FFCP PHASE1:Hg19::chr7:128550736..128550768,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:128550736..128550768,- to FFCP PHASE1:Hg19::chr7:128550736..128550768,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=375616 | |EntrezGene=375616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=17585 | |HGNC=17585 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZWJ8 | |UniProt=Q6ZWJ8 | ||
|association_with_transcript=4bp_to_ENST00000257704,ENST00000297801,ENST00000441244,ENST00000476647,ENST00000487494,NM_001135914,NM_199349,uc011kor.1,uc011kos.1_5end | |||
|cluster_id=chr7:128550736..128550768,- | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_1_at_KCP_5end | |||
|id=chr7:128550736..128550768,- | |||
|ontology_enrichment_celltype=CL:1000507!6.28e-12!12;CL:1000494!6.28e-12!12;CL:1000449!7.50e-10!16;CL:1000497!2.05e-08!18;CL:0002518!2.05e-08!18;CL:0002322!1.99e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:1000507;4.41e-31;10!CL:1000494;4.41e-31;10!CL:1000449;5.00e-20;15!CL:1000497;1.99e-17;17!CL:0002518;1.99e-17;17!CL:0000669;1.72e-13;4!CL:0002681;3.26e-12;12!CL:0002584;3.26e-12;12!CL:0002322;2.39e-10;5!CL:0000239;6.91e-10;3!CL:1000615;6.91e-10;3!CL:0002306;6.91e-10;3!CL:0000650;1.01e-07;2!CL:1000500;1.01e-07;2!CL:1000618;1.01e-07;2!CL:1001318;1.01e-07;2!CL:0002173;1.01e-07;2!CL:0000039;1.43e-07;7!CL:0000586;1.43e-07;7!CL:0002575;1.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.14e-31,10;CL:1000494,2.14e-31,10;CL:1000449,3.13e-20,15;CL:1000497,1.32e-17,17;CL:0002518,1.32e-17,17;CL:0000669,1.82e-13,4;CL:0002681,2.47e-12,12;CL:0002584,2.47e-12,12;CL:0000239,3.21e-10,3;CL:1000615,3.21e-10,3;CL:0002306,3.21e-10,3;CL:0002322,3.36e-10,5;CL:0000650,1.08e-07,2;CL:1000500,1.08e-07,2;CL:1000618,1.08e-07,2;CL:1001318,1.08e-07,2;CL:0002173,1.08e-07,2;CL:0000039,1.43e-07,7;CL:0000586,1.43e-07,7;CL:0002575,1.90e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.94e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-15!115;UBERON:0003103!8.52e-13!69;UBERON:0000489!1.21e-12!32;UBERON:0004876!2.35e-12!20;UBERON:0000080!2.68e-12!18;UBERON:0002120!2.68e-12!18;UBERON:0004875!2.68e-12!18;UBERON:0005721!2.68e-12!18;UBERON:0005754!2.68e-12!18;UBERON:0007297!2.68e-12!18;UBERON:0009773!6.28e-12!12;UBERON:0001231!6.28e-12!12;UBERON:0004810!6.28e-12!12;UBERON:0003887!1.10e-11!21;UBERON:0002113!1.84e-11!27;UBERON:0003918!1.84e-11!27;UBERON:0005095!1.84e-11!27;UBERON:0007687!1.84e-11!27;UBERON:0006555!5.39e-11!17;UBERON:0005103!5.39e-11!17;UBERON:0000083!5.39e-11!17;UBERON:0009201!5.39e-11!17;UBERON:0004819!5.39e-11!17;UBERON:0006553!5.39e-11!17;UBERON:0003074!5.39e-11!17;UBERON:0003060!5.39e-11!17;UBERON:0003135!4.90e-10!11;UBERON:0004211!7.50e-10!16;UBERON:0001285!7.50e-10!16;UBERON:0007684!7.50e-10!16;UBERON:0003220!7.50e-10!16;UBERON:0004208!7.50e-10!16;UBERON:0003075!2.54e-09!86;UBERON:0007284!2.54e-09!86;UBERON:0000058!8.46e-09!26;UBERON:0002346!1.64e-08!90;UBERON:0003886!7.69e-08!63;UBERON:0005743!1.54e-07!86;UBERON:0000073!2.62e-07!94;UBERON:0001016!2.62e-07!94;UBERON:0000064!3.19e-07!219;UBERON:0000966!3.93e-07!5;UBERON:0005388!3.93e-07!5;UBERON:0001802!3.93e-07!5;UBERON:0006554!5.54e-07!44;UBERON:0003056!5.60e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.41e-31;10!UBERON:0009773;4.41e-31;10!UBERON:0001231;4.41e-31;10!UBERON:0004810;4.41e-31;10!UBERON:0002113;9.17e-21;24!UBERON:0011143;9.17e-21;24!UBERON:0006555;5.00e-20;15!UBERON:0004819;5.00e-20;15!UBERON:0001285;5.00e-20;15!UBERON:0007684;5.00e-20;15!UBERON:0000489;1.19e-16;29!UBERON:0006554;5.42e-16;30!UBERON:0001008;5.42e-16;30!UBERON:0000922;1.14e-15;49!UBERON:0003135;2.91e-14;11!UBERON:0001225;3.26e-12;12!UBERON:0008987;3.26e-12;12!UBERON:0006947;1.45e-11;3!UBERON:0004054;1.45e-11;3!UBERON:0000473;2.98e-10;8!UBERON:0006853;6.91e-10;3!UBERON:0007685;6.91e-10;3!UBERON:0004134;6.91e-10;3!UBERON:0001851;1.43e-09;15!UBERON:0000353;1.43e-09;15!UBERON:0005904;9.17e-09;4!UBERON:0003101;1.43e-08;22!UBERON:0000079;1.43e-08;22!UBERON:0005172;3.02e-08;52!UBERON:0005173;3.02e-08;52!UBERON:0003567;1.01e-07;2!UBERON:0003838;1.01e-07;2!UBERON:0003586;1.01e-07;2!UBERON:0005169;1.01e-07;2!UBERON:0002321;1.01e-07;2!UBERON:0005215;1.01e-07;2!UBERON:0002303;1.01e-07;2!UBERON:0002319;1.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.14e-31,10;UBERON:0002113,7.19e-26,26;UBERON:0003918,7.19e-26,26;UBERON:0011143,7.19e-26,26;UBERON:0005095,7.19e-26,26;UBERON:0007687,7.19e-26,26;UBERON:0006555,7.81e-23,16;UBERON:0004819,7.81e-23,16;UBERON:0000489,4.39e-21,31;UBERON:0004211,3.13e-20,15;UBERON:0009773,3.13e-20,15;UBERON:0001231,3.13e-20,15;UBERON:0001285,3.13e-20,15;UBERON:0007684,3.13e-20,15;UBERON:0004208,3.13e-20,15;UBERON:0005172,1.60e-15,54;UBERON:0005173,1.60e-15,54;UBERON:0006554,1.54e-14,47;UBERON:0003103,1.98e-14,68;UBERON:0003135,3.41e-14,11;UBERON:0001008,3.73e-14,48;UBERON:0002417,1.59e-13,60;UBERON:0000916,1.59e-13,60;UBERON:0001225,2.47e-12,12;UBERON:0008987,2.47e-12,12;UBERON:0006947,1.88e-11,3;UBERON:0004054,1.88e-11,3;UBERON:0005177,2.13e-10,101;UBERON:0000473,2.99e-10,8;UBERON:0006853,3.21e-10,3;UBERON:0007685,3.21e-10,3;UBERON:0004134,3.21e-10,3;UBERON:0001851,1.15e-09,15;UBERON:0000353,1.15e-09,15;UBERON:0009569,7.25e-09,112;UBERON:0005904,1.11e-08,4;UBERON:0003101,1.65e-08,22;UBERON:0000079,1.65e-08,22;UBERON:0003567,1.08e-07,2;UBERON:0003838,1.08e-07,2;UBERON:0003586,1.08e-07,2;UBERON:0005169,1.08e-07,2;UBERON:0002321,1.08e-07,2;UBERON:0005215,1.08e-07,2;UBERON:0002303,1.08e-07,2;UBERON:0002319,1.08e-07,2 | |||
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| ||
|short_description=p1@KCP | |||
}} | }} |
Latest revision as of 04:50, 16 September 2015
Short description: | p1@KCP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCP_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | 4bp_to_ENST00000257704, ENST00000297801, ENST00000441244, ENST00000476647, ENST00000487494, NM_001135914, NM_199349, uc011kor.1, uc011kos.1_5end |
EntrezGene: | KCP |
HGNC: | 17585 |
UniProt: | Q6ZWJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.14e-31 | 10 |
nephron tubule epithelial cell | 2.14e-31 | 10 |
epithelial cell of nephron | 3.13e-20 | 15 |
kidney cell | 1.32e-17 | 17 |
kidney epithelial cell | 1.32e-17 | 17 |
pericyte cell | 1.82e-13 | 4 |
kidney cortical cell | 2.47e-12 | 12 |
renal cortical epithelial cell | 2.47e-12 | 12 |
brush border epithelial cell | 3.21e-10 | 3 |
kidney cortex tubule cell | 3.21e-10 | 3 |
epithelial cell of proximal tubule | 3.21e-10 | 3 |
embryonic stem cell | 3.36e-10 | 5 |
mesangial cell | 1.08e-07 | 2 |
kidney interstitial cell | 1.08e-07 | 2 |
juxtaglomerular complex cell | 1.08e-07 | 2 |
renal interstitial pericyte | 1.08e-07 | 2 |
extraglomerular mesangial cell | 1.08e-07 | 2 |
germ line cell | 1.43e-07 | 7 |
germ cell | 1.43e-07 | 7 |
central nervous system pericyte | 1.90e-07 | 2 |