FFCP PHASE1:Hg19::chr8:94712752..94712857,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:94712752..94712857,+ to FFCP PHASE1:Hg19::chr8:94712752..94712857,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=137392 | |EntrezGene=137392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30452 | |HGNC=30452 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7P5,E5RHK0,E5RGD0,F5H8I5,A1XBS5 | |UniProt=F8W7P5,E5RHK0,E5RGD0,F5H8I5,A1XBS5 | ||
|association_with_transcript=0bp_to_ENST00000341186,ENST00000359421,ENST00000423990,ENST00000436526,ENST00000518116,ENST00000520937,ENST00000522324,ENST00000522803,ENST00000523577,ENST00000540007,NM_145269,uc003yfu.1,uc003yfv.3,uc010maq.2_5end | |||
|cluster_id=chr8:94712752..94712857,+ | |||
|description=CAGE_peak_1_at_FAM92A1_5end | |||
|id=chr8:94712752..94712857,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.33e-19!180;CL:0000220!3.13e-09!246;CL:0002321!3.37e-09!248;CL:0000057!5.50e-08!75;CL:0000133!1.31e-07!59;CL:0000333!7.26e-07!41 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.16e-09,250;CL:0000057,4.58e-08,76;CL:0000133,1.28e-07,59;CL:0000333,7.12e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.11e-18!365;UBERON:0000481!2.90e-13!347;UBERON:0000924!1.98e-12!173;UBERON:0006601!1.98e-12!173;UBERON:0000073!3.29e-12!94;UBERON:0001016!3.29e-12!94;UBERON:0004121!2.95e-11!169;UBERON:0000033!3.07e-11!123;UBERON:0001017!7.08e-10!82;UBERON:0005743!7.86e-10!86;UBERON:0000468!1.32e-09!659;UBERON:0000153!1.52e-09!129;UBERON:0007811!1.52e-09!129;UBERON:0000955!3.02e-09!69;UBERON:0006238!3.02e-09!69;UBERON:0000483!7.43e-09!309;UBERON:0000119!7.90e-09!312;UBERON:0001869!4.10e-08!32;UBERON:0002346!7.40e-08!90;UBERON:0000956!1.21e-07!25;UBERON:0000203!1.21e-07!25;UBERON:0000914!2.08e-07!83;UBERON:0002329!2.08e-07!83;UBERON:0003077!2.08e-07!83;UBERON:0003059!2.08e-07!83;UBERON:0007282!2.08e-07!83;UBERON:0009618!2.08e-07!83;UBERON:0007285!2.08e-07!83;UBERON:0000922!2.54e-07!612;UBERON:0002020!3.73e-07!34;UBERON:0003528!3.73e-07!34;UBERON:0001893!4.23e-07!34;UBERON:0004458!4.36e-07!49;UBERON:0002050!4.40e-07!605;UBERON:0005423!4.40e-07!605;UBERON:0002780!5.13e-07!41;UBERON:0001890!5.13e-07!41;UBERON:0006240!5.13e-07!41;UBERON:0000923!5.37e-07!604;UBERON:0005291!5.37e-07!604;UBERON:0006598!5.37e-07!604;UBERON:0002532!5.37e-07!604;UBERON:0002791!6.11e-07!33;UBERON:0003080!6.65e-07!42;UBERON:0003075!9.71e-07!86;UBERON:0007284!9.71e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.15e-07;32!UBERON:0000956;1.20e-07;25!UBERON:0000203;1.20e-07;25!UBERON:0002791;3.98e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.91e-12,171;UBERON:0000924,1.91e-12,171;UBERON:0006601,1.91e-12,171;UBERON:0001016,2.16e-12,89;UBERON:0010314,3.05e-10,132;UBERON:0001017,5.68e-10,81;UBERON:0000955,2.37e-09,68;UBERON:0006238,2.37e-09,68;UBERON:0000483,1.86e-08,306;UBERON:0000119,1.97e-08,309;UBERON:0001869,4.00e-08,32;UBERON:0000956,1.18e-07,25;UBERON:0000203,1.18e-07,25;UBERON:0011216,1.34e-07,223;UBERON:0002791,1.89e-07,32;UBERON:0003528,3.65e-07,34;UBERON:0002020,3.65e-07,34;UBERON:0002346,3.98e-07,86;UBERON:0001893,4.14e-07,34;UBERON:0004458,4.27e-07,49;UBERON:0002780,5.02e-07,41;UBERON:0001890,5.02e-07,41;UBERON:0003080,5.02e-07,41;UBERON:0006240,5.02e-07,41 | |||
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| ||
|short_description=p1@FAM92A1 | |||
}} | }} |
Latest revision as of 12:21, 19 September 2015
Short description: | p1@FAM92A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM92A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000341186, ENST00000359421, ENST00000423990, ENST00000436526, ENST00000518116, ENST00000520937, ENST00000522324, ENST00000522803, ENST00000523577, ENST00000540007, NM_145269, uc003yfu.1, uc003yfv.3, uc010maq.2_5end |
EntrezGene: | FAM92A1 |
HGNC: | 30452 |
UniProt: | F8W7P5E5RHK0E5RGD0F5H8I5A1XBS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.16e-09 | 250 |
fibroblast | 4.58e-08 | 76 |
neurectodermal cell | 1.28e-07 | 59 |
migratory neural crest cell | 7.12e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.91e-12 | 171 |
ectoderm | 1.91e-12 | 171 |
presumptive ectoderm | 1.91e-12 | 171 |
nervous system | 2.16e-12 | 89 |
structure with developmental contribution from neural crest | 3.05e-10 | 132 |
central nervous system | 5.68e-10 | 81 |
brain | 2.37e-09 | 68 |
future brain | 2.37e-09 | 68 |
epithelium | 1.86e-08 | 306 |
cell layer | 1.97e-08 | 309 |
cerebral hemisphere | 4.00e-08 | 32 |
cerebral cortex | 1.18e-07 | 25 |
pallium | 1.18e-07 | 25 |
organ system subdivision | 1.34e-07 | 223 |
regional part of telencephalon | 1.89e-07 | 32 |
brain grey matter | 3.65e-07 | 34 |
gray matter | 3.65e-07 | 34 |
neurectoderm | 3.98e-07 | 86 |
telencephalon | 4.14e-07 | 34 |
body cavity or lining | 4.27e-07 | 49 |
regional part of forebrain | 5.02e-07 | 41 |
forebrain | 5.02e-07 | 41 |
anterior neural tube | 5.02e-07 | 41 |
future forebrain | 5.02e-07 | 41 |