FFCP PHASE1:Hg19::chr7:134464414..134464425,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:134464414..134464425,+ to FFCP PHASE1:Hg19::chr7:134464414..134464425,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000361901_5end | |||
|cluster_id=chr7:134464414..134464425,+ | |||
|coexpression_cluster_id=C1986 | |||
|description=CAGE_peak_6_at_CALD1_5end | |||
|id=chr7:134464414..134464425,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.47e-32!180;CL:0000057!2.83e-15!75;CL:0000222!8.38e-12!119;CL:0000680!2.01e-11!57;CL:0000056!2.01e-11!57;CL:0000355!2.01e-11!57;CL:0000393!2.30e-11!60;CL:0000211!2.30e-11!60;CL:0000187!4.18e-11!54;CL:0000220!8.50e-11!246;CL:0002321!9.89e-11!248;CL:0000192!4.58e-10!42;CL:0000514!4.58e-10!42;CL:0000183!1.01e-09!59;CL:0000359!2.90e-09!32;CL:0002620!1.99e-07!23;CL:0002334!9.62e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.59e-09;32!CL:0002620;8.48e-08;23!CL:0000192;2.02e-07;43!CL:0002334;4.75e-07;12!CL:0000057;9.37e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.57e-17,76;CL:0000680,1.22e-11,58;CL:0000056,1.22e-11,58;CL:0000355,1.22e-11,58;CL:0000393,1.36e-11,61;CL:0000211,1.36e-11,61;CL:0000222,1.77e-11,121;CL:0000187,2.65e-11,55;CL:0002321,3.35e-10,250;CL:0000192,3.55e-10,43;CL:0000514,3.55e-10,43;CL:0000359,2.28e-09,32;CL:0002620,9.91e-08,23;CL:0002334,5.20e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.02e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!8.38e-14!84;UBERON:0000914!1.53e-13!83;UBERON:0002329!1.53e-13!83;UBERON:0003077!1.53e-13!83;UBERON:0003059!1.53e-13!83;UBERON:0007282!1.53e-13!83;UBERON:0009618!1.53e-13!83;UBERON:0007285!1.53e-13!83;UBERON:0002049!2.02e-13!79;UBERON:0007798!2.02e-13!79;UBERON:0000468!2.75e-13!659;UBERON:0002385!3.18e-12!63;UBERON:0001015!3.18e-12!63;UBERON:0000383!3.18e-12!63;UBERON:0000475!1.43e-11!365;UBERON:0001134!1.91e-11!61;UBERON:0002036!1.91e-11!61;UBERON:0003082!1.91e-11!61;UBERON:0004290!2.22e-11!70;UBERON:0000486!2.71e-11!82;UBERON:0005256!2.97e-11!143;UBERON:0001981!4.13e-11!60;UBERON:0007500!4.13e-11!60;UBERON:0004537!4.13e-11!60;UBERON:0006965!4.13e-11!60;UBERON:0000055!6.85e-11!69;UBERON:0000467!5.34e-10!625;UBERON:0000480!8.98e-10!626;UBERON:0001637!9.35e-10!42;UBERON:0003509!9.35e-10!42;UBERON:0004572!9.35e-10!42;UBERON:0003102!1.22e-09!95;UBERON:0004535!1.41e-09!110;UBERON:0001009!4.94e-09!113;UBERON:0000481!1.44e-08!347;UBERON:0000490!2.02e-08!138;UBERON:0004573!3.63e-08!33;UBERON:0004571!3.63e-08!33;UBERON:0002100!4.36e-08!216;UBERON:0003914!4.51e-08!118;UBERON:0000477!6.44e-08!286;UBERON:0002199!7.09e-08!45;UBERON:0002416!7.09e-08!45;UBERON:0000119!1.71e-07!312;UBERON:0002097!2.52e-07!40;UBERON:0000483!2.75e-07!309;UBERON:0003104!9.08e-07!238;UBERON:0009142!9.08e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.98e-07;42!UBERON:0003509;1.98e-07;42!UBERON:0004572;1.98e-07;42!UBERON:0002385;2.61e-07;31!UBERON:0001015;2.61e-07;31!UBERON:0000383;2.61e-07;31!UBERON:0004573;2.81e-07;33!UBERON:0004571;2.81e-07;33!UBERON:0001135;8.34e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.72e-13,83;UBERON:0002049,8.03e-13,78;UBERON:0007798,8.03e-13,78;UBERON:0002385,1.73e-12,64;UBERON:0001015,1.73e-12,64;UBERON:0000383,1.73e-12,64;UBERON:0007524,7.98e-12,73;UBERON:0001134,1.11e-11,62;UBERON:0002036,1.11e-11,62;UBERON:0003082,1.11e-11,62;UBERON:0002329,1.22e-11,71;UBERON:0003059,1.22e-11,71;UBERON:0007282,1.22e-11,71;UBERON:0004290,1.22e-11,71;UBERON:0009618,1.22e-11,71;UBERON:0003077,1.72e-11,72;UBERON:0007285,1.72e-11,72;UBERON:0000486,3.06e-11,83;UBERON:0007500,1.24e-10,59;UBERON:0001981,1.24e-10,59;UBERON:0004537,1.24e-10,59;UBERON:0006965,1.24e-10,59;UBERON:0000055,1.55e-10,68;UBERON:0003102,1.59e-10,99;UBERON:0007503,2.18e-10,78;UBERON:0005256,4.85e-10,122;UBERON:0001637,1.31e-09,42;UBERON:0003509,1.31e-09,42;UBERON:0004572,1.31e-09,42;UBERON:0004535,2.17e-09,109;UBERON:0003104,7.70e-09,160;UBERON:0009142,7.70e-09,160;UBERON:0001009,9.01e-09,112;UBERON:0000490,1.42e-08,148;UBERON:0002199,2.59e-08,46;UBERON:0002416,2.59e-08,46;UBERON:0004573,6.17e-08,33;UBERON:0004571,6.17e-08,33;UBERON:0002097,6.83e-08,41;UBERON:0003914,8.15e-08,117;UBERON:0001135,8.77e-07,15 | |||
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| ||
|short_description=p6@CALD1 | |||
}} | }} |
Latest revision as of 11:40, 16 September 2015
Short description: | p6@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CALD1_5end |
Coexpression cluster: | C1986_Preadipocyte_Mesenchymal_basal_Fibroblast_Ewing_hepatic_Adipocyte |
Association with transcript: | -3bp_to_ENST00000361901_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.57e-17 | 76 |
muscle precursor cell | 1.22e-11 | 58 |
myoblast | 1.22e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.22e-11 | 58 |
electrically responsive cell | 1.36e-11 | 61 |
electrically active cell | 1.36e-11 | 61 |
mesodermal cell | 1.77e-11 | 121 |
muscle cell | 2.65e-11 | 55 |
embryonic cell | 3.35e-10 | 250 |
smooth muscle cell | 3.55e-10 | 43 |
smooth muscle myoblast | 3.55e-10 | 43 |
vascular associated smooth muscle cell | 2.28e-09 | 32 |
skin fibroblast | 9.91e-08 | 23 |
preadipocyte | 5.20e-07 | 12 |