FFCP PHASE1:Hg19::chr2:44554050..44554063,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:44554050..44554063,- to FFCP PHASE1:Hg19::chr2:44554050..44554063,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:44554050..44554063,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr2:44554050..44554063,- | |||
|id=chr2:44554050..44554063,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;9.98e-30;1!CL:0000159;1.33e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,9.99e-30,1;CL:0000159,1.33e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.90e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;9.98e-30;1!DOID:4468;2.05e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.99e-30,1;DOID:4468,2.05e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.50e-24!57;UBERON:0005068!5.50e-24!57;UBERON:0006241!5.50e-24!57;UBERON:0007135!5.50e-24!57;UBERON:0007023!3.75e-21!115;UBERON:0002616!1.53e-19!59;UBERON:0001017!9.94e-19!82;UBERON:0000073!1.64e-18!94;UBERON:0001016!1.64e-18!94;UBERON:0005743!2.63e-18!86;UBERON:0002020!5.84e-18!34;UBERON:0003528!5.84e-18!34;UBERON:0000955!1.73e-17!69;UBERON:0006238!1.73e-17!69;UBERON:0001893!2.05e-17!34;UBERON:0001869!3.20e-17!32;UBERON:0002780!1.27e-16!41;UBERON:0001890!1.27e-16!41;UBERON:0006240!1.27e-16!41;UBERON:0002791!1.66e-16!33;UBERON:0003080!4.68e-16!42;UBERON:0000956!1.47e-15!25;UBERON:0000203!1.47e-15!25;UBERON:0003075!2.50e-15!86;UBERON:0007284!2.50e-15!86;UBERON:0002346!3.60e-15!90;UBERON:0002619!1.59e-14!22;UBERON:0001950!4.09e-14!20;UBERON:0004111!3.13e-11!241;UBERON:0000025!5.35e-11!194;UBERON:0003056!8.92e-11!61;UBERON:0000033!3.43e-10!123;UBERON:0000200!5.80e-10!6;UBERON:0000153!6.51e-10!129;UBERON:0007811!6.51e-10!129;UBERON:0000477!1.46e-09!286;UBERON:0003076!2.45e-09!15;UBERON:0003057!2.45e-09!15;UBERON:0004733!1.12e-07!12;UBERON:0002028!1.12e-07!12;UBERON:0007277!1.12e-07!12;UBERON:0000924!1.55e-07!173;UBERON:0006601!1.55e-07!173;UBERON:0001871!1.61e-07!7;UBERON:0004121!1.91e-07!169;UBERON:0004732!5.93e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;8.46e-57;2!UBERON:0000200;6.48e-43;6!UBERON:0001870;2.64e-38;3!UBERON:0004911;9.98e-30;1!UBERON:0002771;1.15e-15;2!UBERON:0004909;1.33e-15;2!UBERON:0001950;7.13e-13;20!UBERON:0002619;8.10e-12;22!UBERON:0000956;1.55e-10;25!UBERON:0000203;1.55e-10;25!UBERON:0002791;2.56e-08;32!UBERON:0001869;2.56e-08;32!UBERON:0001893;7.17e-08;34!UBERON:0003528;2.04e-07;34!UBERON:0002020;2.04e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,8.47e-57,2;UBERON:0000200,6.48e-43,6;UBERON:0001870,2.64e-38,3;UBERON:0004911,9.99e-30,1;UBERON:0002771,1.15e-15,2;UBERON:0004909,1.33e-15,2;UBERON:0001950,7.13e-13,20;UBERON:0002619,8.10e-12,22;UBERON:0000956,1.55e-10,25;UBERON:0000203,1.55e-10,25;UBERON:0000073,6.83e-09,53;UBERON:0002616,6.83e-09,53;UBERON:0001049,1.90e-08,56;UBERON:0005068,1.90e-08,56;UBERON:0006241,1.90e-08,56;UBERON:0007135,1.90e-08,56;UBERON:0002791,1.91e-08,32;UBERON:0001869,1.91e-08,32;UBERON:0003528,5.33e-08,34;UBERON:0002020,5.33e-08,34;UBERON:0001893,5.33e-08,34;UBERON:0000955,5.93e-07,68;UBERON:0006238,5.93e-07,68;UBERON:0002780,9.05e-07,41;UBERON:0001890,9.05e-07,41;UBERON:0003080,9.05e-07,41;UBERON:0006240,9.05e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.241192877250816,1.52581736317083,0.663475559587348,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,1.30586246527318,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0.19351266257817,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0.39961921916426,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0.0846733320657845,0,0.408610218334727,0,0.137539436597234,0,0,0.77380195455795,0.242998226632099,0,0.86686278029118,0.577000469484979,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0.387848869084652,0.39669780522807,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,1.77213635993397,5.85726071529423,1.1267183763585,0,0.332787154610557,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0,0,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.218419276384028,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0.41023272848151,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0.171488009437418,0.203909198930495,0.394636641377094,0.236387681767936,0,0,0.314231179832004,0,0.913158720509496,0.215927591218621,0,0.0714765441766563,0.316027223465453,0.116241425368125,0,0,0,0.17071847709395,0,0.430227358820278,0.118332000730565,0,0.423387050190929,0,0.31020638566432,0,2.9082412267426,0.098150233615243,0.121917924982269,0,0,1.1598144313382,0,0,0,0.118920090777569,0.11294608203896,0,0.150962843566674,0,0,0,0.245148321753905,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0.271965960763659,0,0,0,0,0.432626562123789,0.126166424835079,0.109265571963696,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.517164979309476,0,0.23806443146374,0,0,0,0.0636471582781649,0.404234377916439,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.241192877250816,1.52581736317083,0.663475559587348,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,1.30586246527318,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0.19351266257817,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0.39961921916426,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0.0846733320657845,0,0.408610218334727,0,0.137539436597234,0,0,0.77380195455795,0.242998226632099,0,0.86686278029118,0.577000469484979,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0.387848869084652,0.39669780522807,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,1.77213635993397,5.85726071529423,1.1267183763585,0,0.332787154610557,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0,0,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.218419276384028,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0.41023272848151,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0.171488009437418,0.203909198930495,0.394636641377094,0.236387681767936,0,0,0.314231179832004,0,0.913158720509496,0.215927591218621,0,0.0714765441766563,0.316027223465453,0.116241425368125,0,0,0,0.17071847709395,0,0.430227358820278,0.118332000730565,0,0.423387050190929,0,0.31020638566432,0,2.9082412267426,0.098150233615243,0.121917924982269,0,0,1.1598144313382,0,0,0,0.118920090777569,0.11294608203896,0,0.150962843566674,0,0,0,0.245148321753905,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0.271965960763659,0,0,0,0,0.432626562123789,0.126166424835079,0.109265571963696,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.517164979309476,0,0.23806443146374,0,0,0,0.0636471582781649,0.404234377916439,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr2:44554050..44554063,- | |||
}} | }} |
Latest revision as of 10:20, 29 July 2015
Short description: | p@chr2:44554050..44554063, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:44554050..44554063, - |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 9.99e-30 | 1 |
seromucus secreting cell | 1.33e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 8.47e-57 | 2 |
gyrus | 6.48e-43 | 6 |
frontal cortex | 2.64e-38 | 3 |
epithelium of female gonad | 9.99e-30 | 1 |
middle temporal gyrus | 1.15e-15 | 2 |
epithelium of gonad | 1.33e-15 | 2 |
neocortex | 7.13e-13 | 20 |
regional part of cerebral cortex | 8.10e-12 | 22 |
cerebral cortex | 1.55e-10 | 25 |
pallium | 1.55e-10 | 25 |
regional part of nervous system | 6.83e-09 | 53 |
regional part of brain | 6.83e-09 | 53 |
neural tube | 1.90e-08 | 56 |
neural rod | 1.90e-08 | 56 |
future spinal cord | 1.90e-08 | 56 |
neural keel | 1.90e-08 | 56 |
regional part of telencephalon | 1.91e-08 | 32 |
cerebral hemisphere | 1.91e-08 | 32 |
brain grey matter | 5.33e-08 | 34 |
gray matter | 5.33e-08 | 34 |
telencephalon | 5.33e-08 | 34 |
brain | 5.93e-07 | 68 |
future brain | 5.93e-07 | 68 |
regional part of forebrain | 9.05e-07 | 41 |
forebrain | 9.05e-07 | 41 |
anterior neural tube | 9.05e-07 | 41 |
future forebrain | 9.05e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.99e-30 | 1 |
clear cell adenocarcinoma | 2.05e-15 | 2 |