FFCP PHASE1:Hg19::chr2:119604456..119604501,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:119604456..119604501,- to FFCP PHASE1:Hg19::chr2:119604456..119604501,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2019 | |EntrezGene=2019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3342 | |HGNC=3342 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=249bp_to_BC111840_5end | |||
|cluster_id=chr2:119604456..119604501,- | |||
|description=CAGE_peak_2_at_EN1_5end | |||
|id=chr2:119604456..119604501,- | |||
|ontology_enrichment_celltype=CL:0000055!7.68e-29!180;CL:0000057!2.88e-22!75;CL:0002620!1.57e-16!23;CL:0002334!1.98e-12!12;CL:0000136!2.01e-09!15;CL:0000680!5.78e-09!57;CL:0000056!5.78e-09!57;CL:0000355!5.78e-09!57;CL:0002570!7.24e-09!8;CL:0000188!6.85e-08!9;CL:0000187!1.57e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.59e-22;23!CL:0002334;1.05e-19;12!CL:0002570;8.15e-14;8!CL:0000057;2.00e-12;73!CL:0000188;2.75e-12;9!CL:0000680;4.78e-10;7!CL:0000136;1.59e-09;13!CL:0002551;2.10e-09;6!CL:0002559;1.20e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.47e-28,76;CL:0002620,8.63e-23,23;CL:0002334,8.78e-20,12;CL:0002570,8.29e-14,8;CL:0000188,3.56e-12,9;CL:0000136,6.21e-12,15;CL:0000723,1.94e-09,433;CL:0002551,2.50e-09,6;CL:0000048,5.13e-09,427;CL:0000034,7.46e-09,441;CL:0002559,1.21e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!9.45e-21!45;UBERON:0002416!9.45e-21!45;UBERON:0002097!2.74e-18!40;UBERON:0000914!1.72e-16!83;UBERON:0002329!1.72e-16!83;UBERON:0003077!1.72e-16!83;UBERON:0003059!1.72e-16!83;UBERON:0007282!1.72e-16!83;UBERON:0009618!1.72e-16!83;UBERON:0007285!1.72e-16!83;UBERON:0004290!4.80e-15!70;UBERON:0003102!3.55e-14!95;UBERON:0000486!7.96e-13!82;UBERON:0001013!1.77e-11!14;UBERON:0000475!1.99e-11!365;UBERON:0001134!6.89e-10!61;UBERON:0002036!6.89e-10!61;UBERON:0003082!6.89e-10!61;UBERON:0002385!3.29e-09!63;UBERON:0001015!3.29e-09!63;UBERON:0000383!3.29e-09!63;UBERON:0002067!1.54e-08!9;UBERON:0004016!1.54e-08!9;UBERON:0010083!1.54e-08!9;UBERON:0002100!2.51e-08!216;UBERON:0003688!4.04e-07!6;UBERON:0002358!4.04e-07!6;UBERON:0003684!4.04e-07!6;UBERON:0001178!4.04e-07!6;UBERON:0005256!8.61e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.02e-18;14!UBERON:0002199;1.43e-18;46!UBERON:0002416;1.43e-18;46!UBERON:0002097;1.42e-17;41!UBERON:0003102;1.11e-15;50!UBERON:0002067;2.58e-13;9!UBERON:0001134;2.60e-13;16!UBERON:0002036;2.60e-13;16!UBERON:0003688;4.59e-11;6!UBERON:0002358;4.59e-11;6!UBERON:0003684;4.59e-11;6!UBERON:0001178;4.59e-11;6!UBERON:0004457;5.87e-09;9!UBERON:0000042;5.87e-09;9!UBERON:0002073;1.20e-08;5!UBERON:0002385;2.81e-08;31!UBERON:0001015;2.81e-08;31!UBERON:0000383;2.81e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,6.07e-29,46;UBERON:0002416,6.07e-29,46;UBERON:0002097,1.35e-24,41;UBERON:0001013,1.31e-18,14;UBERON:0003102,2.16e-13,99;UBERON:0002067,2.94e-13,9;UBERON:0004016,2.94e-13,9;UBERON:0010083,2.94e-13,9;UBERON:0002329,4.42e-11,71;UBERON:0003059,4.42e-11,71;UBERON:0007282,4.42e-11,71;UBERON:0004290,4.42e-11,71;UBERON:0009618,4.42e-11,71;UBERON:0003688,6.87e-11,6;UBERON:0002358,6.87e-11,6;UBERON:0003684,6.87e-11,6;UBERON:0001178,6.87e-11,6;UBERON:0003077,8.15e-11,72;UBERON:0007285,8.15e-11,72;UBERON:0007524,1.47e-10,73;UBERON:0000486,8.93e-10,83;UBERON:0007503,2.23e-09,78;UBERON:0002073,1.21e-08,5;UBERON:0005086,1.21e-08,5;UBERON:0002384,8.03e-08,371 | |||
|phase1_expression=8.53888382571616,5.56661362116556,8.45726424575827,5.00366491765652,4.02264984984559,4.36169262050184,0,5.05375898741465,3.13422753839806,0,0,0,0,0.74259811776028,0.331397375727916,0.672325146451775,2.41077811209591,1.46062018077475,0.487932798790507,2.21617904538218,2.65200898617529,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0,0,0.579386075843295,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44852317882041,2.27934920996244,1.72131935057184,0.573673241497627,1.77334191099179,0,0,0,0,0,0,0,0,5.38939293217732,5.30672130611545,2.2818872861778,3.28787097213962,2.58355897016283,3.56120477609889,3.37081936085396,0,0,0,2.37600571456411,2.71993622206413,11.8320977051943,12.9351265526923,0.168336113954066,0.625592599359821,0,0.877955241761676,4.90380473278431,5.25833206173089,0.113432183160021,2.87023417102179,5.97960688691989,4.4505699243508,0.900273288253207,2.88547081867629,3.34932702059318,3.53622027030021,3.37552664482532,4.87185025805993,1.7670364197088,3.95814564161887,3.39456719319505,2.13005755509969,2.61955455391865,0.67824236924195,0,0,0,0,0,0.116193942869518,0,0,0,4.69348596989448,5.78916844373597,1.38134921352481,7.89425477654364,4.33127689001751,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0.441463099414651,0,0,0,0,1.10581869652794,0,0.977424915930974,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.2933531432838,0.129271715757778,25.0359512096318,2.535908257668,0,0,0.257207374262142,0,0,0,0.542621605391443,1.64648067356154,6.18898750158097,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,3.18518874668674,2.05476322550383,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,2.08575535922538,3.50119364741774,4.6115054028955,0.831883446123229,1.96271887676878,1.41932173530541,0.819989904948992,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,8.43566546583841,4.75732117192994,11.507063871756,6.27881831352935,7.16390148693385,4.02134802859019,4.45254199334973,5.5515489768956,4.79416658345443,4.18848495670427,3.63478100428535,3.83494248917865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64825036673018,1.98022799809411,0.574265537996172,0,0,3.19013370364003,2.7728751080636,2.30255512089194,3.1702411671442,3.54486808065303,2.32026710262766,4.17610474338894,1.69160867728801,0,0,0,0,0.929691098594572,0.62962469366128,0,0.308033580176089,2.12922412126809,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0.235624804691373,2.02182481573316,0,2.94880919367287,0,0.731140468893853,0,0,0,5.65040583101214,0.551365343546124,0,0,0.578775534266688,0.655894752046633,0,0,2.53526042279017,0.573645408816206,0.196498082026242,0,0,1.26664581178598,0.987884678879706,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0.121360521749513,0,0.284136146806413,0,0.296964680832639,0,0,0,0,0,0,0,0,0,10.9427490277306,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0.1137934482855,0,0.472775363535873,0,0,0.520874984799877,0,0,0,0,0,0,0,1.53366118706464,0,2.62066728448103,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,0.450970258243478,0.622129148383483,0,0,0.313932918407225,0,0,0,0,3.62571870433197,0,0,0,0,0,0,0.0969890164884194,0.970817393606503,0,0,0,0,1.36885967914362,0,0,0,0,0,0,0,0,0.235694034616795,0.815425236441684,0.418411385249333,1.83596791745379,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,1.57483970423598,0,0,0,0,0,0,0,0,0,2.68347750079413,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,5.62280471891892,0,0,0,0.258565912723101,0.52893040697076,0.171086837884329,0,0,0,0,0.496166021811951,0,0,1.91502377331055,0.544017803369474,0.5013797880454,0,1.31149052283922,0,0,0,0,0,0,0.124192805882767,0.691743174681154,0.124980407962107,0,0.856396000634902,5.88164549245429,0,2.02889440055155,5.52242770681434,8.88110577419453,5.54805861502613,0.189403005275089,0,0,0.457680136793847,0.604923695052956,1.86524640699337,0.295710299979268,0.159296767163702,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0.150257608997218,0,0.406870733204662,0,0,0,0,2.40016658797892,4.46414416737631,4.37774335395695,0,0,0,0.260994291965212,0.226705925512272,0,0.489473409012935,0,0.308801447160972,3.28926074368061,0.706756583783524,0,0,0,0,0,0,0,0,0,2.94848863961771,0,0,0,0,0,0,1.84105950251841,0,0,0,6.46948868380091,0.629063767423586,0,0,0.212574920101683,0.371807292777007,0,2.54403480522735,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,0.183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| ||
|short_description=p2@EN1 | |||
}} | }} |
Latest revision as of 16:17, 16 September 2015
Short description: | p2@EN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 249bp_to_BC111840_5end |
EntrezGene: | EN1 |
HGNC: | 3342 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.47e-28 | 76 |
skin fibroblast | 8.63e-23 | 23 |
preadipocyte | 8.78e-20 | 12 |
mesenchymal stem cell of adipose | 8.29e-14 | 8 |
cell of skeletal muscle | 3.56e-12 | 9 |
fat cell | 6.21e-12 | 15 |
somatic stem cell | 1.94e-09 | 433 |
fibroblast of dermis | 2.50e-09 | 6 |
multi fate stem cell | 5.13e-09 | 427 |
stem cell | 7.46e-09 | 441 |
hair follicle cell | 1.21e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
integument | 6.07e-29 | 46 |
integumental system | 6.07e-29 | 46 |
skin of body | 1.35e-24 | 41 |
adipose tissue | 1.31e-18 | 14 |
surface structure | 2.16e-13 | 99 |
dermis | 2.94e-13 | 9 |
dermatome | 2.94e-13 | 9 |
future dermis | 2.94e-13 | 9 |
somite | 4.42e-11 | 71 |
presomitic mesoderm | 4.42e-11 | 71 |
presumptive segmental plate | 4.42e-11 | 71 |
dermomyotome | 4.42e-11 | 71 |
trunk paraxial mesoderm | 4.42e-11 | 71 |
omentum | 6.87e-11 | 6 |
peritoneum | 6.87e-11 | 6 |
abdominal cavity | 6.87e-11 | 6 |
visceral peritoneum | 6.87e-11 | 6 |
paraxial mesoderm | 8.15e-11 | 72 |
presumptive paraxial mesoderm | 8.15e-11 | 72 |
dense mesenchyme tissue | 1.47e-10 | 73 |
multilaminar epithelium | 8.93e-10 | 83 |
epithelial vesicle | 2.23e-09 | 78 |
hair follicle | 1.21e-08 | 5 |
hair follicle placode | 1.21e-08 | 5 |
connective tissue | 8.03e-08 | 371 |