FFCP PHASE1:Hg19::chr2:151326151..151326158,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:151326151..151326158,- to FFCP PHASE1:Hg19::chr2:151326151..151326158,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:151326151..151326158,- | |||
|coexpression_cluster_id=C2662 | |||
|description=CAGE_peak_at_chr2:151326151..151326158,- | |||
|id=chr2:151326151..151326158,- | |||
|ontology_enrichment_celltype=CL:0000055!8.79e-23!180;CL:0000220!8.86e-17!246;CL:0002321!1.03e-16!248;CL:0000057!3.14e-15!75;CL:0000548!1.40e-09!679;CL:0000004!1.40e-09!679;CL:0000255!1.40e-09!679;CL:0000012!6.71e-09!682;CL:0000393!8.58e-09!60;CL:0000211!8.58e-09!60;CL:0000680!9.15e-09!57;CL:0000056!9.15e-09!57;CL:0000355!9.15e-09!57;CL:0002620!1.01e-08!23;CL:0000066!6.04e-08!254;CL:0000222!8.14e-08!119;CL:0000187!8.48e-08!54;CL:0000192!1.58e-07!42;CL:0000514!1.58e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.77e-09;55!CL:0002620;5.31e-09;23!CL:0000048;7.29e-09;58!CL:0000723;5.27e-08;61!CL:0000077;2.93e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.29e-16,76;CL:0002321,1.43e-14,250;CL:0002620,4.01e-09,23;CL:0000393,1.38e-08,61;CL:0000211,1.38e-08,61;CL:0000680,1.56e-08,58;CL:0000056,1.56e-08,58;CL:0000355,1.56e-08,58;CL:0000187,1.62e-07,55;CL:0000192,2.81e-07,43;CL:0000514,2.81e-07,43;CL:0000077,3.25e-07,19;CL:0000222,5.11e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.14e-09!14;DOID:120!2.19e-08!27;DOID:193!3.98e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.80e-10;14!DOID:120;4.06e-08;27!DOID:193;1.08e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.08e-09,14;DOID:120,3.19e-08,27;DOID:193,8.34e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.68e-15!95;UBERON:0000475!2.05e-12!365;UBERON:0000914!2.51e-11!83;UBERON:0002329!2.51e-11!83;UBERON:0003077!2.51e-11!83;UBERON:0003059!2.51e-11!83;UBERON:0007282!2.51e-11!83;UBERON:0009618!2.51e-11!83;UBERON:0007285!2.51e-11!83;UBERON:0000486!6.36e-11!82;UBERON:0005256!1.29e-10!143;UBERON:0002100!5.31e-10!216;UBERON:0002097!1.27e-09!40;UBERON:0002199!2.52e-09!45;UBERON:0002416!2.52e-09!45;UBERON:0000468!4.21e-09!659;UBERON:0004290!5.65e-09!70;UBERON:0000481!6.21e-09!347;UBERON:0004923!1.04e-08!57;UBERON:0003104!4.18e-08!238;UBERON:0009142!4.18e-08!238;UBERON:0001134!6.79e-08!61;UBERON:0002036!6.79e-08!61;UBERON:0003082!6.79e-08!61;UBERON:0002385!1.23e-07!63;UBERON:0001015!1.23e-07!63;UBERON:0000383!1.23e-07!63;UBERON:0000467!1.95e-07!625;UBERON:0005156!2.12e-07!59;UBERON:0000990!2.12e-07!59;UBERON:0000480!3.03e-07!626;UBERON:0000490!3.28e-07!138;UBERON:0003134!7.57e-07!37;UBERON:0000474!7.57e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;6.07e-08;41!UBERON:0004923;1.08e-07;55!UBERON:0002199;3.95e-07;46!UBERON:0002416;3.95e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.60e-16,99;UBERON:0000486,8.13e-11,83;UBERON:0002097,1.58e-10,41;UBERON:0002199,4.88e-10,46;UBERON:0002416,4.88e-10,46;UBERON:0004923,8.18e-10,66;UBERON:0005256,4.51e-09,122;UBERON:0002329,1.01e-08,71;UBERON:0003059,1.01e-08,71;UBERON:0007282,1.01e-08,71;UBERON:0004290,1.01e-08,71;UBERON:0009618,1.01e-08,71;UBERON:0007524,1.11e-08,73;UBERON:0003077,2.39e-08,72;UBERON:0007285,2.39e-08,72;UBERON:0001134,1.26e-07,62;UBERON:0002036,1.26e-07,62;UBERON:0003082,1.26e-07,62;UBERON:0003104,1.50e-07,160;UBERON:0009142,1.50e-07,160;UBERON:0000490,2.19e-07,148;UBERON:0002100,3.76e-07,199;UBERON:0007503,4.33e-07,78;UBERON:0002385,6.55e-07,64;UBERON:0001015,6.55e-07,64;UBERON:0000383,6.55e-07,64 | |||
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| ||
|short_description=p@chr2:151326151..151326158,- | |||
}} | }} |
Latest revision as of 01:14, 29 July 2015
Short description: | p@chr2:151326151..151326158, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:151326151..151326158, - |
Coexpression cluster: | C2662_Fibroblast_mesenchymal_cervical_leiomyoma_Smooth_Mesothelial_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.29e-16 | 76 |
embryonic cell | 1.43e-14 | 250 |
skin fibroblast | 4.01e-09 | 23 |
electrically responsive cell | 1.38e-08 | 61 |
electrically active cell | 1.38e-08 | 61 |
muscle precursor cell | 1.56e-08 | 58 |
myoblast | 1.56e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.56e-08 | 58 |
muscle cell | 1.62e-07 | 55 |
smooth muscle cell | 2.81e-07 | 43 |
smooth muscle myoblast | 2.81e-07 | 43 |
mesothelial cell | 3.25e-07 | 19 |
mesodermal cell | 5.11e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.60e-16 | 99 |
multilaminar epithelium | 8.13e-11 | 83 |
skin of body | 1.58e-10 | 41 |
integument | 4.88e-10 | 46 |
integumental system | 4.88e-10 | 46 |
organ component layer | 8.18e-10 | 66 |
trunk mesenchyme | 4.51e-09 | 122 |
somite | 1.01e-08 | 71 |
presomitic mesoderm | 1.01e-08 | 71 |
presumptive segmental plate | 1.01e-08 | 71 |
dermomyotome | 1.01e-08 | 71 |
trunk paraxial mesoderm | 1.01e-08 | 71 |
dense mesenchyme tissue | 1.11e-08 | 73 |
paraxial mesoderm | 2.39e-08 | 72 |
presumptive paraxial mesoderm | 2.39e-08 | 72 |
skeletal muscle tissue | 1.26e-07 | 62 |
striated muscle tissue | 1.26e-07 | 62 |
myotome | 1.26e-07 | 62 |
mesenchyme | 1.50e-07 | 160 |
entire embryonic mesenchyme | 1.50e-07 | 160 |
unilaminar epithelium | 2.19e-07 | 148 |
trunk | 3.76e-07 | 199 |
epithelial vesicle | 4.33e-07 | 78 |
muscle tissue | 6.55e-07 | 64 |
musculature | 6.55e-07 | 64 |
musculature of body | 6.55e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.08e-09 | 14 |
female reproductive organ cancer | 3.19e-08 | 27 |
reproductive organ cancer | 8.34e-08 | 29 |