FFCP PHASE1:Hg19::chr1:77997785..77997808,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:77997785..77997808,+ to FFCP PHASE1:Hg19::chr1:77997785..77997808,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26289 | |EntrezGene=26289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=365 | |HGNC=365 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIS7 | |UniProt=E9PIS7 | ||
|association_with_transcript=0bp_to_ENST00000478255_5end | |||
|cluster_id=chr1:77997785..77997808,+ | |||
|description=CAGE_peak_12_at_AK5_5end | |||
|id=chr1:77997785..77997808,+ | |||
|ontology_enrichment_celltype=CL:0002543!5.41e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002561;7.68e-21;2!CL:0002188;1.08e-17;5!CL:0002543;4.48e-15;6!CL:0002618;4.72e-14;3!CL:0002681;7.43e-13;12!CL:0002584;7.43e-13;12!CL:1000746;8.25e-13;7!CL:1000612;8.25e-13;7!CL:0000037;1.05e-10;1!CL:0001024;1.05e-10;1!CL:1000449;2.51e-10;15!CL:0000115;1.29e-09;36!CL:1000497;3.93e-09;17!CL:0002518;3.93e-09;17!CL:0002559;6.87e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,7.70e-21,2;CL:0002188,1.75e-17,5;CL:0002543,3.80e-15,6;CL:0002618,4.72e-14,3;CL:0002681,9.52e-13,12;CL:0002584,9.52e-13,12;CL:1000746,1.16e-12,7;CL:1000612,1.16e-12,7;CL:0000115,3.18e-12,36;CL:0001024,1.33e-10,1;CL:1000449,3.06e-10,15;CL:0002078,1.23e-09,45;CL:1000497,4.67e-09,17;CL:0002518,4.67e-09,17;CL:0002559,6.87e-09,5;CL:0000213,2.58e-07,58;CL:0000215,2.58e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002066!1.30e-09!5;UBERON:0001638!1.57e-09!9;UBERON:0003920!1.57e-09!9;UBERON:0004582!1.57e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;7.68e-21;2!UBERON:0005942;7.68e-21;2!UBERON:0005932;7.68e-21;2!UBERON:0001225;7.43e-13;12!UBERON:0008987;7.43e-13;12!UBERON:0000074;8.25e-13;7!UBERON:0001229;8.25e-13;7!UBERON:0001851;2.51e-10;15!UBERON:0006555;2.51e-10;15!UBERON:0000353;2.51e-10;15!UBERON:0004819;2.51e-10;15!UBERON:0001285;2.51e-10;15!UBERON:0007684;2.51e-10;15!UBERON:0001638;3.11e-10;9!UBERON:0003920;3.11e-10;9!UBERON:0004582;3.11e-10;9!UBERON:0002073;6.87e-09;5!UBERON:0002066;8.66e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,7.70e-21,2;UBERON:0005942,7.70e-21,2;UBERON:0005932,7.70e-21,2;UBERON:0001225,9.52e-13,12;UBERON:0008987,9.52e-13,12;UBERON:0010532,1.16e-12,7;UBERON:0000074,1.16e-12,7;UBERON:0001229,1.16e-12,7;UBERON:0001230,1.16e-12,7;UBERON:0003220,1.16e-12,7;UBERON:0005749,1.16e-12,7;UBERON:0004199,1.16e-12,7;UBERON:0004209,1.16e-12,7;UBERON:0004198,1.16e-12,7;UBERON:0005103,3.78e-11,8;UBERON:0000083,3.78e-11,8;UBERON:0009201,3.78e-11,8;UBERON:0006553,3.78e-11,8;UBERON:0003074,3.78e-11,8;UBERON:0003060,3.78e-11,8;UBERON:0001638,2.78e-10,9;UBERON:0003920,2.78e-10,9;UBERON:0004582,2.78e-10,9;UBERON:0001851,3.06e-10,15;UBERON:0004211,3.06e-10,15;UBERON:0009773,3.06e-10,15;UBERON:0000353,3.06e-10,15;UBERON:0001231,3.06e-10,15;UBERON:0001285,3.06e-10,15;UBERON:0007684,3.06e-10,15;UBERON:0004208,3.06e-10,15;UBERON:0000080,5.71e-10,9;UBERON:0002120,5.71e-10,9;UBERON:0004875,5.71e-10,9;UBERON:0005721,5.71e-10,9;UBERON:0005754,5.71e-10,9;UBERON:0007297,5.71e-10,9;UBERON:0006555,1.30e-09,16;UBERON:0004819,1.30e-09,16;UBERON:0002073,6.87e-09,5;UBERON:0005086,6.87e-09,5;UBERON:0002066,8.67e-09,5;UBERON:0004876,3.00e-08,11;UBERON:0003887,1.33e-07,12 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17440175733939,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0.393419540227666,0.393010762749165,0.205601498999509,0,0.651844533267181,1.89379122293893,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0.593146252648242,0.267540828089713,0,0.113309342697566,0,1.03088233644789,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0,5.62588288189703,3.59246996201872,0.563057402416611,1.53316637465883,0,0.366403487860815,0,0,0,0.993943903390637,0,0.397227542439656,0,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,17.6459812652152,25.2657818584355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07986957055916,0,0.115930404975077,0.117408694235822,0,0,1.33177906564219,0,0,0,0,0,0,0.16798212819886,0,0,1.45316969256981,0,0,0.352193736052904,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0.841980283299221,0,0,0,0,0.462629081407967,0,0,0,0.581051892299796,0,0.200506470303285,0,0,0,0,1.35359883872224,0.308061348417659,0,0,0,1.13733384070897,0.170093705276516,1.0795795805107,4.62681758070868,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.322260734604821,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09693213316207,0.511795582622668,0,0,0.78494864019923,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573645408816206,0.491245205065606,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8546724502987,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0.968440444553616,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0.947015026375446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06037423109676,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,1.33982065078089,1.65833887891756,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17440175733939,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0.393419540227666,0.393010762749165,0.205601498999509,0,0.651844533267181,1.89379122293893,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0.593146252648242,0.267540828089713,0,0.113309342697566,0,1.03088233644789,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0,5.62588288189703,3.59246996201872,0.563057402416611,1.53316637465883,0,0.366403487860815,0,0,0,0.993943903390637,0,0.397227542439656,0,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,17.6459812652152,25.2657818584355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07986957055916,0,0.115930404975077,0.117408694235822,0,0,1.33177906564219,0,0,0,0,0,0,0.16798212819886,0,0,1.45316969256981,0,0,0.352193736052904,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0.30239029332968,0.248107807818777,0.306923946576125,0.841980283299221,0,0,0,0,0.462629081407967,0,0,0,0.581051892299796,0,0.200506470303285,0,0,0,0,1.35359883872224,0.308061348417659,0,0,0,1.13733384070897,0.170093705276516,1.0795795805107,4.62681758070868,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.322260734604821,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09693213316207,0.511795582622668,0,0,0.78494864019923,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573645408816206,0.491245205065606,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.8546724502987,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0,0,0.968440444553616,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0.947015026375446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06037423109676,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,1.33982065078089,1.65833887891756,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@AK5 | |||
}} | }} |
Latest revision as of 07:09, 19 September 2015
Short description: | p12@AK5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_AK5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000478255_5end |
EntrezGene: | AK5 |
HGNC: | 365 |
UniProt: | E9PIS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 7.70e-21 | 2 |
glomerular endothelial cell | 1.75e-17 | 5 |
vein endothelial cell | 3.80e-15 | 6 |
endothelial cell of umbilical vein | 4.72e-14 | 3 |
kidney cortical cell | 9.52e-13 | 12 |
renal cortical epithelial cell | 9.52e-13 | 12 |
glomerular cell | 1.16e-12 | 7 |
kidney corpuscule cell | 1.16e-12 | 7 |
endothelial cell | 3.18e-12 | 36 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.33e-10 | 1 |
epithelial cell of nephron | 3.06e-10 | 15 |
meso-epithelial cell | 1.23e-09 | 45 |
kidney cell | 4.67e-09 | 17 |
kidney epithelial cell | 4.67e-09 | 17 |
hair follicle cell | 6.87e-09 | 5 |
lining cell | 2.58e-07 | 58 |
barrier cell | 2.58e-07 | 58 |