FFCP PHASE1:Hg19::chr3:45984947..45984966,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:45984947..45984966,+ to FFCP PHASE1:Hg19::chr3:45984947..45984966,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10663 | |EntrezGene=10663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16647 | |HGNC=16647 | ||
|TSSclassifier=strong | |||
|UniProt=O00574 | |UniProt=O00574 | ||
|association_with_transcript=0bp_to_ENST00000304552_5end | |||
|cluster_id=chr3:45984947..45984966,+ | |||
|coexpression_cluster_id=C300 | |||
|description=CAGE_peak_1_at_CXCR6_5end | |||
|id=chr3:45984947..45984966,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.40e-19!18;CL:0000789!1.40e-19!18;CL:0002420!1.40e-19!18;CL:0002419!1.40e-19!18;CL:0000790!1.40e-19!18;CL:0000738!2.54e-18!140;CL:0000084!2.76e-17!25;CL:0000827!2.76e-17!25;CL:0000625!2.23e-15!11;CL:0002087!6.39e-15!119;CL:0002031!2.00e-13!124;CL:0000037!1.49e-11!172;CL:0000566!1.49e-11!172;CL:0002032!2.87e-10!165;CL:0000837!2.87e-10!165;CL:0000988!5.28e-10!182;CL:0002057!7.48e-10!42;CL:0000860!9.33e-09!45;CL:0000766!4.39e-08!76;CL:0000838!2.07e-07!52;CL:0000624!2.16e-07!6;CL:0002009!2.78e-07!65;CL:0000557!3.70e-07!71;CL:0000542!3.75e-07!53;CL:0000051!3.75e-07!53;CL:0002194!5.34e-07!63;CL:0000576!5.34e-07!63;CL:0000040!5.34e-07!63;CL:0000559!5.34e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000625;3.83e-25;11!CL:0000791;1.11e-23;18!CL:0000789;1.11e-23;18!CL:0002419;1.11e-23;18!CL:0000084;3.08e-18;25!CL:0002619;2.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.84e-25,11;CL:0000791,9.06e-24,18;CL:0000789,9.06e-24,18;CL:0002420,9.06e-24,18;CL:0002419,9.06e-24,18;CL:0000790,9.06e-24,18;CL:0000084,3.35e-18,25;CL:0000827,3.35e-18,25;CL:0000738,7.25e-09,136;CL:0000838,8.10e-09,52;CL:0000542,1.43e-08,53;CL:0000051,1.43e-08,53;CL:0002087,1.46e-08,115;CL:0002619,2.20e-07,3;CL:0002031,3.71e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.11e-23;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.06e-37!115;UBERON:0002390!2.82e-13!102;UBERON:0003061!2.82e-13!102;UBERON:0002193!1.33e-12!112;UBERON:0000178!2.12e-09!15;UBERON:0000179!2.12e-09!15;UBERON:0000463!2.12e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.55e-14;15!UBERON:0000179;6.55e-14;15!UBERON:0000463;6.55e-14;15!UBERON:0002390;3.83e-10;32!UBERON:0002193;1.98e-07;42!UBERON:0004177;2.13e-07;5!UBERON:0005057;2.13e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.97e-19,114;UBERON:0000178,6.89e-14,15;UBERON:0000179,6.89e-14,15;UBERON:0000463,6.89e-14,15;UBERON:0002193,1.29e-08,108;UBERON:0002390,2.57e-08,98;UBERON:0003061,2.57e-08,98;UBERON:0004177,2.90e-08,7;UBERON:0005057,2.90e-08,7;UBERON:0003408,1.98e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,0,0,2.23915474239924,2.91504299417082,2.57575567634187,0.145398238779565,0.377875943688809,0,0.232429036905685,1.6446715520873,0.309706370895104,0,0.512321413058201,0.47296445977717,0.689491361473237,2.5819387343353,0,0.188242339542605,1.09162460023138,0.224723484445085,0.306083892370903,1.60464513538047,0.639337125799041,0,0.997318288108159,0,0.580418477257168,0.56738522469114,0.622822248995575,0.251248665256743,1.5644487552606,0.217188844705117,1.21079900526674,1.47311054395026,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,2.2616164889946,12.8733601450822,0.32592226663359,0,0,115.087001962384,17.9709603559651,21.045719985444,17.602251144726,57.6410938765538,67.6308607311367,125.466121212605,106.394756847552,52.4543585180445,0,0,0,72.0647419556521,22.6100091225134,17.5249997196141,7.84361045260459,18.1582286164735,21.4857539772618,15.207232711174,14.0034860742329,15.2304067273758,37.4792179657038,22.2570616921376,29.5606078891577,5.64498881029251,1.87208137048455,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,1.07813787429759,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082884179662,0.215714200818617,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,3.55213326462519,3.0585488285695,4.5571774973933,4.76463550915578,10.6954191002411,9.72709966789076,7.56044012133361,8.72437693923697,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,3.31540698637377,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,1.23120413606075,0,0,0,0.108647371922008,0.638002319463839,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,4.68825091867698,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0,0,0.789168805698781,1.20990716048664,0,1.64285107034069,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,1.06687918137261,0,0.225980740780532,0,0,0.189932387867636,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0,0,0.399358000997982,0.429226048136571,0,0.335917362433631,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,1.1248694577575,0,0.0607495566580247,0,1.02447419488958,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0.879313402068495,0,0.129282956361551,0.52893040697076,0,0,4.91222097811396,0.157204305099666,3.72815149812476,3.96932817449561,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36402216187572,3.72021552877417,0.163565394255844,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,1.95546853708069,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,1.64477330057155,2.48105589194647,0,0,0,0,0.606965604236632,0,0.266107110487916,0,0,0.203909198930495,0,0,0,1.17739639275771,0,0,0.913158720509496,0,0,1.57248397188644,0,0,0,0,0,0,0,2.15113679410139,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0.198950775161368,0,0,0,0,4.47610117026079,1.09279780251979,0,0.245148321753905,0,0.588925401344836,0,0,0,9.77432746990477,5.99458358154268,0,0,0,0,0,1.83491713361816,0.143339583151451,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,1.66713136080127,0,0,0,2.98527574661373,0,1.93766729508018,1.55186785739645,0,1.90941474834495,0.202117188958219,2.8303177226605,0.342233301085281,7.5434299376338,2.94061042109973,0.332660356546013,0,0,0,0,0,1.34465588601153,0,0.665756774185513,6.23948760132181,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,0,0,2.23915474239924,2.91504299417082,2.57575567634187,0.145398238779565,0.377875943688809,0,0.232429036905685,1.6446715520873,0.309706370895104,0,0.512321413058201,0.47296445977717,0.689491361473237,2.5819387343353,0,0.188242339542605,1.09162460023138,0.224723484445085,0.306083892370903,1.60464513538047,0.639337125799041,0,0.997318288108159,0,0.580418477257168,0.56738522469114,0.622822248995575,0.251248665256743,1.5644487552606,0.217188844705117,1.21079900526674,1.47311054395026,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,2.2616164889946,12.8733601450822,0.32592226663359,0,0,115.087001962384,17.9709603559651,21.045719985444,17.602251144726,57.6410938765538,67.6308607311367,125.466121212605,106.394756847552,52.4543585180445,0,0,0,72.0647419556521,22.6100091225134,17.5249997196141,7.84361045260459,18.1582286164735,21.4857539772618,15.207232711174,14.0034860742329,15.2304067273758,37.4792179657038,22.2570616921376,29.5606078891577,5.64498881029251,1.87208137048455,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,1.07813787429759,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082884179662,0.215714200818617,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,3.55213326462519,3.0585488285695,4.5571774973933,4.76463550915578,10.6954191002411,9.72709966789076,7.56044012133361,8.72437693923697,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,3.31540698637377,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,1.23120413606075,0,0,0,0.108647371922008,0.638002319463839,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,4.68825091867698,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0,0,0.789168805698781,1.20990716048664,0,1.64285107034069,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,1.06687918137261,0,0.225980740780532,0,0,0.189932387867636,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0,0,0.399358000997982,0.429226048136571,0,0.335917362433631,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,1.1248694577575,0,0.0607495566580247,0,1.02447419488958,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0.879313402068495,0,0.129282956361551,0.52893040697076,0,0,4.91222097811396,0.157204305099666,3.72815149812476,3.96932817449561,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36402216187572,3.72021552877417,0.163565394255844,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,1.95546853708069,0,0.781514011233092,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,1.64477330057155,2.48105589194647,0,0,0,0,0.606965604236632,0,0.266107110487916,0,0,0.203909198930495,0,0,0,1.17739639275771,0,0,0.913158720509496,0,0,1.57248397188644,0,0,0,0,0,0,0,2.15113679410139,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0.198950775161368,0,0,0,0,4.47610117026079,1.09279780251979,0,0.245148321753905,0,0.588925401344836,0,0,0,9.77432746990477,5.99458358154268,0,0,0,0,0,1.83491713361816,0.143339583151451,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,1.66713136080127,0,0,0,2.98527574661373,0,1.93766729508018,1.55186785739645,0,1.90941474834495,0.202117188958219,2.8303177226605,0.342233301085281,7.5434299376338,2.94061042109973,0.332660356546013,0,0,0,0,0,1.34465588601153,0,0.665756774185513,6.23948760132181,0 | ||
|short_description=p1@CXCR6 | |||
}} | }} |
Latest revision as of 09:38, 18 September 2015
Short description: | p1@CXCR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CXCR6_5end |
Coexpression cluster: | C300_CD4_CD8_NK_Natural_blood_mycosis_Basophils |
Association with transcript: | 0bp_to_ENST00000304552_5end |
EntrezGene: | CXCR6 |
HGNC: | 16647 |
UniProt: | O00574 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.84e-25 | 11 |
mature alpha-beta T cell | 9.06e-24 | 18 |
alpha-beta T cell | 9.06e-24 | 18 |
immature T cell | 9.06e-24 | 18 |
mature T cell | 9.06e-24 | 18 |
immature alpha-beta T cell | 9.06e-24 | 18 |
T cell | 3.35e-18 | 25 |
pro-T cell | 3.35e-18 | 25 |
leukocyte | 7.25e-09 | 136 |
lymphoid lineage restricted progenitor cell | 8.10e-09 | 52 |
lymphocyte | 1.43e-08 | 53 |
common lymphoid progenitor | 1.43e-08 | 53 |
nongranular leukocyte | 1.46e-08 | 115 |
adult endothelial progenitor cell | 2.20e-07 | 3 |
hematopoietic lineage restricted progenitor cell | 3.71e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.97e-19 | 114 |
blood | 6.89e-14 | 15 |
haemolymphatic fluid | 6.89e-14 | 15 |
organism substance | 6.89e-14 | 15 |
hemolymphoid system | 1.29e-08 | 108 |
hematopoietic system | 2.57e-08 | 98 |
blood island | 2.57e-08 | 98 |
hemopoietic organ | 2.90e-08 | 7 |
immune organ | 2.90e-08 | 7 |
gland of gut | 1.98e-07 | 10 |