FFCP PHASE1:Hg19::chr20:54987084..54987106,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57091 | |EntrezGene=57091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15878 | |HGNC=15878 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQ75,B4DII4 | |UniProt=Q9NQ75,B4DII4 | ||
|association_with_transcript=-61bp_to_ENST00000360314,NM_001164116,uc002xxp.2_5end | |||
|cluster_id=chr20:54987084..54987106,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_9_at_CASS4_5end | |||
|id=chr20:54987084..54987106,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.48e-15!5;CL:0000457!1.48e-15!5;CL:0002191!1.48e-15!5;CL:0000097!1.48e-15!5;CL:0000831!1.48e-15!5;CL:0002028!1.48e-15!5;CL:0000163!2.08e-08!9;CL:0000763!2.46e-07!112;CL:0000049!2.46e-07!112;CL:0000771!3.25e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000097;8.04e-123;5!CL:0000163;1.51e-68;9!CL:0000771;4.54e-50;2!CL:0000151;5.11e-16;36!CL:0000094;2.27e-13;8!CL:0000081;5.41e-10;11!CL:0000766;1.07e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.05e-123,5;CL:0002028,8.05e-123,5;CL:0000163,1.51e-68,9;CL:0000771,4.00e-50,2;CL:0000151,1.75e-17,36;CL:0000766,1.14e-16,72;CL:0000763,1.54e-14,108;CL:0000049,1.54e-14,108;CL:0000094,2.20e-13,8;CL:0000081,5.29e-10,11;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000839,1.63e-09,66;CL:0000557,2.23e-09,67;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177;CL:0000738,6.97e-09,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.65e-08,76;UBERON:0001474,1.03e-07,82;UBERON:0004765,4.76e-07,90;UBERON:0002405,7.92e-07,93 | |||
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| ||
|short_description=p9@CASS4 | |||
}} | }} |
Latest revision as of 03:04, 17 September 2015
Short description: | p9@CASS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CASS4_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -61bp_to_ENST00000360314, NM_001164116, uc002xxp.2_5end |
EntrezGene: | CASS4 |
HGNC: | 15878 |
UniProt: | Q9NQ75B4DII4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.05e-123 | 5 |
basophil mast progenitor cell | 8.05e-123 | 5 |
endocrine cell | 1.51e-68 | 9 |
eosinophil | 4.00e-50 | 2 |
secretory cell | 1.75e-17 | 36 |
myeloid leukocyte | 1.14e-16 | 72 |
myeloid cell | 1.54e-14 | 108 |
common myeloid progenitor | 1.54e-14 | 108 |
granulocyte | 2.20e-13 | 8 |
blood cell | 5.29e-10 | 11 |
hematopoietic oligopotent progenitor cell | 9.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.03e-10 | 161 |
myeloid lineage restricted progenitor cell | 1.63e-09 | 66 |
granulocyte monocyte progenitor cell | 2.23e-09 | 67 |
hematopoietic stem cell | 2.31e-09 | 168 |
hematopoietic cell | 6.97e-09 | 177 |
leukocyte | 6.97e-09 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.65e-08 | 76 |
bone element | 1.03e-07 | 82 |
skeletal element | 4.76e-07 | 90 |
immune system | 7.92e-07 | 93 |