FFCP PHASE1:Hg19::chr4:28378184..28378186,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:28378184..28378186,- | |||
|description=CAGE_peak_at_chr4:28378184..28378186,- | |||
|id=chr4:28378184..28378186,- | |||
|ontology_enrichment_celltype=CL:0000680!6.36e-13!57;CL:0000056!6.36e-13!57;CL:0000355!6.36e-13!57;CL:0000055!6.33e-11!180;CL:0000187!4.74e-10!54;CL:0002368!2.45e-09!13;CL:0000188!3.81e-09!9;CL:0002371!9.73e-09!591;CL:0000183!1.06e-08!59;CL:0002334!1.76e-08!12;CL:0000393!1.85e-08!60;CL:0000211!1.85e-08!60;CL:0000144!8.55e-08!625;CL:0000220!1.12e-07!246;CL:0002321!1.64e-07!248;CL:0000548!3.13e-07!679;CL:0000004!3.13e-07!679;CL:0000255!3.13e-07!679;CL:0000012!4.48e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000680;3.92e-13;7!CL:0000515;6.70e-12;3!CL:0002580;2.27e-11;3!CL:0002621;5.27e-11;3!CL:0002334;4.90e-10;12!CL:0000188;7.07e-10;9!CL:0000056;5.05e-09;4!CL:0002570;8.40e-08;8!CL:0002617;1.40e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,2.05e-11,3;CL:0002621,6.51e-11,3;CL:0000680,2.05e-10,58;CL:0000056,2.05e-10,58;CL:0000355,2.05e-10,58;CL:0002334,5.52e-10,12;CL:0000188,8.64e-10,9;CL:0000515,6.98e-09,4;CL:0002321,1.63e-08,250;CL:0002617,8.06e-08,2;CL:0002570,8.79e-08,8;CL:0000187,8.20e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000515;5.05e-09;4!CL:0000355;8.95e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!3.91e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.38e-12!83;UBERON:0002329!8.38e-12!83;UBERON:0003077!8.38e-12!83;UBERON:0003059!8.38e-12!83;UBERON:0007282!8.38e-12!83;UBERON:0009618!8.38e-12!83;UBERON:0007285!8.38e-12!83;UBERON:0001134!1.32e-11!61;UBERON:0002036!1.32e-11!61;UBERON:0003082!1.32e-11!61;UBERON:0000486!4.00e-11!82;UBERON:0002385!5.15e-11!63;UBERON:0001015!5.15e-11!63;UBERON:0000383!5.15e-11!63;UBERON:0004290!5.81e-11!70;UBERON:0002100!1.09e-08!216;UBERON:0000475!1.24e-07!365;UBERON:0005256!4.22e-07!143;UBERON:0000490!5.13e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;4.46e-14;31!UBERON:0001015;4.46e-14;31!UBERON:0000383;4.46e-14;31!UBERON:0001134;2.17e-13;16!UBERON:0002036;2.17e-13;16!UBERON:0001949;5.27e-11;3!UBERON:0000310;1.79e-08;10!UBERON:0001443;1.13e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.51e-11,3;UBERON:0001134,1.60e-09,62;UBERON:0002036,1.60e-09,62;UBERON:0003082,1.60e-09,62;UBERON:0000486,1.63e-09,83;UBERON:0002385,4.05e-09,64;UBERON:0001015,4.05e-09,64;UBERON:0000383,4.05e-09,64;UBERON:0000310,1.31e-08,10;UBERON:0002329,6.84e-08,71;UBERON:0003059,6.84e-08,71;UBERON:0007282,6.84e-08,71;UBERON:0004290,6.84e-08,71;UBERON:0009618,6.84e-08,71;UBERON:0001443,8.51e-08,11;UBERON:0003077,9.77e-08,72;UBERON:0007285,9.77e-08,72;UBERON:0007524,1.38e-07,73;UBERON:0007503,6.82e-07,78 | |||
|phase1_expression=1.63510541343501,1.92690471501885,0.563817616383885,0,0,0,0,1.26343974685366,0,1.22866968250754,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0.505008341862199,0,0.554128230968366,0,0,0,0,0,0,0.211931901159562,0,0,0.772921620136887,0.18611685633159,0.675105328965065,0.194874010322397,0,0.0920498986422993,0,0,0,0,4.44499962275583,1.09098448236334,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,1.1240175325762,4.72486170334665,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,3.52762469217605,2.41017665312057,10.7470227243418,2.90633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,3.381211010224,0,0,0,0,0,0,0,0.823240336780769,10.0978217131058,0,0,0,0,0,0,0,0,0,0,0,24.1784782134857,1.02738161275192,16.6526695813103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,7.93944985020086,1.2276957863045,2.80660094433074,2.69092213436972,0.511707249066704,2.2519548960105,0,0,1.06537035187876,0.0821271560138091,0,0,0,0.40101294060657,1.47329582297434,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,1.07834031980251,2.6095624703442,8.68370406652543,2.25582514223375,0.435050081742686,4.09087811597284,0,1.65284915360978,2.49847087574638,1.91419068741876,0.2023155617111,0.464845549297286,1.25924938732256,7.6674099717666,0,2.66153015158511,3.47973196830029,0,0.143124886741991,0,0,0,0,0,0,0,0.719489830333259,0.823611089208164,0.589062011728432,2.42618977887979,0,0,0,0.731140468893853,0,0,0,0,0,0.66343897524122,1.75380354101505,0,0,0,0,0,0.717056761020258,0,0,7.80474340955315,0,0,0,0,1.15466535270614,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.409074730008619,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.40831224751241,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07466329815372,7.47882591511118,0,0,0,0,1.83072054717539,0,0.310874401165561,0.443565449968902,3.18593534327405,0.449803112163605,0.776314784381297,0,3.19010057469594,0.521745061811734,0.150257608997218,1.14241563650639,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,2.23807212351111,1.24415452006595,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,8.00902400481051,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85577265189338,0,0,0,0,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |phase1_expression=1.63510541343501,1.92690471501885,0.563817616383885,0,0,0,0,1.26343974685366,0,1.22866968250754,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0.505008341862199,0,0.554128230968366,0,0,0,0,0,0,0.211931901159562,0,0,0.772921620136887,0.18611685633159,0.675105328965065,0.194874010322397,0,0.0920498986422993,0,0,0,0,4.44499962275583,1.09098448236334,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,1.1240175325762,4.72486170334665,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,3.52762469217605,2.41017665312057,10.7470227243418,2.90633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,3.381211010224,0,0,0,0,0,0,0,0.823240336780769,10.0978217131058,0,0,0,0,0,0,0,0,0,0,0,24.1784782134857,1.02738161275192,16.6526695813103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,7.93944985020086,1.2276957863045,2.80660094433074,2.69092213436972,0.511707249066704,2.2519548960105,0,0,1.06537035187876,0.0821271560138091,0,0,0,0.40101294060657,1.47329582297434,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,1.07834031980251,2.6095624703442,8.68370406652543,2.25582514223375,0.435050081742686,4.09087811597284,0,1.65284915360978,2.49847087574638,1.91419068741876,0.2023155617111,0.464845549297286,1.25924938732256,7.6674099717666,0,2.66153015158511,3.47973196830029,0,0.143124886741991,0,0,0,0,0,0,0,0.719489830333259,0.823611089208164,0.589062011728432,2.42618977887979,0,0,0,0.731140468893853,0,0,0,0,0,0.66343897524122,1.75380354101505,0,0,0,0,0,0.717056761020258,0,0,7.80474340955315,0,0,0,0,1.15466535270614,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.409074730008619,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.40831224751241,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07466329815372,7.47882591511118,0,0,0,0,1.83072054717539,0,0.310874401165561,0.443565449968902,3.18593534327405,0.449803112163605,0.776314784381297,0,3.19010057469594,0.521745061811734,0.150257608997218,1.14241563650639,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,2.23807212351111,1.24415452006595,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,8.00902400481051,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85577265189338,0,0,0,0,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:28378184..28378186,- | |||
}} | }} |
Latest revision as of 04:42, 30 July 2015
Short description: | p@chr4:28378184..28378186, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:28378184..28378186, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 2.05e-11 | 3 |
gingival epithelial cell | 6.51e-11 | 3 |
muscle precursor cell | 2.05e-10 | 58 |
myoblast | 2.05e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.05e-10 | 58 |
preadipocyte | 5.52e-10 | 12 |
cell of skeletal muscle | 8.64e-10 | 9 |
skeletal muscle myoblast | 6.98e-09 | 4 |
embryonic cell | 1.63e-08 | 250 |
adipocyte of breast | 8.06e-08 | 2 |
mesenchymal stem cell of adipose | 8.79e-08 | 8 |
muscle cell | 8.20e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.51e-11 | 3 |
skeletal muscle tissue | 1.60e-09 | 62 |
striated muscle tissue | 1.60e-09 | 62 |
myotome | 1.60e-09 | 62 |
multilaminar epithelium | 1.63e-09 | 83 |
muscle tissue | 4.05e-09 | 64 |
musculature | 4.05e-09 | 64 |
musculature of body | 4.05e-09 | 64 |
breast | 1.31e-08 | 10 |
somite | 6.84e-08 | 71 |
presomitic mesoderm | 6.84e-08 | 71 |
presumptive segmental plate | 6.84e-08 | 71 |
dermomyotome | 6.84e-08 | 71 |
trunk paraxial mesoderm | 6.84e-08 | 71 |
chest | 8.51e-08 | 11 |
paraxial mesoderm | 9.77e-08 | 72 |
presumptive paraxial mesoderm | 9.77e-08 | 72 |
dense mesenchyme tissue | 1.38e-07 | 73 |
epithelial vesicle | 6.82e-07 | 78 |