FFCP PHASE1:Hg19::chr2:7005785..7005864,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:7005785..7005864,- to FFCP PHASE1:Hg19::chr2:7005785..7005864,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=129607 | |EntrezGene=129607 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27015 | |HGNC=27015 | ||
|TSSclassifier=strong | |||
|UniProt=Q5EBM0 | |UniProt=Q5EBM0 | ||
|association_with_transcript=0bp_to_ENST00000256722,ENST00000404168_5end | |||
|cluster_id=chr2:7005785..7005864,- | |||
|coexpression_cluster_id=C413 | |||
|description=CAGE_peak_1_at_CMPK2_5end | |||
|id=chr2:7005785..7005864,- | |||
|ontology_enrichment_celltype=CL:0000763!3.16e-29!112;CL:0000049!3.16e-29!112;CL:0000037!8.77e-27!172;CL:0000566!8.77e-27!172;CL:0000766!3.51e-26!76;CL:0002032!1.05e-24!165;CL:0000837!1.05e-24!165;CL:0002057!9.79e-24!42;CL:0000988!1.06e-23!182;CL:0000839!1.10e-23!70;CL:0002194!1.19e-23!63;CL:0000576!1.19e-23!63;CL:0000040!1.19e-23!63;CL:0000559!1.19e-23!63;CL:0002009!4.85e-22!65;CL:0000557!3.19e-21!71;CL:0000860!5.96e-20!45;CL:0000738!2.62e-19!140;CL:0002087!3.00e-18!119;CL:0002031!1.47e-17!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.79e-21;33!CL:0002057;7.79e-21;33!CL:0000473;5.87e-20;39!CL:0000234;5.87e-20;39!CL:0000576;7.49e-20;48!CL:0000766;2.90e-16;69!CL:0000763;2.67e-14;100!CL:0002087;1.77e-07;104!CL:0000738;8.41e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,8.69e-38,108;CL:0000049,8.69e-38,108;CL:0000766,2.10e-35,72;CL:0000037,1.04e-33,168;CL:0002194,5.81e-33,59;CL:0000576,5.81e-33,59;CL:0000040,5.81e-33,59;CL:0000559,5.81e-33,59;CL:0000839,2.17e-32,66;CL:0002032,3.51e-31,161;CL:0000837,3.51e-31,161;CL:0002009,6.47e-31,61;CL:0000473,8.23e-31,48;CL:0000234,8.23e-31,48;CL:0000988,7.78e-30,177;CL:0000557,2.71e-29,67;CL:0000860,6.94e-28,42;CL:0002057,6.94e-28,42;CL:0000738,1.70e-25,136;CL:0002087,5.09e-24,115;CL:0002031,8.04e-23,120 | |||
|ontology_enrichment_development_v019=CL:0002057;4.13e-20;42!CL:0000049;1.43e-11;108 | |||
|ontology_enrichment_disease=DOID:8692!1.57e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.90e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.46e-08,31;DOID:1240,2.48e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.97e-23!102;UBERON:0003061!6.97e-23!102;UBERON:0002193!2.16e-22!112;UBERON:0002371!2.02e-17!80;UBERON:0007023!4.49e-17!115;UBERON:0002405!2.09e-15!115;UBERON:0001474!4.21e-14!86;UBERON:0004765!1.06e-11!101;UBERON:0001434!1.06e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.01e-30,98;UBERON:0003061,1.01e-30,98;UBERON:0002193,2.01e-28,108;UBERON:0002371,1.18e-24,76;UBERON:0002405,1.33e-24,93;UBERON:0001474,9.68e-21,82;UBERON:0007023,4.06e-18,114;UBERON:0004765,5.93e-17,90;UBERON:0001434,2.86e-15,100;UBERON:0003081,3.53e-10,203 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0.737201809504527,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0.61560529038394,1.63200552995402,0.626909442956176,0,0.136874425072884,0.125542639594803,2.44522898393444,1.39571002064908,1.8890587515283,7.86728553697808,2.30297638858328,4.95411594611443,0,0,0,4.8029664359787,0,4.11040615068786,4.9859586767869,7.42014455639524,14.5397283379621,11.4196891862361,3.56283032620878,9.01514486719653,5.37973483484389,5.29026321164333,5.57943340731977,5.81072592264212,8.22335776043652,5.88442104700697,189.013901755653,152.927941797873,118.71407940407,47.5749039416534,25.1739026597692,9.47985406160392,4.89430082810772,5.18521685109907,4.26974620445661,185.486838776767,61.2974441715339,119.556042524421,244.08996213817,159.969853412549,212.686150515814,145.975247030178,55.0363667950406,84.0810036144026,136.679273899668,117.333656644545,90.1333705526234,230.657210503314,71.4458613815875,124.369718264268,9.50648788403738,9.779797798392,11.1119082119439,9.54793364745208,8.86043667764887,6.75047464127737,9.9754460309437,10.1447505371536,9.86386430329023,0,1.09227722252426,0.889509253863555,1.70692089026603,0,1.14950487990897,1.98313461835459,0,1.70763890732835,0,0.764546456250458,6.60856642895129,24.101868208206,4.21414535640123,1.57367816091066,0.786021525498329,2.2616164889946,0.167186495390678,0.651844533267181,1.89379122293893,1.94826728407911,0.779873198196215,1.17842362989935,1.10766947291811,0.812411591295047,1.92136979588513,1.95089021339817,21.7058034076852,11.3303507292198,7.24507714337631,2.52087157375503,0.535081656179426,1.04535523804977,2.15287751125376,1.91610246800961,3.77990190030893,0.253019692019503,1.59282707162048,0.651083453856419,0.950452044448374,0.903450714466637,1.27986611154418,0,1.89421801635213,0.821127996921047,2.41928091869679,1.87208137048455,2.17236605824198,0,0,0.255725123687061,0.361439152384566,0,0.869079113764942,0.795285947051099,2.91980922181582,0.567208902984407,0.665188192387692,0.43917392846563,4.32230949142452,1.45718115317017,0.370784442784429,2.92092654289215,4.52737316978095,5.7171923023112,0.715471872916026,20.0198218773045,1.11437250398869,0,0.860234595106124,0.347140501607594,0,0,1.10047216776027,0.626984899610432,0.775250277507987,1.42306505074684,0.66944122552934,2.01414658554573,0,1.95249646038536,0,2.43042584364528,0.625098097988558,0.44905874525234,0.900891843866578,0,0,0.549605231791222,11.8602375692457,27.1446184903828,0,0,0.12663051166458,0,0.573673241497627,1.06400514659507,0.560677600142307,0,0,0,0.538842688278752,0.817309515567294,0,0,1.64025002283658,0,0.570471821544449,0,0.352303495931295,0,0.421352420106746,0.204154171254893,0.368502951935304,0.103325781175765,32.0760771466154,16.0723504031062,0.910161361938026,0,0,0.625592599359821,0.277064115484183,1.31693286264251,0,16.0754723030059,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0.194874010322397,0,0,0,0,0,0.67824236924195,0.193260853163297,0.818238361772504,0,0.243947412259191,0,0.348581828608555,0.207322110030741,0,0.36497735907583,17.2094485562798,3.21620469096443,1.38134921352481,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0,0,4.42893272774789,1.40241773803446,0.8231480226628,1.47008711385542,2.53510069643662,1.96565443335525,4.72631925345123,2.20731549707325,1.59884970106048,0.171567810298526,0.109750285408626,0,0.402115889646523,0.462942225792648,9.12263254868909,0,0,0.231860809950154,0,1.87676382089396,1.38895653772983,0.761016608938393,2.37061319387782,0,8.37137820697151,8.19014927987332,3.56714789492948,0.93733833986777,1.17587489739202,0.850650583454319,0,0.290633938513962,0,0,6.86777785303163,0.829312462163088,1.00883967391873,1.13618190083742,0.444485260045183,2.29193055334967,3.51652341630141,0,1.13110241973656,0.600686115687835,6.00235508524214,0.336393253036082,1.30788020649984,0.2933531432838,0,0,0.845302752556,0.531876233169741,1.04007436911366,0.514414748524284,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0.301439377059586,0,0.499864955910285,13.378615870531,10.5473989200747,4.21667878966063,0,0,0,0.434343920002738,0.61642896765115,0,7.3976195035728,1.57624608161542,2.58753089831421,4.36366323351144,0.76228387266739,0,0.773288812777695,0.837581326671744,0.637938751653163,6.74106321552464,11.966458368161,45.5857064779639,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0.368738337083406,0,0.783204629850962,1.37257369524342,3.3082884179662,8.84428223356329,6.61710858381355,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,1.69630663182921,0.887808626565635,2.62806899244189,11.4235974420397,4.88083589531829,0,0,0,0,0.182091168006717,0,1.35359883872224,0.385076685522074,0,1.46139224653261,0.422206515571503,5.68666920354483,1.87103075804167,1.0795795805107,1.54227252690289,0,0,2.80363900349542,0.831076008928724,0.671624264166535,16.0059709951532,23.529190592241,0.256450125116389,0,0,3.50339439602256,0.0915694648183434,0,0,0,0,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| ||
|short_description=p1@CMPK2 | |||
}} | }} |
Latest revision as of 04:42, 18 September 2015
Short description: | p1@CMPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CMPK2_5end |
Coexpression cluster: | C413_CD14_Smooth_gall_mesothelioma_meningioma_Fibroblast_Neutrophils |
Association with transcript: | 0bp_to_ENST00000256722, ENST00000404168_5end |
EntrezGene: | CMPK2 |
HGNC: | 27015 |
UniProt: | Q5EBM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 8.69e-38 | 108 |
common myeloid progenitor | 8.69e-38 | 108 |
myeloid leukocyte | 2.10e-35 | 72 |
hematopoietic stem cell | 1.04e-33 | 168 |
monopoietic cell | 5.81e-33 | 59 |
monocyte | 5.81e-33 | 59 |
monoblast | 5.81e-33 | 59 |
promonocyte | 5.81e-33 | 59 |
myeloid lineage restricted progenitor cell | 2.17e-32 | 66 |
hematopoietic oligopotent progenitor cell | 3.51e-31 | 161 |
hematopoietic multipotent progenitor cell | 3.51e-31 | 161 |
macrophage dendritic cell progenitor | 6.47e-31 | 61 |
defensive cell | 8.23e-31 | 48 |
phagocyte | 8.23e-31 | 48 |
hematopoietic cell | 7.78e-30 | 177 |
granulocyte monocyte progenitor cell | 2.71e-29 | 67 |
classical monocyte | 6.94e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.94e-28 | 42 |
leukocyte | 1.70e-25 | 136 |
nongranular leukocyte | 5.09e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 8.04e-23 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.01e-30 | 98 |
blood island | 1.01e-30 | 98 |
hemolymphoid system | 2.01e-28 | 108 |
bone marrow | 1.18e-24 | 76 |
immune system | 1.33e-24 | 93 |
bone element | 9.68e-21 | 82 |
adult organism | 4.06e-18 | 114 |
skeletal element | 5.93e-17 | 90 |
skeletal system | 2.86e-15 | 100 |
lateral plate mesoderm | 3.53e-10 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.46e-08 | 31 |
leukemia | 2.48e-07 | 39 |