FFCP PHASE1:Hg19::chr9:86571472..86571485,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:86571472..86571485,- to FFCP PHASE1:Hg19::chr9:86571472..86571485,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84267 | |EntrezGene=84267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28144 | |HGNC=28144 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T6V5 | |UniProt=Q5T6V5 | ||
|association_with_transcript=146bp_to_ENST00000376344_5end | |||
|cluster_id=chr9:86571472..86571485,- | |||
|description=CAGE_peak_4_at_C9orf64_5end | |||
|id=chr9:86571472..86571485,- | |||
|ontology_enrichment_celltype=CL:0000066!7.36e-14!254 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.98e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.47e-21,253;CL:0000223,1.55e-08,58;CL:0000182,3.15e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.50e-14;29!UBERON:0006595;2.79e-08;86!UBERON:0001041;1.17e-07;30!UBERON:0009497;1.43e-07;13 | |||
|ontology_enrichment_disease=DOID:305!5.42e-19!106;DOID:0050687!6.84e-15!143;DOID:14566!1.55e-07!239;DOID:162!1.79e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:305;1.39e-10;106!DOID:299;5.62e-08;25!DOID:3493;1.76e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.19e-38,106;DOID:0050687,2.04e-28,143;DOID:162,1.31e-20,235;DOID:14566,6.56e-20,239;DOID:299,5.91e-08,25;DOID:3493,1.87e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.93e-09!169;UBERON:0000925!1.93e-09!169;UBERON:0006595!1.93e-09!169;UBERON:0001737!2.58e-08!9;UBERON:0001007!2.83e-08!155;UBERON:0001555!2.83e-08!155;UBERON:0007026!2.83e-08!155;UBERON:0003929!3.25e-08!54;UBERON:0005911!3.87e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.31e-26;9!UBERON:0001557;1.31e-26;9!UBERON:0000072;6.96e-12;37!UBERON:0000065;2.63e-11;44!UBERON:0002423;1.52e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.60e-26,9;UBERON:0004119,9.82e-17,160;UBERON:0000925,9.82e-17,160;UBERON:0006595,9.82e-17,160;UBERON:0004921,1.71e-16,118;UBERON:0001007,5.58e-16,145;UBERON:0001555,5.58e-16,145;UBERON:0007026,5.58e-16,145;UBERON:0001041,1.99e-14,87;UBERON:0008947,4.51e-12,38;UBERON:0003258,4.51e-12,38;UBERON:0001557,1.56e-11,19;UBERON:0000065,6.41e-10,54;UBERON:0005911,1.24e-09,82;UBERON:0000072,4.12e-09,47;UBERON:0003929,3.92e-08,54;UBERON:0009497,1.28e-07,25;UBERON:0000015,1.28e-07,25;UBERON:0002423,1.28e-07,25;UBERON:0006235,1.28e-07,25;UBERON:0004161,1.28e-07,25;UBERON:0001048,1.35e-07,160;UBERON:0001004,3.93e-07,74;UBERON:0008835,4.23e-07,22;UBERON:0003894,4.23e-07,22;UBERON:0009854,9.88e-07,23 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.140954404095971,0,0,0,0,1.26343974685366,0,0.491467873003018,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0.136874425072884,0,1.06978768047132,0.821005894499457,0.472264687882075,0,0,0,0,0.30120591877825,0,0,0,0,0.553995408531877,0,0,0.223915474239924,0.32389366601898,0.257575567634187,1.01778767145695,0,0.727752183563449,0.232429036905685,0,0.309706370895104,0.575384784644301,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0.622822248995575,0,1.0429658368404,0,0,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0.318565414324097,0.651083453856419,0.950452044448374,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0.383587685530591,0,0,0.434539556882471,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.261958150995425,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0.267899184852239,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.379891534993739,0,0,0,0.560677600142307,1.06748995729705,0,0,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0,0.23486899728753,0.323745888736263,0.421352420106746,0.408308342509787,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0.505008341862199,0,0,0,0.30648779579902,0,0.226864366320042,0.358779271377724,0.213557388818567,0.211931901159562,0,0.309157587715317,0.257640540045629,0,0.168776332241266,0.292311015483596,0.504867548488229,0.552299391853796,0.161646056818812,0.355009592516614,0.705264687593482,0.169560592310488,0.966304265816484,0.545492241181669,0.860413786167011,0,0.397589304964456,0,0.207322110030741,0,0,0,0,0,0,0,3.54920400119532,4.38320194203064,3.85617647813571,3.52940712743661,4.79334777003293,3.08451804844426,3.10112008768378,3.92442930250692,3.46272441251751,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,1.77236972004421,0,2.45976877086227,0,0.219500570817251,0,0.201057944823262,0.370353780634118,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0.335964256397719,0.425325291727159,0.53735113621709,0.290633938513962,0.383382679165211,0,0.176096868026452,0,0.288239906833923,0.12624243342638,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,1.04007436911366,0,0,0.532844358032199,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0.672510863961164,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0.356857977594324,0.315404830067869,0.35142424497814,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0.606255142892519,0,0,0.496215615637554,0.306923946576125,0.280660094433074,0.256278298511402,0,0.482561763430822,0,0.462629081407967,0,0.164254312027618,0,0,2.1754700926492,0,0.552485933615378,0.459257792658427,0.182091168006717,0,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0.254876273045038,1.66215201785745,0.223874754722178,1.53481913652154,0.784306353074702,0.256450125116389,0.328014645699706,0,0.824328093181778,0.366277859273374,0.495056999523528,0.574265537996172,0,0,0.290012154876366,0.154048617114644,0,0.413509717453592,0.537101224341368,0.435050081742686,0.0852266274161009,0.267096106940212,1.4875642382488,0.960950336825531,0.382838137483752,1.0115778085555,0.464845549297286,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0.842516912477962,0,0,0,0.272999822815972,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0.430234056612155,0.294747123039363,0.35667105148125,0,0.211107635297664,0,0,0,0.962221127255121,0,2.17781969722645,0.941438007767792,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0.764637207142375,0,0,0,0,0.540031437238115,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,1.53620382154229,0.447352215784832,0.834245708559542,0,0.278406173895242,0,0,0,0,3.55567026775618,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0.333926115068718,1.97764649072111,0.422250816255987,0.19924798825107,0,0,0,0.123084805461069,0.311039587661807,0.539210106883961,2.68531762013414,0,0.0986434056369336,0,0,0,0,0,3.64598865519327,0.699679999969566,0.724999575434793,0.455173793141999,0.254253650292766,0.236387681767936,0,0,0.520874984799877,0,0,0,0,0,0,1.52513848926586,0.139423744278603,0.153900517007594,0,0,0.179515288819544,0.325942115766024,0.957003479195758,0.36639037360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| ||
|short_description=p4@C9orf64 | |||
}} | }} |
Latest revision as of 00:27, 18 September 2015
Short description: | p4@C9orf64 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C9orf64_5end |
Coexpression cluster: | NA |
Association with transcript: | 146bp_to_ENST00000376344_5end |
EntrezGene: | C9orf64 |
HGNC: | 28144 |
UniProt: | Q5T6V5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.47e-21 | 253 |
endodermal cell | 1.55e-08 | 58 |
hepatocyte | 3.15e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.60e-26 | 9 |
endoderm-derived structure | 9.82e-17 | 160 |
endoderm | 9.82e-17 | 160 |
presumptive endoderm | 9.82e-17 | 160 |
subdivision of digestive tract | 1.71e-16 | 118 |
digestive system | 5.58e-16 | 145 |
digestive tract | 5.58e-16 | 145 |
primitive gut | 5.58e-16 | 145 |
foregut | 1.99e-14 | 87 |
respiratory primordium | 4.51e-12 | 38 |
endoderm of foregut | 4.51e-12 | 38 |
upper respiratory tract | 1.56e-11 | 19 |
respiratory tract | 6.41e-10 | 54 |
endo-epithelium | 1.24e-09 | 82 |
segment of respiratory tract | 4.12e-09 | 47 |
gut epithelium | 3.92e-08 | 54 |
epithelium of foregut-midgut junction | 1.28e-07 | 25 |
anatomical boundary | 1.28e-07 | 25 |
hepatobiliary system | 1.28e-07 | 25 |
foregut-midgut junction | 1.28e-07 | 25 |
septum transversum | 1.28e-07 | 25 |
primordium | 1.35e-07 | 160 |
respiratory system | 3.93e-07 | 74 |
hepatic diverticulum | 4.23e-07 | 22 |
liver primordium | 4.23e-07 | 22 |
digestive tract diverticulum | 9.88e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.19e-38 | 106 |
cell type cancer | 2.04e-28 | 143 |
cancer | 1.31e-20 | 235 |
disease of cellular proliferation | 6.56e-20 | 239 |
adenocarcinoma | 5.91e-08 | 25 |
signet ring cell adenocarcinoma | 1.87e-07 | 2 |