FFCP PHASE1:Hg19::chr8:23399219..23399235,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:23399219..23399235,+ to FFCP PHASE1:Hg19::chr8:23399219..23399235,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51312 | |EntrezGene=51312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29786 | |HGNC=29786 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_ENST00000520949_5end | |||
|cluster_id=chr8:23399219..23399235,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_13_at_SLC25A37_5end | |||
|id=chr8:23399219..23399235,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.43e-25!45;CL:0002057!4.12e-24!42;CL:0000766!4.45e-15!76;CL:0002194!3.71e-14!63;CL:0000576!3.71e-14!63;CL:0000040!3.71e-14!63;CL:0000559!3.71e-14!63;CL:0002009!2.72e-13!65;CL:0000839!2.25e-11!70;CL:0000557!4.99e-11!71;CL:0000763!2.57e-07!112;CL:0000049!2.57e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.81e-78;33!CL:0002057;2.81e-78;33!CL:0000473;1.04e-53;39!CL:0000234;1.04e-53;39!CL:0000576;3.23e-39;48!CL:0000766;1.29e-24;69!CL:0000763;2.37e-12;100!CL:0002087;1.79e-09;104!CL:0000771;9.53e-09;2!CL:0000094;8.37e-08;8!CL:0000738;1.96e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.74e-75,42;CL:0002057,2.74e-75,42;CL:0000473,8.00e-65,48;CL:0000234,8.00e-65,48;CL:0000766,1.63e-52,72;CL:0002194,3.55e-50,59;CL:0000576,3.55e-50,59;CL:0000040,3.55e-50,59;CL:0000559,3.55e-50,59;CL:0002009,2.75e-48,61;CL:0000839,4.66e-44,66;CL:0000557,2.75e-43,67;CL:0000763,4.05e-32,108;CL:0000049,4.05e-32,108;CL:0000738,1.09e-23,136;CL:0002087,5.83e-22,115;CL:0002031,1.02e-20,120;CL:0002032,1.20e-18,161;CL:0000837,1.20e-18,161;CL:0000037,1.67e-17,168;CL:0000988,3.59e-16,177;CL:0000771,9.55e-09,2;CL:0000094,8.31e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;7.54e-55;42!CL:0000049;3.66e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.48e-15!112;UBERON:0002390!5.90e-14!102;UBERON:0003061!5.90e-14!102;UBERON:0002371!1.01e-09!80;UBERON:0001474!1.36e-08!86;UBERON:0004765!3.17e-08!101;UBERON:0001434!3.17e-08!101;UBERON:0003081!8.33e-08!216;UBERON:0002405!1.81e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.46e-14;15!UBERON:0000179;1.46e-14;15!UBERON:0000463;1.46e-14;15!UBERON:0002390;2.69e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.49e-49,98;UBERON:0003061,5.49e-49,98;UBERON:0002193,1.47e-43,108;UBERON:0002371,8.76e-40,76;UBERON:0001474,2.73e-36,82;UBERON:0004765,2.37e-32,90;UBERON:0002405,4.76e-31,93;UBERON:0001434,2.61e-28,100;UBERON:0003081,9.63e-20,203;UBERON:0000178,1.58e-14,15;UBERON:0000179,1.58e-14,15;UBERON:0000463,1.58e-14,15;UBERON:0002204,9.79e-14,167;UBERON:0000926,5.94e-10,315;UBERON:0004120,5.94e-10,315;UBERON:0006603,5.94e-10,315 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,1.00272223735071,0.217010870715852,0,0,0,1.89017710413434,3.02300754951048,1.21292030593908,1.85943229524548,1.23350366406548,1.85823822537062,4.60307827715441,6.66017836975662,7.33094912654614,1.72372840368309,4.51839278508678,8.12558919566051,2.63539275359647,1.36453075028923,1.34834090667051,2.14258724659632,2.24650318953266,1.91801137739712,2.30895910130701,3.78980949481101,5.11469700639233,4.06292934080018,3.97169657283798,5.60540024096017,5.27622197039161,3.65038042894141,5.64690996233303,3.02699751316684,4.05105399586321,3.16462387440884,0.211255286311942,0,0,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,1.04142150482278,0,0,0.550236083880135,0,0.258416759169329,0.71153252537342,0,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0.732806975721629,27.6738876615733,31.022421131866,0,0,0,0,0.573673241497627,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0,0.474541238222193,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49007023947182,0,16.1622050240054,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0.451199612907412,0.308061348417659,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0,0,0,1.66215201785745,0.447749509444357,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.768760269460425,0.638063562472921,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,1.08890984861323,0.376575203107117,0.86101074534246,0,0,0.918893600827838,6.5968189200182,5.35246044999663,11.3929437434833,4.04994018278241,6.58179636937911,11.6725196014689,8.10047155857172,5.55187623405989,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0.281338832821026,0.222617410045812,0.16480387422676,0,0,0,0,0.613612095012929,0,0,0.269605053441981,0.716084698702437,0,0,0,1.11136990144637,0,0,0,0,0,0,0,1.5255219017566,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.366390373607449,1.06606955203727,0,0.156980256395025,0,0,0.19606253431774,0,0,0,1.47698645169619,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0.664653872707185,1.98595173525299,4.08112793929393,2.38944859545918,0,1.52542140314453,0,0,0.957651272384428,0,0.171986032471617,0.0967563312890851,0.219267951258557,0.246346371159628,0,0,0.225980740780532,0.959293472527256,0.794858446811959,0,0.195551382734803,0.561111741760736,0,0,0,0,0,1.58460277786965,0.49701014226173,0,0.271808412147228,0.732219924186332,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,1.6896053843105,0.179287339332845,0.959575986597226,0,0,0,0,0,0,3.59190574687462,0.328370082997356,0.170388021785422,0.566560457600628,0,0,0.129282956361551,0.13223260174269,0.684347351537318,0.704815022316672,0.427149650270779,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0.499921631848426,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0.406870733204662,0,0.322231671127465,0,0,0,0,0,0,0,0.428883182749851,0,0,0.926089897295336,0.734210113519403,0.179088841081487,0,0.657852148736121,0.883445729729405,0.38582807654183,0.506827321959218,0,0,0.303859956177382,0,0,0,0,0.655219697692825,0.983091635014877,0.211312123358627,0,0.106691729694141,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0.1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| ||
|short_description=p13@SLC25A37 | |||
}} | }} |
Latest revision as of 14:23, 17 September 2015
Short description: | p13@SLC25A37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SLC25A37_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 19bp_to_ENST00000520949_5end |
EntrezGene: | SLC25A37 |
HGNC: | 29786 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.74e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.74e-75 | 42 |
defensive cell | 8.00e-65 | 48 |
phagocyte | 8.00e-65 | 48 |
myeloid leukocyte | 1.63e-52 | 72 |
monopoietic cell | 3.55e-50 | 59 |
monocyte | 3.55e-50 | 59 |
monoblast | 3.55e-50 | 59 |
promonocyte | 3.55e-50 | 59 |
macrophage dendritic cell progenitor | 2.75e-48 | 61 |
myeloid lineage restricted progenitor cell | 4.66e-44 | 66 |
granulocyte monocyte progenitor cell | 2.75e-43 | 67 |
myeloid cell | 4.05e-32 | 108 |
common myeloid progenitor | 4.05e-32 | 108 |
leukocyte | 1.09e-23 | 136 |
nongranular leukocyte | 5.83e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.02e-20 | 120 |
hematopoietic oligopotent progenitor cell | 1.20e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-18 | 161 |
hematopoietic stem cell | 1.67e-17 | 168 |
hematopoietic cell | 3.59e-16 | 177 |
eosinophil | 9.55e-09 | 2 |
granulocyte | 8.31e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.49e-49 | 98 |
blood island | 5.49e-49 | 98 |
hemolymphoid system | 1.47e-43 | 108 |
bone marrow | 8.76e-40 | 76 |
bone element | 2.73e-36 | 82 |
skeletal element | 2.37e-32 | 90 |
immune system | 4.76e-31 | 93 |
skeletal system | 2.61e-28 | 100 |
lateral plate mesoderm | 9.63e-20 | 203 |
blood | 1.58e-14 | 15 |
haemolymphatic fluid | 1.58e-14 | 15 |
organism substance | 1.58e-14 | 15 |
musculoskeletal system | 9.79e-14 | 167 |
mesoderm | 5.94e-10 | 315 |
mesoderm-derived structure | 5.94e-10 | 315 |
presumptive mesoderm | 5.94e-10 | 315 |