FFCP PHASE1:Hg19::chr1:212873084..212873137,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:212873084..212873137,- to FFCP PHASE1:Hg19::chr1:212873084..212873137,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55509 | |EntrezGene=55509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28915 | |HGNC=28915 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR55 | |UniProt=Q9NR55 | ||
|association_with_transcript=189bp_to_ENST00000243440,NM_018664,uc001hjl.1_5end | |||
|cluster_id=chr1:212873084..212873137,- | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_2_at_BATF3_5end | |||
|id=chr1:212873084..212873137,- | |||
|ontology_enrichment_celltype=CL:0002057!4.81e-22!42;CL:0000766!2.11e-21!76;CL:0000860!9.99e-20!45;CL:0002194!1.63e-19!63;CL:0000576!1.63e-19!63;CL:0000040!1.63e-19!63;CL:0000559!1.63e-19!63;CL:0002009!3.84e-18!65;CL:0000738!7.96e-17!140;CL:0000839!9.86e-17!70;CL:0000557!3.77e-16!71;CL:0002087!2.70e-15!119;CL:0000763!5.98e-14!112;CL:0000049!5.98e-14!112;CL:0000037!1.37e-12!172;CL:0000566!1.37e-12!172;CL:0002031!1.61e-12!124;CL:0002032!2.39e-12!165;CL:0000837!2.39e-12!165;CL:0000988!2.41e-12!182;CL:0002393!2.56e-08!9;CL:0002397!2.56e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;7.19e-16;48!CL:0000766;1.27e-14;69!CL:0000860;1.53e-14;33!CL:0002057;1.53e-14;33!CL:0002393;3.39e-13;6!CL:0002397;3.39e-13;6!CL:0000094;1.52e-11;8!CL:0000473;3.01e-11;39!CL:0000234;3.01e-11;39!CL:0000081;9.04e-11;11!CL:0000875;7.47e-08;3!CL:0002396;7.47e-08;3!CL:0000763;1.18e-07;100!CL:0002087;1.41e-07;104!CL:0000988;3.37e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.32e-34,72;CL:0000860,1.22e-30,42;CL:0002057,1.22e-30,42;CL:0000473,7.01e-28,48;CL:0000234,7.01e-28,48;CL:0000738,1.90e-27,136;CL:0002194,2.44e-26,59;CL:0000576,2.44e-26,59;CL:0000040,2.44e-26,59;CL:0000559,2.44e-26,59;CL:0000988,2.94e-25,177;CL:0002009,3.61e-25,61;CL:0000839,2.74e-24,66;CL:0000557,8.80e-24,67;CL:0000763,9.69e-24,108;CL:0000049,9.69e-24,108;CL:0000037,1.56e-23,168;CL:0002087,3.14e-23,115;CL:0002032,4.71e-23,161;CL:0000837,4.71e-23,161;CL:0002031,1.12e-20,120;CL:0002393,2.10e-19,9;CL:0002397,2.10e-19,9;CL:0000094,1.22e-11,8;CL:0000081,7.56e-11,11;CL:0000134,2.36e-08,354;CL:0002320,6.89e-08,361;CL:0000875,7.57e-08,3;CL:0002396,7.57e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.75e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.66e-24!102;UBERON:0003061!4.66e-24!102;UBERON:0002193!5.63e-20!112;UBERON:0002371!3.90e-16!80;UBERON:0001474!4.59e-15!86;UBERON:0004765!1.33e-12!101;UBERON:0001434!1.33e-12!101;UBERON:0007023!4.51e-10!115;UBERON:0002405!9.57e-10!115;UBERON:0000178!5.91e-08!15;UBERON:0000179!5.91e-08!15;UBERON:0000463!5.91e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.97e-12;15!UBERON:0000179;3.97e-12;15!UBERON:0000463;3.97e-12;15!UBERON:0002390;8.59e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.23e-34,98;UBERON:0003061,1.23e-34,98;UBERON:0002193,4.04e-30,108;UBERON:0002371,5.99e-23,76;UBERON:0002405,1.03e-20,93;UBERON:0001474,1.58e-20,82;UBERON:0004765,8.22e-18,90;UBERON:0001434,4.76e-15,100;UBERON:0003081,1.59e-13,203;UBERON:0000178,6.09e-12,15;UBERON:0000179,6.09e-12,15;UBERON:0000463,6.09e-12,15;UBERON:0002384,2.92e-07,371 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0.572471974262113,0,0.251085279189606,1.29902789771517,1.14940825229924,1.96776953284198,2.75354993794233,1.91914699048606,1.08371286321253,0,0,0,0,0,0,2.76997704265939,3.81034450193269,4.34021741431704,0,0.32389366601898,0.257575567634187,0,0.755751887377619,0.970336244751265,0.232429036905685,0.411167888021826,1.23882548358041,1.7261543539329,1.2808035326455,3.31075121844019,0.344745680736619,0.645484683583826,1.35426486594342,0.564727018627814,0.545812300115692,0.898893937780338,0.612167784741805,0.962787081228281,1.27867425159808,2.30895910130701,2.19410023383795,4.26224750532694,1.45104619314292,0.56738522469114,3.73693349397345,1.00499466102697,0.521482918420201,1.95469960234605,1.81619850790011,1.10483290796269,5.06339819905415,19.0129757680748,14.2444880976579,21.3851818418543,2.69588714751588,2.25265339262259,1.76798145366788,43.606949792411,24.4667512954881,31.9662269088109,0,0,0,0,0,0,0.661044872784862,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.222820913770347,0.294605907474837,0.443067789167242,0,0,0.130059347559878,0,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,17.2010118636982,17.7612332045253,17.4174928279713,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0.949265659568129,0.183201743930407,5.27121669744253,11.6334079244498,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0.624320153660641,0,0.448346041655403,0.469737994575059,0.485618833104395,0.280901613404497,0,0.491337269247072,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0.375355559615893,0,0,0.612975591598039,0.600952235626387,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,1.56449532329816,0,0,0,0,0.236613600079688,0.842923450390509,1.20505514941741,0.55146986366197,1.08939722046203,0.237270619111097,0.539325232640658,0.784885860501384,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0,0,0,0,0,0,2.16179930125442,0.12624243342638,0,0,0,0,0.411309970813294,0.300343057843917,0,0.672786506072164,0,0.1466765716419,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0,5.26800176769578,0.394061520403854,0,0,0.254094624222463,1.30139853857622,0,0.335032530668698,0.637938751653163,2.99602809578873,0,1.24324654030811,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0.413536052245775,1.07857100409308,1.60091336705167,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0.355123450626254,0.9033987161519,1.03850885836724,0.929683027679674,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0,0.309123034943167,0.183138929636687,0.330037999682352,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0,0,0,0.340906509664404,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.571890581771475,1.27948895655667,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0.404364963146632,1.58510321173008,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0,0,0.589494246078727,0,0,0,0,0.75894634753143,0.699869440489966,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,2.53723804616085,0,1.13929437434833,0.476463550915578,2.05681136543097,2.59389324477087,0.540031437238115,0.79312517629427,0.213648142254946,0,0,0,0,0.213425530045242,0.797131363644112,0.199579371432817,0,0.846694330895531,0,0,0.228234679033192,1.56679895773023,0,0.169291777801603,0,0,0,0.687010689511529,0.307240764308458,0.447352215784832,0.500547425135725,2.54004524022652,0,0,0,0,0,0,0.586032717087576,0,7.46670674659105,0,0.95497793895076,0,0,1.9882952955326,0.422008249231538,0,42.8490072989575,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0.615424027305347,0.622079175323615,0.179736702294654,0.179021174675609,1.02314474045374,0.591860433821602,7.18449277040819,0,0.969332746095218,0.185536196323703,0,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0.344743373241465,0,0.868124974666461,0.885741385813839,0.482385754501632,0,0.110579259931225,0,0.658156191461918,0,0,0.307801034015188,0.113942055847001,0,0.0897576444097721,0.217294743844016,2.87101043758728,0.549585560411174,2.66517388009317,0,1.41282230755522,0,0,0,0,0.569261198172555,0,0.210998064528027,0.326465616318295,0.141353071433941,0,0,0.353830258013357,0,69.6824652399462,93.5379017825027,78.0031962805752,0.337005664903385,0,0.234264445725339,0.547364367646998,0.3913292378641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| 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| ||
|short_description=p2@BATF3 | |||
}} | }} |
Latest revision as of 00:41, 25 September 2015
Short description: | p2@BATF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BATF3_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 189bp_to_ENST00000243440, NM_018664, uc001hjl.1_5end |
EntrezGene: | BATF3 |
HGNC: | 28915 |
UniProt: | Q9NR55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.23e-34 | 98 |
blood island | 1.23e-34 | 98 |
hemolymphoid system | 4.04e-30 | 108 |
bone marrow | 5.99e-23 | 76 |
immune system | 1.03e-20 | 93 |
bone element | 1.58e-20 | 82 |
skeletal element | 8.22e-18 | 90 |
skeletal system | 4.76e-15 | 100 |
lateral plate mesoderm | 1.59e-13 | 203 |
blood | 6.09e-12 | 15 |
haemolymphatic fluid | 6.09e-12 | 15 |
organism substance | 6.09e-12 | 15 |
connective tissue | 2.92e-07 | 371 |