FFCP PHASE1:Hg19::chr4:114899807..114899826,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:114899807..114899826,- to FFCP PHASE1:Hg19::chr4:114899807..114899826,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79642 | |EntrezGene=79642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26286 | |HGNC=26286 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_BC033156_5end | |||
|cluster_id=chr4:114899807..114899826,- | |||
|description=CAGE_peak_7_at_ARSJ_5end | |||
|id=chr4:114899807..114899826,- | |||
|ontology_enrichment_celltype=CL:0000055!1.28e-17!180;CL:0000057!1.65e-10!75;CL:0000680!7.43e-10!57;CL:0000056!7.43e-10!57;CL:0000355!7.43e-10!57;CL:0000187!1.97e-08!54;CL:0002620!2.29e-08!23;CL:0000222!2.69e-08!119;CL:0000183!3.68e-08!59;CL:0000192!2.49e-07!42;CL:0000514!2.49e-07!42;CL:0000220!3.12e-07!246;CL:0002321!5.55e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.27e-12;32!CL:0002539;4.58e-10;10!CL:0000192;8.60e-09;43!CL:0002595;1.27e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.02e-13,32;CL:0000192,4.34e-11,43;CL:0000514,4.34e-11,43;CL:0000680,1.78e-10,58;CL:0000056,1.78e-10,58;CL:0000355,1.78e-10,58;CL:0002539,2.58e-10,10;CL:0000187,1.33e-09,55;CL:0000393,2.19e-08,61;CL:0000211,2.19e-08,61;CL:0002595,1.33e-07,5;CL:0000222,1.80e-07,121;CL:0000197,9.04e-07,6;CL:0000098,9.04e-07,6;CL:0002167,9.04e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;8.60e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.60e-11!83;UBERON:0002329!6.60e-11!83;UBERON:0003077!6.60e-11!83;UBERON:0003059!6.60e-11!83;UBERON:0007282!6.60e-11!83;UBERON:0009618!6.60e-11!83;UBERON:0007285!6.60e-11!83;UBERON:0005256!9.97e-09!143;UBERON:0004290!1.25e-08!70;UBERON:0000490!1.38e-08!138;UBERON:0001134!1.90e-08!61;UBERON:0002036!1.90e-08!61;UBERON:0003082!1.90e-08!61;UBERON:0003102!2.66e-08!95;UBERON:0002385!2.82e-08!63;UBERON:0001015!2.82e-08!63;UBERON:0000383!2.82e-08!63;UBERON:0001637!9.80e-08!42;UBERON:0003509!9.80e-08!42;UBERON:0004572!9.80e-08!42;UBERON:0002049!1.43e-07!79;UBERON:0007798!1.43e-07!79;UBERON:0000475!1.98e-07!365;UBERON:0001981!2.45e-07!60;UBERON:0007500!2.45e-07!60;UBERON:0004537!2.45e-07!60;UBERON:0006965!2.45e-07!60;UBERON:0000481!3.60e-07!347;UBERON:0000055!3.76e-07!69;UBERON:0000486!3.95e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.81e-16;33!UBERON:0004571;1.81e-16;33!UBERON:0001637;9.49e-12;42!UBERON:0003509;9.49e-12;42!UBERON:0004572;9.49e-12;42!UBERON:0004237;4.58e-10;10!UBERON:0004695;4.58e-10;10!UBERON:0002111;4.58e-10;10!UBERON:0004178;4.58e-10;10!UBERON:0003513;3.64e-09;7!UBERON:0000947;1.22e-08;21!UBERON:0010191;1.22e-08;21!UBERON:0003834;1.27e-07;5!UBERON:0001533;1.27e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.76e-18,33;UBERON:0004571,3.76e-18,33;UBERON:0001637,6.41e-16,42;UBERON:0003509,6.41e-16,42;UBERON:0004572,6.41e-16,42;UBERON:0007500,4.26e-12,59;UBERON:0001981,4.26e-12,59;UBERON:0004537,4.26e-12,59;UBERON:0006965,4.26e-12,59;UBERON:0004237,2.58e-10,10;UBERON:0004695,2.58e-10,10;UBERON:0002111,2.58e-10,10;UBERON:0004178,2.58e-10,10;UBERON:0000055,4.78e-10,68;UBERON:0002049,1.19e-09,78;UBERON:0007798,1.19e-09,78;UBERON:0001134,1.33e-09,62;UBERON:0002036,1.33e-09,62;UBERON:0003082,1.33e-09,62;UBERON:0002385,3.29e-09,64;UBERON:0001015,3.29e-09,64;UBERON:0000383,3.29e-09,64;UBERON:0003513,3.37e-09,7;UBERON:0007524,6.33e-09,73;UBERON:0000947,7.83e-09,21;UBERON:0010191,7.83e-09,21;UBERON:0004872,8.67e-09,83;UBERON:0007503,3.46e-08,78;UBERON:0002329,5.25e-08,71;UBERON:0003059,5.25e-08,71;UBERON:0007282,5.25e-08,71;UBERON:0004290,5.25e-08,71;UBERON:0009618,5.25e-08,71;UBERON:0003077,7.45e-08,72;UBERON:0007285,7.45e-08,72;UBERON:0003834,1.33e-07,5;UBERON:0001533,1.33e-07,5;UBERON:0000486,1.84e-07,83;UBERON:0004535,8.34e-07,109;UBERON:0001135,9.34e-07,15 | |||
|phase1_expression=0,0.642301571672949,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0.436882744260345,0,0.37129905888014,0.662794751455832,5.3786011716142,1.20538905604795,2.92124036154949,1.95173119516203,0,0.204000691244253,0,0.286235987131057,0.821246550437305,0.87879847716362,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,1.30361867064741,0.795285947051099,1.45990461090791,0.472674085820339,1.55210578223795,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,1.37559020970034,0,0,0,0.33472061276467,0,0.760272105718513,0,0,2.43042584364528,0.267899184852239,0,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0,0,0.379891534993739,0.397227542439656,1.43418310374407,0,0.560677600142307,0,0.74000264525148,0,0.67355336034844,1.14423332179421,0,0,0,0,0,0.448346041655403,0.587172493218824,0.971237666208789,0.842704840213491,0,0.61417158655884,0.206651562351531,0,1.23633464639278,0,0,0.168336113954066,0.625592599359821,0,0.438977620880838,3.0648779579902,0.751190294532984,0.680593098960126,0.89694817844431,0.427114777637135,0.635795703478686,0.600182192168805,0.515262646192195,0.515281080091258,0.18611685633159,0.337552664482532,0.292311015483596,0.757301322732344,0.184099797284599,0.161646056818812,1.06502877754984,0.705264687593482,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.277765335475589,0,1.03993478527958,1.44331342025273,0,0.469634776943287,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0.099972991182057,0,0,0,1.19812427745791,6.89171615004683,0,0.868687840005475,1.2328579353023,0.358121926479791,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.813795071099207,1.66376689224646,5.70972764150918,1.26161932027148,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0.521301686808497,0,0.343143423810856,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0.321707842287215,0,0.462629081407967,0.355123450626254,0,1.55776328755086,0.464841513839837,0,1.00253235151642,0.0920809889358963,0.68888668898764,2.36718518408732,0.786746489756545,0,0.308061348417659,0,0,0.316654886678627,0,0.510281115829547,1.29549549661284,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0.308097234229289,0.921022048356777,1.24052915236078,0.107420244868274,0.290033387828457,0.255679882248303,0.178064071293475,0.495854746082934,0.576570202095319,0.127612712494584,0.10115778085555,1.85938219718914,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0,0.953150969619124,0,1.28381696410176,0,1.56989728039846,0.359744915166629,0.823611089208164,0.235624804691373,0,1.58510321173008,1.68503382495592,0,1.21856744815642,0,0,0.565621727814851,0,0,1.32687795048244,1.31535265576129,0.578775534266688,0.655894752046633,0.202910376962704,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,0,1.05553817648832,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,1.48482340416319,0.614321404198464,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0.409074730008619,0,1.24415835064723,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0.341380344856499,0.254253650292766,0,0,0,0.347249989866585,0,0,0,2.10100593869327,1.47773809476774,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,1.20990716048664,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0.0821154570532092,0.0969890164884194,0,0,0.137041924646751,0,0.126621591911757,0,0,0,0,0,0,2.57392496792947,0,0,0,0,0.209205692624666,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.211200673038813,0,0,0,0,0,0.542999601753713,1.72844298240254,2.93928624098468,0,0,0.340776043570843,0.226624183040251,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.732157589411779,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0.941063278792687,0,0,0,0.701139929541673,0.554805861502613,0,0.50313580350515,0,0,0.453692771289717,0.15543720058278,0.73927574994817,0.796483835818512,0.899606224327209,0.155262956876259,0.414706207840855,0.265841714557995,0.521745061811734,0.300515217994437,0,0.4068707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| ||
|short_description=p7@ARSJ | |||
}} | }} |
Latest revision as of 19:43, 24 September 2015
Short description: | p7@ARSJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ARSJ_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_BC033156_5end |
EntrezGene: | ARSJ |
HGNC: | 26286 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.02e-13 | 32 |
smooth muscle cell | 4.34e-11 | 43 |
smooth muscle myoblast | 4.34e-11 | 43 |
muscle precursor cell | 1.78e-10 | 58 |
myoblast | 1.78e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.78e-10 | 58 |
aortic smooth muscle cell | 2.58e-10 | 10 |
muscle cell | 1.33e-09 | 55 |
electrically responsive cell | 2.19e-08 | 61 |
electrically active cell | 2.19e-08 | 61 |
smooth muscle cell of the subclavian artery | 1.33e-07 | 5 |
mesodermal cell | 1.80e-07 | 121 |
receptor cell | 9.04e-07 | 6 |
sensory epithelial cell | 9.04e-07 | 6 |
olfactory epithelial cell | 9.04e-07 | 6 |