FFCP PHASE1:Hg19::chr22:50354104..50354157,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:50354104..50354157,+ to FFCP PHASE1:Hg19::chr22:50354104..50354157,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=415116 | |EntrezGene=415116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19310 | |HGNC=19310 | ||
|TSSclassifier=strong | |||
|UniProt=Q86V86 | |UniProt=Q86V86 | ||
|association_with_transcript=0bp_to_NM_001001852,uc003bjb.2_5end | |||
|cluster_id=chr22:50354104..50354157,+ | |||
|coexpression_cluster_id=C448 | |||
|description=CAGE_peak_2_at_PIM3_5end | |||
|id=chr22:50354104..50354157,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.21e-24!140;CL:0000988!5.62e-22!182;CL:0000037!6.93e-22!172;CL:0000566!6.93e-22!172;CL:0002032!7.18e-19!165;CL:0000837!7.18e-19!165;CL:0002087!2.05e-17!119;CL:0002031!2.66e-17!124;CL:0002057!2.04e-15!42;CL:0000766!4.24e-15!76;CL:0000860!3.36e-13!45;CL:0000763!1.71e-12!112;CL:0000049!1.71e-12!112;CL:0000557!2.54e-12!71;CL:0002009!2.27e-11!65;CL:0002194!1.57e-10!63;CL:0000576!1.57e-10!63;CL:0000040!1.57e-10!63;CL:0000559!1.57e-10!63;CL:0000839!1.88e-10!70;CL:0000219!1.70e-08!390;CL:0000034!2.51e-07!444;CL:0000134!3.67e-07!358;CL:0002320!4.12e-07!365;CL:0000003!7.46e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.23e-10;48!CL:0000860;2.52e-10;33!CL:0002057;2.52e-10;33!CL:0000766;1.21e-09;69!CL:0000473;3.92e-08;39!CL:0000234;3.92e-08;39!CL:0002087;1.29e-07;104!CL:0000094;6.38e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.69e-27,136;CL:0000037,8.03e-24,168;CL:0000988,1.07e-23,177;CL:0002032,1.15e-20,161;CL:0000837,1.15e-20,161;CL:0002087,3.15e-19,115;CL:0002031,3.72e-19,120;CL:0000766,9.03e-18,72;CL:0000860,1.72e-15,42;CL:0002057,1.72e-15,42;CL:0000557,9.52e-15,67;CL:0000763,1.81e-14,108;CL:0000049,1.81e-14,108;CL:0000473,3.56e-14,48;CL:0000234,3.56e-14,48;CL:0002009,1.08e-13,61;CL:0002194,8.92e-13,59;CL:0000576,8.92e-13,59;CL:0000040,8.92e-13,59;CL:0000559,8.92e-13,59;CL:0000839,1.23e-12,66;CL:0000219,5.12e-09,386;CL:0000134,1.16e-07,354;CL:0000034,1.25e-07,441;CL:0002320,1.32e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;9.45e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-09!80;UBERON:0001474!2.38e-09!86;UBERON:0002390!7.63e-09!102;UBERON:0003061!7.63e-09!102;UBERON:0003081!1.90e-08!216;UBERON:0002193!3.15e-08!112;UBERON:0002405!5.19e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-11,76;UBERON:0001474,1.94e-11,82;UBERON:0002390,1.96e-10,98;UBERON:0003061,1.96e-10,98;UBERON:0002193,1.33e-09,108;UBERON:0004765,1.33e-09,90;UBERON:0003081,2.67e-09,203;UBERON:0002405,3.12e-09,93;UBERON:0001434,1.21e-07,100 | |||
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| ||
|short_description=p2@PIM3 | |||
}} | }} |
Latest revision as of 17:49, 15 September 2015
Short description: | p2@PIM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PIM3_5end |
Coexpression cluster: | C448_Eosinophils_CD19_Neutrophils_immature_CD14_CD34_CD4 |
Association with transcript: | 0bp_to_NM_001001852, uc003bjb.2_5end |
EntrezGene: | PIM3 |
HGNC: | 19310 |
UniProt: | Q86V86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.69e-27 | 136 |
hematopoietic stem cell | 8.03e-24 | 168 |
hematopoietic cell | 1.07e-23 | 177 |
hematopoietic oligopotent progenitor cell | 1.15e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-20 | 161 |
nongranular leukocyte | 3.15e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 3.72e-19 | 120 |
myeloid leukocyte | 9.03e-18 | 72 |
classical monocyte | 1.72e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.72e-15 | 42 |
granulocyte monocyte progenitor cell | 9.52e-15 | 67 |
myeloid cell | 1.81e-14 | 108 |
common myeloid progenitor | 1.81e-14 | 108 |
defensive cell | 3.56e-14 | 48 |
phagocyte | 3.56e-14 | 48 |
macrophage dendritic cell progenitor | 1.08e-13 | 61 |
monopoietic cell | 8.92e-13 | 59 |
monocyte | 8.92e-13 | 59 |
monoblast | 8.92e-13 | 59 |
promonocyte | 8.92e-13 | 59 |
myeloid lineage restricted progenitor cell | 1.23e-12 | 66 |
motile cell | 5.12e-09 | 386 |
mesenchymal cell | 1.16e-07 | 354 |
stem cell | 1.25e-07 | 441 |
connective tissue cell | 1.32e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-11 | 76 |
bone element | 1.94e-11 | 82 |
hematopoietic system | 1.96e-10 | 98 |
blood island | 1.96e-10 | 98 |
hemolymphoid system | 1.33e-09 | 108 |
skeletal element | 1.33e-09 | 90 |
lateral plate mesoderm | 2.67e-09 | 203 |
immune system | 3.12e-09 | 93 |
skeletal system | 1.21e-07 | 100 |