FFCP PHASE1:Hg19::chr9:114937676..114937698,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:114937676..114937698,- to FFCP PHASE1:Hg19::chr9:114937676..114937698,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64420 | |EntrezGene=64420 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25413 | |HGNC=25413 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UWL2 | |UniProt=Q6UWL2 | ||
|association_with_transcript=0bp_to_ENST00000374270_5end | |||
|cluster_id=chr9:114937676..114937698,- | |||
|description=CAGE_peak_4_at_SUSD1_5end | |||
|id=chr9:114937676..114937698,- | |||
|ontology_enrichment_celltype=CL:0000557!2.48e-26!71;CL:0000839!2.91e-26!70;CL:0000766!1.62e-25!76;CL:0002194!2.10e-25!63;CL:0000576!2.10e-25!63;CL:0000040!2.10e-25!63;CL:0000559!2.10e-25!63;CL:0002009!9.72e-24!65;CL:0002057!1.07e-21!42;CL:0000763!1.02e-18!112;CL:0000049!1.02e-18!112;CL:0000860!5.14e-18!45;CL:0002078!2.39e-09!44;CL:0000115!5.62e-09!35 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.02e-23;39!CL:0000234;3.02e-23;39!CL:0000860;3.65e-22;33!CL:0002057;3.65e-22;33!CL:0000576;1.04e-20;48!CL:0000766;3.25e-16;69!CL:0000763;1.19e-08;100!CL:0000115;6.09e-08;36!CL:1000449;1.47e-07;15!CL:0000235;7.45e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.78e-37,67;CL:0000766,9.50e-37,72;CL:0000839,1.41e-36,66;CL:0002194,5.17e-36,59;CL:0000576,5.17e-36,59;CL:0000040,5.17e-36,59;CL:0000559,5.17e-36,59;CL:0002009,5.61e-34,61;CL:0000473,8.43e-34,48;CL:0000234,8.43e-34,48;CL:0000860,2.00e-28,42;CL:0002057,2.00e-28,42;CL:0000763,3.05e-26,108;CL:0000049,3.05e-26,108;CL:0000738,3.18e-11,136;CL:0002087,2.55e-10,115;CL:0002031,2.78e-10,120;CL:0002032,1.60e-09,161;CL:0000837,1.60e-09,161;CL:0000037,1.64e-09,168;CL:0000115,2.95e-09,36;CL:0000988,3.42e-09,177;CL:0002078,5.00e-09,45;CL:1000449,2.74e-07,15;CL:0000235,7.93e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;5.84e-21;42!CL:0000049;1.97e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!9.69e-23!216;UBERON:0002371!2.20e-22!80;UBERON:0002193!5.57e-21!112;UBERON:0002405!1.68e-19!115;UBERON:0002390!3.87e-19!102;UBERON:0003061!3.87e-19!102;UBERON:0001474!7.83e-19!86;UBERON:0004765!2.41e-16!101;UBERON:0001434!2.41e-16!101;UBERON:0000926!1.13e-10!448;UBERON:0004120!1.13e-10!448;UBERON:0006603!1.13e-10!448;UBERON:0000480!1.54e-10!626;UBERON:0000467!1.75e-10!625;UBERON:0002204!5.80e-10!167;UBERON:0000468!9.99e-10!659;UBERON:0002050!2.52e-08!605;UBERON:0005423!2.52e-08!605;UBERON:0000062!2.55e-08!511;UBERON:0000923!3.51e-08!604;UBERON:0005291!3.51e-08!604;UBERON:0006598!3.51e-08!604;UBERON:0002532!3.51e-08!604;UBERON:0000922!4.31e-08!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.47e-07;15!UBERON:0004819;1.47e-07;15!UBERON:0001285;1.47e-07;15!UBERON:0007684;1.47e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.32e-32,76;UBERON:0002405,2.21e-31,93;UBERON:0002193,1.14e-30,108;UBERON:0002390,8.44e-29,98;UBERON:0003061,8.44e-29,98;UBERON:0001474,8.68e-28,82;UBERON:0003081,7.11e-27,203;UBERON:0004765,1.59e-23,90;UBERON:0001434,3.05e-19,100;UBERON:0000926,7.93e-14,315;UBERON:0004120,7.93e-14,315;UBERON:0006603,7.93e-14,315;UBERON:0002204,9.01e-09,167;UBERON:0006555,9.76e-08,16;UBERON:0004819,9.76e-08,16;UBERON:0004211,2.74e-07,15;UBERON:0009773,2.74e-07,15;UBERON:0001231,2.74e-07,15;UBERON:0001285,2.74e-07,15;UBERON:0007684,2.74e-07,15;UBERON:0004208,2.74e-07,15 | |||
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| ||
|short_description=p4@SUSD1 | |||
}} | }} |
Latest revision as of 05:29, 20 September 2015
Short description: | p4@SUSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SUSD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374270_5end |
EntrezGene: | SUSD1 |
HGNC: | 25413 |
UniProt: | Q6UWL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.78e-37 | 67 |
myeloid leukocyte | 9.50e-37 | 72 |
myeloid lineage restricted progenitor cell | 1.41e-36 | 66 |
monopoietic cell | 5.17e-36 | 59 |
monocyte | 5.17e-36 | 59 |
monoblast | 5.17e-36 | 59 |
promonocyte | 5.17e-36 | 59 |
macrophage dendritic cell progenitor | 5.61e-34 | 61 |
defensive cell | 8.43e-34 | 48 |
phagocyte | 8.43e-34 | 48 |
classical monocyte | 2.00e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.00e-28 | 42 |
myeloid cell | 3.05e-26 | 108 |
common myeloid progenitor | 3.05e-26 | 108 |
leukocyte | 3.18e-11 | 136 |
nongranular leukocyte | 2.55e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.78e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.60e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-09 | 161 |
hematopoietic stem cell | 1.64e-09 | 168 |
endothelial cell | 2.95e-09 | 36 |
hematopoietic cell | 3.42e-09 | 177 |
meso-epithelial cell | 5.00e-09 | 45 |
epithelial cell of nephron | 2.74e-07 | 15 |
macrophage | 7.93e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.32e-32 | 76 |
immune system | 2.21e-31 | 93 |
hemolymphoid system | 1.14e-30 | 108 |
hematopoietic system | 8.44e-29 | 98 |
blood island | 8.44e-29 | 98 |
bone element | 8.68e-28 | 82 |
lateral plate mesoderm | 7.11e-27 | 203 |
skeletal element | 1.59e-23 | 90 |
skeletal system | 3.05e-19 | 100 |
mesoderm | 7.93e-14 | 315 |
mesoderm-derived structure | 7.93e-14 | 315 |
presumptive mesoderm | 7.93e-14 | 315 |
musculoskeletal system | 9.01e-09 | 167 |
excretory tube | 9.76e-08 | 16 |
kidney epithelium | 9.76e-08 | 16 |
nephron epithelium | 2.74e-07 | 15 |
renal tubule | 2.74e-07 | 15 |
nephron tubule | 2.74e-07 | 15 |
nephron | 2.74e-07 | 15 |
uriniferous tubule | 2.74e-07 | 15 |
nephrogenic mesenchyme | 2.74e-07 | 15 |