FFCP PHASE1:Hg19::chr6:30525100..30525120,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:30525100..30525120,+ to FFCP PHASE1:Hg19::chr6:30525100..30525120,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80742 | |EntrezGene=80742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21149 | |HGNC=21149 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000491173_5end | |||
|cluster_id=chr6:30525100..30525120,+ | |||
|coexpression_cluster_id=C4588 | |||
|description=CAGE_peak_2_at_PRR3_5end | |||
|id=chr6:30525100..30525120,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,9.94e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.75e-34!235;DOID:14566!2.40e-33!239;DOID:0050687!2.78e-18!143;DOID:0050686!4.14e-14!137;DOID:305!3.64e-12!106;DOID:2531!1.75e-11!51;DOID:0060083!1.75e-11!51;DOID:1240!3.30e-10!39;DOID:8692!2.57e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.03e-08;39!DOID:2531;5.23e-08;51!DOID:0060083;5.23e-08;51!DOID:8692;3.46e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.51e-34,235;DOID:14566,3.41e-33,239;DOID:0050687,4.29e-18,143;DOID:0050686,4.81e-14,137;DOID:305,4.45e-12,106;DOID:2531,1.68e-11,51;DOID:0060083,1.68e-11,51;DOID:1240,3.18e-10,39;DOID:8692,2.51e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.30e-12!94;UBERON:0001016!1.30e-12!94;UBERON:0005743!1.42e-10!86;UBERON:0001017!1.44e-10!82;UBERON:0002346!2.99e-08!90;UBERON:0000955!3.44e-08!69;UBERON:0006238!3.44e-08!69;UBERON:0000924!1.19e-07!173;UBERON:0006601!1.19e-07!173;UBERON:0003075!7.31e-07!86;UBERON:0007284!7.31e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.33e-13,89;UBERON:0001017,2.90e-11,81;UBERON:0011216,1.05e-09,223;UBERON:0000955,7.81e-09,68;UBERON:0006238,7.81e-09,68;UBERON:0002346,2.39e-08,86;UBERON:0004121,1.51e-07,171;UBERON:0000924,1.51e-07,171;UBERON:0006601,1.51e-07,171;UBERON:0003075,6.26e-07,82;UBERON:0007284,6.26e-07,82 | |||
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| ||
|short_description=p2@PRR3 | |||
}} | }} |
Latest revision as of 16:56, 17 September 2015
Short description: | p2@PRR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRR3_5end |
Coexpression cluster: | C4588_neuroblastoma_neuroectodermal_osteosarcoma_medulloblastoma_acute_mesothelioma_small |
Association with transcript: | -3bp_to_ENST00000491173_5end |
EntrezGene: | PRR3 |
HGNC: | 21149 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 9.94e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.33e-13 | 89 |
central nervous system | 2.90e-11 | 81 |
organ system subdivision | 1.05e-09 | 223 |
brain | 7.81e-09 | 68 |
future brain | 7.81e-09 | 68 |
neurectoderm | 2.39e-08 | 86 |
ectoderm-derived structure | 1.51e-07 | 171 |
ectoderm | 1.51e-07 | 171 |
presumptive ectoderm | 1.51e-07 | 171 |
neural plate | 6.26e-07 | 82 |
presumptive neural plate | 6.26e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.51e-34 | 235 |
disease of cellular proliferation | 3.41e-33 | 239 |
cell type cancer | 4.29e-18 | 143 |
organ system cancer | 4.81e-14 | 137 |
carcinoma | 4.45e-12 | 106 |
hematologic cancer | 1.68e-11 | 51 |
immune system cancer | 1.68e-11 | 51 |
leukemia | 3.18e-10 | 39 |
myeloid leukemia | 2.51e-07 | 31 |