FFCP PHASE1:Hg19::chr8:145582231..145582288,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:145582231..145582288,+ to FFCP PHASE1:Hg19::chr8:145582231..145582288,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79581 | |EntrezGene=79581 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30224 | |HGNC=30224 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HAB3,E9PKE4,E9PIX2,G1UCY1 | |UniProt=Q9HAB3,E9PKE4,E9PIX2,G1UCY1 | ||
|association_with_transcript=0bp_to_ENST00000329994,ENST00000402965,ENST00000526338,ENST00000532887,ENST00000533662,ENST00000534725,NM_001253815,NM_024531,NR_045600,uc003zcf.1,uc010mfy.1,uc011llc.1_5end | |||
|cluster_id=chr8:145582231..145582288,+ | |||
|coexpression_cluster_id=C887 | |||
|description=CAGE_peak_1_at_GPR172A_5end | |||
|id=chr8:145582231..145582288,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.84e-29!679;CL:0000004!3.84e-29!679;CL:0000255!3.84e-29!679;CL:0000012!3.55e-28!682;CL:0000220!1.37e-23!246;CL:0000066!1.51e-23!254;CL:0002321!3.67e-23!248;CL:0000003!4.41e-19!722;CL:0000144!6.13e-19!625;CL:0002371!2.63e-16!591;CL:0000055!1.07e-15!180;CL:0000222!2.53e-15!119;CL:0000063!3.54e-13!578;CL:0000192!6.53e-13!42;CL:0000514!6.53e-13!42;CL:0000359!2.38e-12!32;CL:0000183!7.40e-12!59;CL:0000680!1.63e-10!57;CL:0000056!1.63e-10!57;CL:0000355!1.63e-10!57;CL:0000187!2.34e-10!54;CL:0000393!2.17e-09!60;CL:0000211!2.17e-09!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.27e-11;32!CL:0000192;1.31e-09;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.71e-23,253;CL:0002321,2.26e-23,250;CL:0000222,1.83e-15,121;CL:0000192,8.00e-13,43;CL:0000514,8.00e-13,43;CL:0000359,2.38e-12,32;CL:0000680,1.70e-10,58;CL:0000056,1.70e-10,58;CL:0000355,1.70e-10,58;CL:0000187,2.46e-10,55;CL:0000393,2.20e-09,61;CL:0000211,2.20e-09,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.31e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.57e-13!216;UBERON:0003104!1.76e-12!238;UBERON:0009142!1.76e-12!238;UBERON:0003914!2.86e-12!118;UBERON:0001637!5.12e-12!42;UBERON:0003509!5.12e-12!42;UBERON:0004572!5.12e-12!42;UBERON:0000486!8.00e-12!82;UBERON:0005256!2.64e-11!143;UBERON:0004872!8.47e-11!84;UBERON:0002049!1.07e-10!79;UBERON:0007798!1.07e-10!79;UBERON:0000055!1.10e-10!69;UBERON:0001981!1.20e-10!60;UBERON:0007500!1.20e-10!60;UBERON:0004537!1.20e-10!60;UBERON:0006965!1.20e-10!60;UBERON:0000490!4.55e-10!138;UBERON:0004290!1.89e-09!70;UBERON:0004573!5.19e-09!33;UBERON:0004571!5.19e-09!33;UBERON:0000914!8.65e-09!83;UBERON:0002329!8.65e-09!83;UBERON:0003077!8.65e-09!83;UBERON:0003059!8.65e-09!83;UBERON:0007282!8.65e-09!83;UBERON:0009618!8.65e-09!83;UBERON:0007285!8.65e-09!83;UBERON:0001134!2.93e-08!61;UBERON:0002036!2.93e-08!61;UBERON:0003082!2.93e-08!61;UBERON:0002385!1.09e-07!63;UBERON:0001015!1.09e-07!63;UBERON:0000383!1.09e-07!63;UBERON:0001737!3.52e-07!9;UBERON:0000926!5.85e-07!448;UBERON:0004120!5.85e-07!448;UBERON:0006603!5.85e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.19e-08;42!UBERON:0003509;1.19e-08;42!UBERON:0004572;1.19e-08;42!UBERON:0004573;3.14e-08;33!UBERON:0004571;3.14e-08;33!UBERON:0003914;3.79e-08;74!UBERON:0001737;3.33e-07;9!UBERON:0001557;3.33e-07;9!UBERON:0007500;3.54e-07;56!UBERON:0001981;3.54e-07;56!UBERON:0004537;3.54e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.34e-14,199;UBERON:0003914,3.01e-12,117;UBERON:0001637,5.12e-12,42;UBERON:0003509,5.12e-12,42;UBERON:0004572,5.12e-12,42;UBERON:0000486,8.00e-12,83;UBERON:0007503,2.35e-11,78;UBERON:0000490,2.63e-11,148;UBERON:0004872,1.42e-10,83;UBERON:0002049,1.80e-10,78;UBERON:0007798,1.80e-10,78;UBERON:0000055,1.87e-10,68;UBERON:0007500,2.04e-10,59;UBERON:0001981,2.04e-10,59;UBERON:0004537,2.04e-10,59;UBERON:0006965,2.04e-10,59;UBERON:0002329,1.87e-09,71;UBERON:0003059,1.87e-09,71;UBERON:0007282,1.87e-09,71;UBERON:0004290,1.87e-09,71;UBERON:0009618,1.87e-09,71;UBERON:0005256,1.95e-09,122;UBERON:0003104,3.71e-09,160;UBERON:0009142,3.71e-09,160;UBERON:0004573,5.19e-09,33;UBERON:0004571,5.19e-09,33;UBERON:0007524,5.32e-09,73;UBERON:0003077,7.41e-09,72;UBERON:0007285,7.41e-09,72;UBERON:0001134,2.92e-08,62;UBERON:0002036,2.92e-08,62;UBERON:0003082,2.92e-08,62;UBERON:0002385,1.07e-07,64;UBERON:0001015,1.07e-07,64;UBERON:0000383,1.07e-07,64;UBERON:0001737,3.52e-07,9 | |||
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| ||
|short_description=p1@GPR172A | |||
}} | }} |
Latest revision as of 01:43, 17 September 2015
Short description: | p1@GPR172A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR172A_5end |
Coexpression cluster: | C887_Mesenchymal_Alveolar_Smooth_Renal_Fibroblast_leiomyoma_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000329994, ENST00000402965, ENST00000526338, ENST00000532887, ENST00000533662, ENST00000534725, NM_001253815, NM_024531, NR_045600, uc003zcf.1, uc010mfy.1, uc011llc.1_5end |
EntrezGene: | GPR172A |
HGNC: | 30224 |
UniProt: | Q9HAB3E9PKE4E9PIX2G1UCY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.71e-23 | 253 |
embryonic cell | 2.26e-23 | 250 |
mesodermal cell | 1.83e-15 | 121 |
smooth muscle cell | 8.00e-13 | 43 |
smooth muscle myoblast | 8.00e-13 | 43 |
vascular associated smooth muscle cell | 2.38e-12 | 32 |
muscle precursor cell | 1.70e-10 | 58 |
myoblast | 1.70e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.70e-10 | 58 |
muscle cell | 2.46e-10 | 55 |
electrically responsive cell | 2.20e-09 | 61 |
electrically active cell | 2.20e-09 | 61 |