FFCP PHASE1:Hg19::chr1:6640046..6640101,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:6640046..6640101,+ to FFCP PHASE1:Hg19::chr1:6640046..6640101,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3104 | |EntrezGene=3104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4930 | |HGNC=4930 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SY20,Q5SY21,P10074 | |UniProt=Q5SY20,Q5SY21,P10074 | ||
|association_with_transcript=0bp_to_ENST00000319084,ENST00000435905,NM_005341,uc001anx.2,uc009vmc.1,uc009vmd.1_5end | |||
|cluster_id=chr1:6640046..6640101,+ | |||
|description=CAGE_peak_1_at_ZBTB48_5end | |||
|id=chr1:6640046..6640101,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.77e-39!172;CL:0000566!5.77e-39!172;CL:0002032!6.68e-39!165;CL:0000837!6.68e-39!165;CL:0000988!1.80e-36!182;CL:0000738!2.60e-30!140;CL:0000763!1.80e-28!112;CL:0000049!1.80e-28!112;CL:0002031!1.05e-27!124;CL:0002087!1.19e-25!119;CL:0000766!8.01e-21!76;CL:0000557!1.97e-19!71;CL:0000839!2.16e-17!70;CL:0002009!8.80e-17!65;CL:0002194!7.47e-16!63;CL:0000576!7.47e-16!63;CL:0000040!7.47e-16!63;CL:0000559!7.47e-16!63;CL:0002057!8.52e-12!42;CL:0000860!2.03e-11!45;CL:0000838!1.41e-09!52;CL:0000542!1.80e-09!53;CL:0000051!1.80e-09!53 | |||
|ontology_enrichment_celltype_v019=CL:0000766;2.55e-09;69!CL:0000763;2.92e-09;100!CL:0000576;6.90e-09;48!CL:0000473;8.92e-08;39!CL:0000234;8.92e-08;39!CL:0000738;8.94e-08;136!CL:0000860;5.17e-07;33!CL:0002057;5.17e-07;33!CL:0002087;9.14e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.17e-39,168;CL:0002032,1.24e-39,161;CL:0000837,1.24e-39,161;CL:0000988,8.27e-38,177;CL:0000738,5.20e-31,136;CL:0000763,2.47e-29,108;CL:0000049,2.47e-29,108;CL:0002031,1.91e-28,120;CL:0002087,2.28e-26,115;CL:0000766,8.60e-22,72;CL:0000557,2.10e-20,67;CL:0000839,2.88e-18,66;CL:0002009,1.07e-17,61;CL:0002194,9.60e-17,59;CL:0000576,9.60e-17,59;CL:0000040,9.60e-17,59;CL:0000559,9.60e-17,59;CL:0000473,1.06e-13,48;CL:0000234,1.06e-13,48;CL:0000860,8.52e-12,42;CL:0002057,8.52e-12,42;CL:0000838,1.41e-09,52;CL:0000542,1.80e-09,53;CL:0000051,1.80e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000049;9.25e-09;108!CL:0002057;1.36e-08;42 | |||
|ontology_enrichment_disease=DOID:2531!9.17e-10!51;DOID:0060083!9.17e-10!51;DOID:1240!2.30e-09!39;DOID:8692!7.86e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.13e-08;31!DOID:1240;2.02e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.17e-10,51;DOID:0060083,9.17e-10,51;DOID:1240,2.30e-09,39;DOID:8692,7.86e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.21e-20!102;UBERON:0003061!2.21e-20!102;UBERON:0002193!3.83e-18!112;UBERON:0001474!5.94e-16!86;UBERON:0002371!2.47e-15!80;UBERON:0002405!4.68e-13!115;UBERON:0004765!9.87e-11!101;UBERON:0001434!9.87e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.66e-21,98;UBERON:0003061,4.66e-21,98;UBERON:0002193,1.12e-18,108;UBERON:0001474,1.39e-16,82;UBERON:0002371,5.45e-16,76;UBERON:0002405,1.28e-15,93;UBERON:0004765,1.34e-13,90;UBERON:0001434,1.09e-10,100 | |||
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| ||
|short_description=p1@ZBTB48 | |||
}} | }} |
Latest revision as of 23:42, 18 September 2015
Short description: | p1@ZBTB48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZBTB48_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000319084, ENST00000435905, NM_005341, uc001anx.2, uc009vmc.1, uc009vmd.1_5end |
EntrezGene: | ZBTB48 |
HGNC: | 4930 |
UniProt: | Q5SY20Q5SY21P10074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.17e-39 | 168 |
hematopoietic oligopotent progenitor cell | 1.24e-39 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-39 | 161 |
hematopoietic cell | 8.27e-38 | 177 |
leukocyte | 5.20e-31 | 136 |
myeloid cell | 2.47e-29 | 108 |
common myeloid progenitor | 2.47e-29 | 108 |
hematopoietic lineage restricted progenitor cell | 1.91e-28 | 120 |
nongranular leukocyte | 2.28e-26 | 115 |
myeloid leukocyte | 8.60e-22 | 72 |
granulocyte monocyte progenitor cell | 2.10e-20 | 67 |
myeloid lineage restricted progenitor cell | 2.88e-18 | 66 |
macrophage dendritic cell progenitor | 1.07e-17 | 61 |
monopoietic cell | 9.60e-17 | 59 |
monocyte | 9.60e-17 | 59 |
monoblast | 9.60e-17 | 59 |
promonocyte | 9.60e-17 | 59 |
defensive cell | 1.06e-13 | 48 |
phagocyte | 1.06e-13 | 48 |
classical monocyte | 8.52e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.52e-12 | 42 |
lymphoid lineage restricted progenitor cell | 1.41e-09 | 52 |
lymphocyte | 1.80e-09 | 53 |
common lymphoid progenitor | 1.80e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.66e-21 | 98 |
blood island | 4.66e-21 | 98 |
hemolymphoid system | 1.12e-18 | 108 |
bone element | 1.39e-16 | 82 |
bone marrow | 5.45e-16 | 76 |
immune system | 1.28e-15 | 93 |
skeletal element | 1.34e-13 | 90 |
skeletal system | 1.09e-10 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.17e-10 | 51 |
immune system cancer | 9.17e-10 | 51 |
leukemia | 2.30e-09 | 39 |
myeloid leukemia | 7.86e-09 | 31 |