FFCP PHASE1:Hg19::chr1:86889894..86889905,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:86889894..86889905,+ to FFCP PHASE1:Hg19::chr1:86889894..86889905,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9635 | |EntrezGene=9635 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2016 | |HGNC=2016 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQC9,E7EUD9 | |UniProt=Q9UQC9,E7EUD9 | ||
|association_with_transcript=125bp_to_ENST00000370565,ENST00000439777,NM_006536,uc001dlr.3_5end | |||
|cluster_id=chr1:86889894..86889905,+ | |||
|coexpression_cluster_id=C2603 | |||
|description=CAGE_peak_5_at_CLCA2_5end | |||
|id=chr1:86889894..86889905,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.09e-24!43;CL:0002159!3.39e-21!13;CL:0000223!1.31e-17!59;CL:0000622!5.50e-15!5;CL:0002251!1.90e-14!21;CL:0000066!8.34e-13!254;CL:0002368!9.62e-13!13;CL:0000154!2.04e-12!6;CL:0002327!7.70e-12!4;CL:0002621!2.53e-10!3;CL:0002077!2.82e-10!33;CL:0002166!2.93e-10!3;CL:0002623!2.18e-09!3;CL:0000362!2.86e-09!8;CL:0000150!3.95e-08!9;CL:0000240!4.25e-08!6;CL:0000311!4.25e-08!6;CL:0000079!4.25e-08!6;CL:0000237!4.25e-08!6;CL:0000036!4.25e-08!6;CL:0000357!4.25e-08!6;CL:0000114!4.25e-08!6;CL:0000317!2.73e-07!2;CL:1000448!2.73e-07!2;CL:0002308!2.73e-07!2;CL:0002140!2.73e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000622;5.19e-27;5!CL:0002159;2.27e-24;14!CL:0000154;1.72e-22;6!CL:0002076;2.20e-18;42!CL:0002621;3.71e-18;3!CL:0002166;5.22e-18;3!CL:0002251;1.95e-16;20!CL:0002623;2.21e-16;3!CL:0000362;4.30e-15;9!CL:0000150;6.14e-15;9!CL:0000240;1.38e-14;6!CL:0000311;1.38e-14;6!CL:0000079;1.38e-14;6!CL:0000237;1.38e-14;6!CL:0002327;8.58e-13;4!CL:0000317;2.02e-12;2!CL:1000448;2.02e-12;2!CL:0002308;2.02e-12;2!CL:0002140;2.02e-12;2!CL:0002077;2.07e-12;34!CL:0000312;3.29e-10;5!CL:0002231;3.87e-08;3!CL:0002336;7.82e-07;1!CL:0002261;7.82e-07;1!CL:0002170;7.82e-07;1!CL:0002368;9.12e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,5.19e-27,5;CL:0002159,2.42e-24,14;CL:0000154,1.72e-22,6;CL:0002076,2.04e-22,42;CL:0002621,3.72e-18,3;CL:0002166,4.93e-18,3;CL:0002251,1.99e-16,20;CL:0002623,2.21e-16,3;CL:0000223,2.01e-15,58;CL:0000362,4.71e-15,9;CL:0000150,6.15e-15,9;CL:0000240,1.65e-14,6;CL:0000311,1.65e-14,6;CL:0000079,1.65e-14,6;CL:0000237,1.65e-14,6;CL:0000036,1.65e-14,6;CL:0000357,1.65e-14,6;CL:0000114,1.65e-14,6;CL:0002077,2.07e-14,34;CL:0002327,1.09e-12,4;CL:0000317,2.02e-12,2;CL:1000448,2.02e-12,2;CL:0002308,2.02e-12,2;CL:0002140,2.02e-12,2;CL:0000066,4.32e-11,253;CL:0000312,3.63e-10,5;CL:0002231,3.94e-08,3;CL:0002321,2.32e-07,250;CL:0000221,6.45e-07,72;CL:0002368,8.51e-07,13;CL:0002336,8.75e-07,1;CL:0002261,8.75e-07,1;CL:0002170,8.75e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;1.38e-14;6!CL:0000114;1.38e-14;6!CL:0000223;4.23e-08;58!UBERON:0008425;3.13e-07;1!UBERON:0009143;4.18e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;4.69e-07;1!DOID:3149;4.69e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.69e-07,1;DOID:3149,4.69e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!5.85e-18!72;UBERON:0000161!4.73e-17!35;UBERON:0000166!8.35e-15!21;UBERON:0003102!1.57e-13!95;UBERON:0004119!8.41e-13!169;UBERON:0000925!8.41e-13!169;UBERON:0006595!8.41e-13!169;UBERON:0000165!1.38e-12!28;UBERON:0000930!1.38e-12!28;UBERON:0001911!7.70e-12!4;UBERON:0005333!7.70e-12!4;UBERON:0008425!7.70e-12!4;UBERON:0005311!7.70e-12!4;UBERON:0000065!5.68e-11!53;UBERON:0001949!2.53e-10!3;UBERON:0001007!7.34e-10!155;UBERON:0001555!7.34e-10!155;UBERON:0007026!7.34e-10!155;UBERON:0001444!1.39e-08!48;UBERON:0005153!4.65e-08!37;UBERON:0001708!9.12e-08!4;UBERON:0001704!9.12e-08!4;UBERON:0000077!1.55e-07!130;UBERON:0004921!1.55e-07!129;UBERON:0004185!1.55e-07!129;UBERON:0005178!1.67e-07!34;UBERON:0002224!1.67e-07!34;UBERON:0002365!2.61e-07!31;UBERON:0002330!2.61e-07!31;UBERON:0002419!2.73e-07!2;UBERON:0007771!2.73e-07!2;UBERON:0003297!2.73e-07!2;UBERON:0001821!2.73e-07!2;UBERON:0003487!2.73e-07!2;UBERON:0001820!2.73e-07!2;UBERON:0005089!2.73e-07!2;UBERON:0005088!2.73e-07!2;UBERON:0005157!2.94e-07!51;UBERON:0005181!3.17e-07!35;UBERON:0001041!4.47e-07!98;UBERON:0001003!5.24e-07!14;UBERON:0007376!5.24e-07!14;UBERON:0007383!5.24e-07!14;UBERON:0003127!6.99e-07!2;UBERON:0003126!8.91e-07!7;UBERON:0001005!8.91e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.53e-21;28!UBERON:0001949;3.71e-18;3!UBERON:0000161;2.30e-17;19!UBERON:0000166;2.30e-17;19!UBERON:0001708;1.23e-13;4!UBERON:0008895;1.23e-13;4!UBERON:0001911;8.58e-13;4!UBERON:0002419;2.02e-12;2!UBERON:0007771;2.02e-12;2!UBERON:0003297;2.02e-12;2!UBERON:0001821;2.02e-12;2!UBERON:0003487;2.02e-12;2!UBERON:0001820;2.02e-12;2!UBERON:0011159;5.29e-11;5!UBERON:0003729;9.89e-11;13!UBERON:0010371;2.89e-10;31!UBERON:0002365;3.87e-10;31!UBERON:0002330;3.87e-10;31!UBERON:0000344;1.30e-09;20!UBERON:0001003;5.82e-09;15!UBERON:0007376;5.82e-09;15!UBERON:0001044;1.90e-08;6!UBERON:0003293;1.90e-08;6!UBERON:0003294;1.90e-08;6!UBERON:0010047;1.90e-08;6!UBERON:0003408;1.90e-08;6!UBERON:0000167;1.90e-08;6!UBERON:0001723;3.87e-08;3!UBERON:0001033;3.87e-08;3!UBERON:0003929;4.86e-08;7!UBERON:0007811;9.32e-08;52!UBERON:0003350;4.40e-07;8!UBERON:0001828;4.40e-07;8!UBERON:0001555;6.28e-07;54!UBERON:0002372;7.82e-07;1!UBERON:0001961;7.82e-07;1!UBERON:0001744;7.82e-07;1!UBERON:0001042;7.82e-07;1!UBERON:0001735;7.82e-07;1!UBERON:0000153;8.40e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,3.90e-23,22;UBERON:0003102,4.12e-22,99;UBERON:0000165,9.32e-21,29;UBERON:0000930,9.32e-21,29;UBERON:0000161,1.88e-19,36;UBERON:0001949,3.72e-18,3;UBERON:0000153,7.82e-17,62;UBERON:0007811,7.82e-17,62;UBERON:0000033,2.04e-16,56;UBERON:0001708,1.18e-13,4;UBERON:0008895,1.18e-13,4;UBERON:0001004,2.21e-13,74;UBERON:0001911,1.09e-12,4;UBERON:0005333,1.09e-12,4;UBERON:0008425,1.09e-12,4;UBERON:0005311,1.09e-12,4;UBERON:0002419,2.02e-12,2;UBERON:0007771,2.02e-12,2;UBERON:0003297,2.02e-12,2;UBERON:0001821,2.02e-12,2;UBERON:0003487,2.02e-12,2;UBERON:0001820,2.02e-12,2;UBERON:0005089,2.02e-12,2;UBERON:0005088,2.02e-12,2;UBERON:0001444,2.00e-11,49;UBERON:0011159,5.12e-11,5;UBERON:0003729,1.01e-10,13;UBERON:0002365,5.77e-10,31;UBERON:0002330,5.77e-10,31;UBERON:0000344,1.30e-09,20;UBERON:0010188,2.97e-09,6;UBERON:0002539,2.97e-09,6;UBERON:0008816,2.97e-09,6;UBERON:0001003,6.13e-09,15;UBERON:0007376,6.13e-09,15;UBERON:0007383,6.13e-09,15;UBERON:0001044,1.90e-08,6;UBERON:0003293,1.90e-08,6;UBERON:0003294,1.90e-08,6;UBERON:0010047,1.90e-08,6;UBERON:0000167,1.90e-08,6;UBERON:0001723,3.41e-08,3;UBERON:0001033,3.41e-08,3;UBERON:0010056,3.41e-08,3;UBERON:0004119,4.11e-08,160;UBERON:0000925,4.11e-08,160;UBERON:0006595,4.11e-08,160;UBERON:0008814,1.24e-07,18;UBERON:0002530,2.38e-07,59;UBERON:0004121,3.40e-07,171;UBERON:0000924,3.40e-07,171;UBERON:0006601,3.40e-07,171;UBERON:0003350,4.40e-07,8;UBERON:0001828,4.40e-07,8;UBERON:0002372,7.39e-07,1;UBERON:0001961,7.39e-07,1;UBERON:0001744,7.39e-07,1;UBERON:0001735,7.39e-07,1 | |||
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| ||
|short_description=p5@CLCA2 | |||
}} | }} |
Latest revision as of 14:21, 19 September 2015
Short description: | p5@CLCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CLCA2_5end |
Coexpression cluster: | C2603_breast_Mallassezderived_Gingival_Sebocyte_Keratinocyte_keratoacanthoma_Prostate |
Association with transcript: | 125bp_to_ENST00000370565, ENST00000439777, NM_006536, uc001dlr.3_5end |
EntrezGene: | CLCA2 |
HGNC: | 2016 |
UniProt: | Q9UQC9E7EUD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.69e-07 | 1 |
keratoacanthoma | 4.69e-07 | 1 |