FFCP PHASE1:Hg19::chr2:28190214..28190227,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr2:28190214..28190227,+ to FFCP PHASE1:Hg19::chr2:28190214..28190227,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:28190214..28190227,+ | |||
|description=CAGE_peak_at_chr2:28190214..28190227,+ | |||
|id=chr2:28190214..28190227,+ | |||
|ontology_enrichment_celltype=CL:0002570!1.98e-10!8;CL:0000188!2.46e-09!9;CL:0000048!3.94e-08!430;CL:0000723!1.30e-07!436;CL:0002194!2.50e-07!63;CL:0000576!2.50e-07!63;CL:0000040!2.50e-07!63;CL:0000559!2.50e-07!63;CL:0000034!5.85e-07!444;CL:0002009!7.26e-07!65;CL:0000839!8.28e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000188;5.08e-22;9!CL:0002570;3.01e-19;8!CL:0000594;7.51e-11;3!CL:0000723;2.60e-09;61!CL:0002540;5.15e-09;6!CL:0000235;9.59e-09;6!CL:0000680;1.31e-07;7!CL:0000134;5.15e-07;55!CL:0000034;6.31e-07;69!CL:0000048;6.66e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.63e-22,9;CL:0002570,3.48e-19,8;CL:0000594,6.85e-11,3;CL:0002540,5.50e-09,6;CL:0000235,1.24e-08,6;CL:0000048,6.51e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.83e-14!167;UBERON:0004765!7.06e-10!101;UBERON:0001434!7.06e-10!101;UBERON:0002371!2.06e-08!80;UBERON:0001474!3.72e-08!86;UBERON:0002384!1.29e-07!375;UBERON:0001013!1.76e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;6.70e-18;16!UBERON:0002036;6.70e-18;16!UBERON:0001013;1.90e-13;14!UBERON:0002385;1.36e-09;31!UBERON:0001015;1.36e-09;31!UBERON:0000383;1.36e-09;31!UBERON:0002204;5.06e-08;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.53e-14,167;UBERON:0001013,2.36e-13,14;UBERON:0001434,8.58e-09,100;UBERON:0000926,6.24e-08,315;UBERON:0004120,6.24e-08,315;UBERON:0006603,6.24e-08,315;UBERON:0002371,3.53e-07,76 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.704772020479856,0,0.893922188854576,0,0,1.26343974685366,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11957737119962,0,0.77272670290256,0,0,0,0.232429036905685,1.6446715520873,1.85823822537062,0,1.0246428261164,0.236482229888585,1.37898272294647,0.645484683583826,0,0,1.63743690034707,0.898893937780338,0.306083892370903,0.962787081228281,0.639337125799041,0,0,0,0,1.70215567407342,0.622822248995575,0.251248665256743,0.521482918420201,1.3031330682307,0,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.454072282934794,0.576175924479999,0,0.936480230490962,0.570471821544449,0.597794722207204,0,0.323745888736263,0,0,0,0,0,0.494533858557114,0,0,0,0,0,2.63386572528503,0.612975591598039,1.50238058906597,0,0,0.427114777637135,0.847727604638247,0,0.103052529238439,0,0,0,0,0,0.644349290496095,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0.928735856063958,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,8.42415354501256,7.28292695214768,0.93733833986777,0.503946384596579,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.07333828582095,0.258543431515556,7.15312891703765,0.845302752556,0,0,0,1.41849132023278,0,0,0.542621605391443,0,1.30294473717494,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0.868687840005475,0,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08506009479894,0,0.356857977594324,0,0.35142424497814,2.10662269809403,2.27407504055985,0,0,0,0.260650843404249,0,2.05886054286514,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0.321707842287215,0,0.616838775210622,2.48586415438378,1.97105174433142,0,1.85936605535935,0,0,0,0,0.546273504020151,0.262248829918848,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.183138929636687,0.082509499920588,0.574265537996172,0,1.6068392984416,1.54673149267395,4.62145851343933,6.90766536267583,2.89456802217514,25.0289170543078,8.99103502268217,3.92042486114064,3.56128142586949,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0.949138274156178,0.38126038784765,0.255897791311334,0.42793898803392,0,0,1.61885211824983,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,14.8182701831956,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,0,0.241192877250816,0,0,0,0.87754158861589,0,0,1.61595542857974,0,0,0,0,0.957003479195758,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88950589901519,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0.164185041498678,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,4.47764408660622,6.77768598556951,2.77402930751307,6.25029917407794,38.489888968144,28.4739590910891,7.55172225709848,7.71277711192519,0.310874401165561,0.443565449968902,0.477890301491107,3.59842489730884,0.155262956876259,0,2.12673371646396,0,0,1.52322084867518,0,0.363697318405119,0,0.464033759878494,0,0,12.7056410917633,8.41873721914798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,3.4531480251986,0.215649622793364,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,1.29180516505481,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,28.2387096184928,0,0,0,0,0.135075169236789,0,0.413373593002368,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,2.21755925406597,0,0.857440047187092,0,0.0657727735628491,0,0,0.156986185701028,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,1.12929087541872,0,1.94284397223656,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0.203974470572744,0,0,1.85997509083376,0,0.865253124247578,0,0,0,0,0,0,0,0.606229585745915,0,0,0,0,0,0.258355639344024,1.48979314310059,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0.726713517082227,0.214100523890983,0.704772020479856,0,0.893922188854576,0,0,1.26343974685366,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11957737119962,0,0.77272670290256,0,0,0,0.232429036905685,1.6446715520873,1.85823822537062,0,1.0246428261164,0.236482229888585,1.37898272294647,0.645484683583826,0,0,1.63743690034707,0.898893937780338,0.306083892370903,0.962787081228281,0.639337125799041,0,0,0,0,1.70215567407342,0.622822248995575,0.251248665256743,0.521482918420201,1.3031330682307,0,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.454072282934794,0.576175924479999,0,0.936480230490962,0.570471821544449,0.597794722207204,0,0.323745888736263,0,0,0,0,0,0.494533858557114,0,0,0,0,0,2.63386572528503,0.612975591598039,1.50238058906597,0,0,0.427114777637135,0.847727604638247,0,0.103052529238439,0,0,0,0,0,0.644349290496095,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0.928735856063958,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,8.42415354501256,7.28292695214768,0.93733833986777,0.503946384596579,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.07333828582095,0.258543431515556,7.15312891703765,0.845302752556,0,0,0,1.41849132023278,0,0,0.542621605391443,0,1.30294473717494,0,0,0,0,0,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0.868687840005475,0,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08506009479894,0,0.356857977594324,0,0.35142424497814,2.10662269809403,2.27407504055985,0,0,0,0.260650843404249,0,2.05886054286514,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0.321707842287215,0,0.616838775210622,2.48586415438378,1.97105174433142,0,1.85936605535935,0,0,0,0,0.546273504020151,0.262248829918848,0,0,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.183138929636687,0.082509499920588,0.574265537996172,0,1.6068392984416,1.54673149267395,4.62145851343933,6.90766536267583,2.89456802217514,25.0289170543078,8.99103502268217,3.92042486114064,3.56128142586949,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0.949138274156178,0.38126038784765,0.255897791311334,0.42793898803392,0,0,1.61885211824983,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,14.8182701831956,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,0,0.241192877250816,0,0,0,0.87754158861589,0,0,1.61595542857974,0,0,0,0,0.957003479195758,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88950589901519,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.272406812223151,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0.164185041498678,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,4.47764408660622,6.77768598556951,2.77402930751307,6.25029917407794,38.489888968144,28.4739590910891,7.55172225709848,7.71277711192519,0.310874401165561,0.443565449968902,0.477890301491107,3.59842489730884,0.155262956876259,0,2.12673371646396,0,0,1.52322084867518,0,0.363697318405119,0,0.464033759878494,0,0,12.7056410917633,8.41873721914798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,3.4531480251986,0.215649622793364,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,1.29180516505481,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,28.2387096184928,0,0,0,0,0.135075169236789,0,0.413373593002368,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,2.21755925406597,0,0.857440047187092,0,0.0657727735628491,0,0,0.156986185701028,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,1.12929087541872,0,1.94284397223656,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0.203974470572744,0,0,1.85997509083376,0,0.865253124247578,0,0,0,0,0,0,0,0.606229585745915,0,0,0,0,0,0.258355639344024,1.48979314310059,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr2:28190214..28190227,+ | |||
}} | }} |
Latest revision as of 09:18, 29 July 2015
Short description: | p@chr2:28190214..28190227, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:28190214..28190227, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 3.63e-22 | 9 |
mesenchymal stem cell of adipose | 3.48e-19 | 8 |
skeletal muscle satellite cell | 6.85e-11 | 3 |
mesenchymal stem cell of the bone marrow | 5.50e-09 | 6 |
macrophage | 1.24e-08 | 6 |
multi fate stem cell | 6.51e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.53e-14 | 167 |
adipose tissue | 2.36e-13 | 14 |
skeletal system | 8.58e-09 | 100 |
mesoderm | 6.24e-08 | 315 |
mesoderm-derived structure | 6.24e-08 | 315 |
presumptive mesoderm | 6.24e-08 | 315 |
bone marrow | 3.53e-07 | 76 |