,0.157771562193185,0.135982980381829,0.872701380680755,0.5290268405154,0,0,0,0.126166424835079,0,0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| ||
|short_description=p@chr1:183803112..183803116,+ | |||
}} | }} |
Latest revision as of 01:17, 28 July 2015
Short description: | p@chr1:183803112..183803116, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183803112..183803116, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.56e-40 | 3 |
epithelial cell of cervix | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
globus pallidus | 6.10e-27 | 2 |
pallidum | 6.10e-27 | 2 |
parietal lobe | 1.28e-11 | 5 |
regional part of forebrain | 4.64e-11 | 41 |
forebrain | 4.64e-11 | 41 |
anterior neural tube | 4.64e-11 | 41 |
future forebrain | 4.64e-11 | 41 |
regional part of telencephalon | 5.65e-10 | 32 |
cerebral hemisphere | 5.65e-10 | 32 |
brain grey matter | 2.11e-09 | 34 |
gray matter | 2.11e-09 | 34 |
telencephalon | 2.11e-09 | 34 |
neurectoderm | 5.08e-09 | 86 |
regional part of nervous system | 1.57e-08 | 53 |
regional part of brain | 1.57e-08 | 53 |
telencephalic nucleus | 2.15e-08 | 7 |
dorsal plus ventral thalamus | 4.38e-08 | 2 |
thalamic complex | 4.38e-08 | 2 |
neural tube | 4.60e-08 | 56 |
neural rod | 4.60e-08 | 56 |
future spinal cord | 4.60e-08 | 56 |
neural keel | 4.60e-08 | 56 |
Ammon's horn | 5.74e-08 | 2 |
lobe parts of cerebral cortex | 5.74e-08 | 2 |
hippocampal formation | 5.74e-08 | 2 |
limbic lobe | 5.74e-08 | 2 |
uterine epithelium | 9.19e-08 | 2 |
cervix epithelium | 9.19e-08 | 2 |
pre-chordal neural plate | 2.20e-07 | 61 |