FFCP PHASE1:Hg19::chr7:75401513..75401535,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:75401513..75401535,- to FFCP PHASE1:Hg19::chr7:75401513..75401535,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10344 | |EntrezGene=10344 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10625 | |HGNC=10625 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y258 | |UniProt=Q9Y258 | ||
|association_with_transcript=39bp_to_ENST00000005180_5end | |||
|cluster_id=chr7:75401513..75401535,- | |||
|description=CAGE_peak_1_at_CCL26_5end | |||
|id=chr7:75401513..75401535,- | |||
|ontology_enrichment_celltype=CL:0000055!4.99e-21!180;CL:0000359!8.04e-16!32;CL:0000192!6.66e-15!42;CL:0000514!6.66e-15!42;CL:0000680!1.59e-14!57;CL:0000056!1.59e-14!57;CL:0000355!1.59e-14!57;CL:0000187!2.12e-13!54;CL:0000183!7.29e-12!59;CL:0000393!7.43e-12!60;CL:0000211!7.43e-12!60;CL:0000057!3.68e-10!75;CL:0000222!1.03e-08!119;CL:0002334!3.98e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.43e-22;32!CL:0000192;2.36e-14;43!CL:0002334;6.27e-10;12!CL:0002595;3.31e-08;5!CL:0002539;5.96e-08;10!CL:0000187;2.45e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.20e-24,32;CL:0000192,3.45e-20,43;CL:0000514,3.45e-20,43;CL:0000680,3.10e-16,58;CL:0000056,3.10e-16,58;CL:0000355,3.10e-16,58;CL:0000187,3.60e-15,55;CL:0000393,8.40e-13,61;CL:0000211,8.40e-13,61;CL:0000222,5.04e-11,121;CL:0002334,1.50e-09,12;CL:0002595,2.45e-08,5;CL:0002539,3.12e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.36e-14;43!CL:0000355;5.07e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!2.58e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.12e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.85e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.72e-12!61;UBERON:0002036!1.72e-12!61;UBERON:0003082!1.72e-12!61;UBERON:0001637!1.35e-11!42;UBERON:0003509!1.35e-11!42;UBERON:0004572!1.35e-11!42;UBERON:0002385!1.37e-11!63;UBERON:0001015!1.37e-11!63;UBERON:0000383!1.37e-11!63;UBERON:0004573!1.19e-10!33;UBERON:0004571!1.19e-10!33;UBERON:0004290!3.62e-10!70;UBERON:0000475!1.21e-09!365;UBERON:0004872!1.53e-09!84;UBERON:0001981!6.70e-09!60;UBERON:0007500!6.70e-09!60;UBERON:0004537!6.70e-09!60;UBERON:0006965!6.70e-09!60;UBERON:0002049!1.34e-08!79;UBERON:0007798!1.34e-08!79;UBERON:0000914!3.34e-08!83;UBERON:0002329!3.34e-08!83;UBERON:0003077!3.34e-08!83;UBERON:0003059!3.34e-08!83;UBERON:0007282!3.34e-08!83;UBERON:0009618!3.34e-08!83;UBERON:0007285!3.34e-08!83;UBERON:0000055!6.68e-08!69;UBERON:0001009!1.04e-07!113;UBERON:0000486!1.16e-07!82;UBERON:0004111!1.20e-07!241;UBERON:0007100!2.58e-07!27;UBERON:0003914!3.02e-07!118;UBERON:0002100!3.62e-07!216;UBERON:0004535!3.91e-07!110;UBERON:0000477!5.74e-07!286;UBERON:0005256!8.32e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.88e-11;33!UBERON:0004571;5.88e-11;33!UBERON:0001637;1.06e-09;42!UBERON:0003509;1.06e-09;42!UBERON:0004572;1.06e-09;42!UBERON:0003688;8.23e-09;6!UBERON:0002358;8.23e-09;6!UBERON:0003684;8.23e-09;6!UBERON:0001178;8.23e-09;6!UBERON:0003834;3.31e-08;5!UBERON:0001533;3.31e-08;5!UBERON:0004237;5.96e-08;10!UBERON:0004695;5.96e-08;10!UBERON:0002111;5.96e-08;10!UBERON:0004178;5.96e-08;10!UBERON:0003513;1.36e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.28e-15,42;UBERON:0003509,5.28e-15,42;UBERON:0004572,5.28e-15,42;UBERON:0001134,1.44e-14,62;UBERON:0002036,1.44e-14,62;UBERON:0003082,1.44e-14,62;UBERON:0002385,8.14e-14,64;UBERON:0001015,8.14e-14,64;UBERON:0000383,8.14e-14,64;UBERON:0004573,4.98e-13,33;UBERON:0004571,4.98e-13,33;UBERON:0002329,2.15e-12,71;UBERON:0003059,2.15e-12,71;UBERON:0007282,2.15e-12,71;UBERON:0004290,2.15e-12,71;UBERON:0009618,2.15e-12,71;UBERON:0007503,3.88e-12,78;UBERON:0003077,4.32e-12,72;UBERON:0007285,4.32e-12,72;UBERON:0007524,8.47e-12,73;UBERON:0004872,2.53e-11,83;UBERON:0007500,2.81e-11,59;UBERON:0001981,2.81e-11,59;UBERON:0004537,2.81e-11,59;UBERON:0006965,2.81e-11,59;UBERON:0005256,4.65e-10,122;UBERON:0002049,8.76e-10,78;UBERON:0007798,8.76e-10,78;UBERON:0000055,1.15e-09,68;UBERON:0000486,2.69e-09,83;UBERON:0003914,3.90e-09,117;UBERON:0003688,2.08e-08,6;UBERON:0002358,2.08e-08,6;UBERON:0003684,2.08e-08,6;UBERON:0001178,2.08e-08,6;UBERON:0003834,2.45e-08,5;UBERON:0001533,2.45e-08,5;UBERON:0004535,3.01e-08,109;UBERON:0004237,3.12e-08,10;UBERON:0004695,3.12e-08,10;UBERON:0002111,3.12e-08,10;UBERON:0004178,3.12e-08,10;UBERON:0002100,7.09e-08,199;UBERON:0001009,8.97e-08,112;UBERON:0003513,9.61e-08,7;UBERON:0003104,1.40e-07,160;UBERON:0009142,1.40e-07,160;UBERON:0000926,2.37e-07,315;UBERON:0004120,2.37e-07,315;UBERON:0006603,2.37e-07,315 | |||
|phase1_expression=1.81678379270557,0.428201047781966,6.06103937612676,1.0007329835313,3.12872766099101,5.23403114460221,0,0,0,1.72013755551056,1.39560233594486,0,0,0,0,1.34465029290355,2.41077811209591,0,3.41552959153355,0.738726348460727,1.42800483870977,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,0.511450247374121,0.361439152384566,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.614843499851882,0.130979075497713,0,0,21.0955805875544,16.0199358315326,11.0355107230658,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.25326102332916,1.58891016975863,0.286836620748814,0.354668382198357,0,3.20246987189115,1.2333377420858,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,1.1409436430889,0.298897361103602,0,0,0,0.408308342509787,0,0.103325781175765,0,0.247266929278557,0.910161361938026,2.87447256726495,0,0.125118519871964,0,2.19488810440419,0.612975591598039,0,0.226864366320042,0.717558542755448,0.427114777637135,0.847727604638247,5.40163972951924,0.206105058476878,0.515281080091258,0.558350568994769,9.11392194102838,0.389748020644795,1.26216887122057,0,0.80823028409406,1.06502877754984,0.705264687593482,0.67824236924195,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,1.40241773803446,1.2347220339942,0,0,0,0,0,0,5.31860211925429,0,0,0,0,0,1.03993478527958,0,0,1.05667824812239,0.433099343283221,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,1.93907573636667,0,0,2.12750493267896,3.12022310734098,0,0,0,1.28680194292333,0,0,0.325736184293735,0.355391948742546,0,3.01439377059586,6.97226766880235,4.79870357673874,0,0,0,2.15662369942424,0,0,1.30303176000821,0.205476322550383,1.96967059563885,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0,0,0,0,0,0,1.32845119707087,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,3.2254015016441,0.767309866440312,2.52594084989766,8.32904470162056,1.02341449813341,5.62988724002626,4.45254199334973,0.771048469013278,1.24293207719189,1.23190734020714,1.03850885836724,1.27831416305955,0,0.200506470303285,0,1.14814448164607,0.364182336013434,1.96686622439136,0,0.0770153371044148,0,0,0,0,0,0,0,1.35473218771926,0,0,0,0,0,0,0.512900250232778,0,0,2.47298427954533,0.183138929636687,0.577566499444116,0,0,8.03419649220798,0.096670718292122,0,0.15350367472613,0.275673144969061,0,0,0.340906509664404,0.178064071293475,0,0,0,0,0,1.88887408098384,1.3940745403212,8.62494024493049,10.6461206063404,1.73986598415015,1.48259375283136,2.57624796135584,0,1.58189712359363,1.5250415513906,0,0,0.636406495851874,3.92474320099615,0.359744915166629,0.823611089208164,1.29593642580255,10.7156715233857,1.58510321173008,8.00391066854064,0,15.1102363571396,4.22600587027022,0.136499911407986,1.27264888758341,2.26016233240486,7.71911480964574,7.29782872765342,1.75380354101505,0,0,2.84074527747786,1.239293992399,1.40847801266121,0.286822704408103,0.0982490410131212,1.78335525740625,2.48332744849418,0.211107635297664,0,0.75894634753143,0,0,0,0,2.7301702225266,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.445234820091624,0,0,0.996239941255349,0,0,0.102268682502155,0,0.622079175323615,0.269605053441981,0,0,0.295930216910801,0,1.11136990144637,0.969332746095218,0.371072392647405,0,0,0,0.724999575434793,1.2517279311405,0,0,0,0,0,0,0,0,0,0,2.19385397153973,0,0,0.461701551022782,0.341826167541004,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.471807930864739,0,0.234264445725339,0,1.17398771359254,0,0.394584402849391,0,0.30607276163049,6.69777744061972,0,0.103688191397247,0,0,0,1.19472429772959,0,3.46686682532847,0,0.195984794828755,0,1.39781334593624,41.6206198581312,0.387025325156341,0.584714536689484,0.574808199372465,0.193978032976839,0.176512253383001,34.1230918578604,0.137041924646751,0.19871461170299,0,0.195551382734803,0.64127056201227,0,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,2.3459590056354,0,0,0.136905378891993,0,0.859530882839914,0,1.11712960508902,0,2.15361907373044,0.199679000498991,0.858452096273142,0.446342914883745,0.201550417460179,1.44119953416961,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.121499113316049,1.67717343799633,0.394028536495991,0.104909176269996,0,0,0,0,0,0.76280561296425,2.71499800876856,8.64221491201268,2.28611152076586,0,0.082092520749339,0.340776043570843,2.15292973888239,0,1.32506888912221,0,0.13223260174269,0.171086837884329,0,0.427149650270779,0.157204305099666,0.414239055347196,2.48083010905975,0,0,3.191706288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| ||
|short_description=p1@CCL26 | |||
}} | }} |
Latest revision as of 12:28, 19 September 2015
Short description: | p1@CCL26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCL26_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000005180_5end |
EntrezGene: | CCL26 |
HGNC: | 10625 |
UniProt: | Q9Y258 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.20e-24 | 32 |
smooth muscle cell | 3.45e-20 | 43 |
smooth muscle myoblast | 3.45e-20 | 43 |
muscle precursor cell | 3.10e-16 | 58 |
myoblast | 3.10e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.10e-16 | 58 |
muscle cell | 3.60e-15 | 55 |
electrically responsive cell | 8.40e-13 | 61 |
electrically active cell | 8.40e-13 | 61 |
mesodermal cell | 5.04e-11 | 121 |
preadipocyte | 1.50e-09 | 12 |
smooth muscle cell of the subclavian artery | 2.45e-08 | 5 |
aortic smooth muscle cell | 3.12e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.85e-11 | 14 |