FFCP PHASE1:Hg19::chrX:136648768..136648781,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:136648768..136648781,+ to FFCP PHASE1:Hg19::chrX:136648768..136648781,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7547 | |EntrezGene=7547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12874 | |HGNC=12874 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JY75 | |UniProt=Q5JY75 | ||
|association_with_transcript=91bp_to_ENST00000370606_5end | |||
|cluster_id=chrX:136648768..136648781,+ | |||
|coexpression_cluster_id=C595 | |||
|description=CAGE_peak_6_at_ZIC3_5end | |||
|id=chrX:136648768..136648781,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.12e-20!5;CL:0000133!1.64e-12!59;CL:0000064!1.69e-12!3;CL:0005012!1.69e-12!3;CL:0000067!1.69e-12!3;CL:0002304!1.69e-12!3;CL:0002603!2.48e-12!3;CL:0000708!8.98e-12!3;CL:0000075!2.42e-10!27;CL:0000221!7.66e-10!71;CL:0000306!2.04e-09!4;CL:0002222!2.04e-09!4;CL:0002224!2.04e-09!4;CL:0000039!3.79e-09!7;CL:0000586!3.79e-09!7;CL:0000128!7.27e-09!7;CL:0000126!7.27e-09!7;CL:0000127!7.27e-09!7;CL:0002453!7.27e-09!7;CL:0000333!3.87e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.41e-55;5!CL:0000075;1.98e-19;27!CL:0002321;1.40e-18;15!CL:0000064;1.65e-15;3!CL:0000067;1.65e-15;3!CL:0005012;1.65e-15;3!CL:0002304;1.65e-15;3!CL:0002603;1.65e-15;3!CL:0000039;1.27e-14;7!CL:0000586;1.27e-14;7!CL:0000710;8.86e-14;20!CL:0000306;4.83e-12;4!CL:0002222;4.83e-12;4!CL:0002224;4.83e-12;4!CL:0000148;1.14e-10;10!CL:0002077;5.10e-08;34!CL:0000147;9.13e-08;14!CL:0000128;3.67e-07;7!CL:0000126;3.67e-07;7!CL:0000127;3.67e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.05e-56,5;CL:0000075,1.95e-19,27;CL:0002603,1.22e-15,3;CL:0000064,1.91e-15,3;CL:0000067,1.91e-15,3;CL:0005012,1.91e-15,3;CL:0002304,1.91e-15,3;CL:0000039,1.57e-14,7;CL:0000586,1.57e-14,7;CL:0000710,8.28e-14,20;CL:0000306,5.40e-12,4;CL:0002222,5.40e-12,4;CL:0002224,5.40e-12,4;CL:0000148,9.87e-11,10;CL:0000541,9.87e-11,10;CL:0000133,1.08e-10,59;CL:0000221,1.17e-08,72;CL:0002077,4.40e-08,34;CL:0000147,8.22e-08,14;CL:0000128,3.24e-07,7;CL:0000126,3.24e-07,7;CL:0000127,3.24e-07,7;CL:0002453,3.24e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.35e-18;10!UBERON:0005564;6.35e-18;10!CL:0000133;3.60e-07;59 | |||
|ontology_enrichment_disease=DOID:3095!6.47e-13!22;DOID:2994!6.47e-13!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.38e-12;22!DOID:2994;1.38e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.55e-12,22;DOID:2994,1.55e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0003075!6.63e-24!86;UBERON:0007284!6.63e-24!86;UBERON:0001017!9.80e-23!82;UBERON:0003076!1.08e-22!15;UBERON:0003057!1.08e-22!15;UBERON:0002346!1.46e-22!90;UBERON:0000073!1.60e-22!94;UBERON:0001016!1.60e-22!94;UBERON:0005743!2.06e-21!86;UBERON:0004121!5.48e-18!169;UBERON:0001049!1.14e-17!57;UBERON:0005068!1.14e-17!57;UBERON:0006241!1.14e-17!57;UBERON:0007135!1.14e-17!57;UBERON:0000924!2.16e-17!173;UBERON:0006601!2.16e-17!173;UBERON:0002037!1.46e-15!6;UBERON:0006215!1.46e-15!6;UBERON:0002616!5.16e-15!59;UBERON:0002680!2.40e-14!9;UBERON:0001895!2.40e-14!9;UBERON:0010092!2.40e-14!9;UBERON:0004733!4.32e-14!12;UBERON:0002028!4.32e-14!12;UBERON:0007277!4.32e-14!12;UBERON:0004732!6.21e-13!13;UBERON:0001778!1.69e-12!3;UBERON:0001775!1.69e-12!3;UBERON:0007625!2.50e-12!11;UBERON:0000955!4.79e-12!69;UBERON:0006238!4.79e-12!69;UBERON:0002240!6.41e-12!3;UBERON:0003210!8.98e-12!3;UBERON:0000033!5.39e-11!123;UBERON:0000153!3.07e-10!129;UBERON:0007811!3.07e-10!129;UBERON:0003056!8.29e-10!61;UBERON:0001801!1.55e-09!14;UBERON:0000488!1.77e-09!4;UBERON:0010077!2.04e-09!4;UBERON:0005389!2.04e-09!4;UBERON:0000484!2.04e-09!4;UBERON:0002546!2.04e-09!4;UBERON:0000965!2.04e-09!4;UBERON:0001803!2.04e-09!4;UBERON:0003073!2.04e-09!4;UBERON:0005426!2.04e-09!4;UBERON:0002200!1.16e-08!11;UBERON:0006876!1.16e-08!11;UBERON:0002360!4.07e-08!2;UBERON:0000094!4.07e-08!2;UBERON:0007645!4.07e-08!2;UBERON:0000473!5.27e-08!8;UBERON:0005174!2.55e-07!5;UBERON:0001137!2.55e-07!5;UBERON:0000019!7.65e-07!19;UBERON:0000047!7.65e-07!19;UBERON:0004088!7.65e-07!19;UBERON:0003072!7.65e-07!19;UBERON:0003071!7.65e-07!19;UBERON:0004128!7.65e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;3.09e-16;11!UBERON:0001778;1.65e-15;3!UBERON:0001775;1.65e-15;3!UBERON:0000473;7.16e-13;8!UBERON:0001801;8.13e-13;14!UBERON:0010077;4.83e-12;4!UBERON:0005389;4.83e-12;4!UBERON:0000484;4.83e-12;4!UBERON:0000965;4.83e-12;4!UBERON:0001803;4.83e-12;4!UBERON:0000488;7.11e-12;4!UBERON:0003135;1.63e-09;11!UBERON:0000019;1.67e-09;19!UBERON:0000047;1.67e-09;19!UBERON:0004088;1.67e-09;19!UBERON:0010230;1.67e-09;19!UBERON:0000970;4.88e-09;20!UBERON:0000991;1.16e-08;21!UBERON:0002104;1.29e-08;21!UBERON:0001456;1.29e-08;21!UBERON:0002037;3.25e-08;6!UBERON:0002203;3.25e-08;6!UBERON:0001768;3.25e-08;6!UBERON:0002200;3.25e-08;6!UBERON:0000922;4.23e-08;49!UBERON:0000020;6.97e-08;23!UBERON:0001032;1.46e-07;24!UBERON:0004456;1.46e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,3.63e-16,11;UBERON:0001778,1.91e-15,3;UBERON:0001775,1.91e-15,3;UBERON:0000473,8.60e-13,8;UBERON:0001801,9.21e-13,14;UBERON:0010077,5.40e-12,4;UBERON:0005389,5.40e-12,4;UBERON:0000484,5.40e-12,4;UBERON:0002546,5.40e-12,4;UBERON:0000965,5.40e-12,4;UBERON:0001803,5.40e-12,4;UBERON:0003073,5.40e-12,4;UBERON:0005426,5.40e-12,4;UBERON:0000488,7.95e-12,4;UBERON:0003135,1.86e-09,11;UBERON:0000019,5.31e-09,20;UBERON:0000047,5.31e-09,20;UBERON:0010312,5.31e-09,20;UBERON:0004088,5.31e-09,20;UBERON:0010230,5.31e-09,20;UBERON:0003072,5.31e-09,20;UBERON:0004128,5.31e-09,20;UBERON:0003071,5.31e-09,20;UBERON:0000991,1.26e-08,21;UBERON:0009196,1.26e-08,21;UBERON:0009117,1.26e-08,21;UBERON:0005564,1.26e-08,21;UBERON:0000970,1.40e-08,21;UBERON:0002104,1.40e-08,21;UBERON:0002037,2.81e-08,6;UBERON:0006215,2.81e-08,6;UBERON:0004176,3.05e-08,22;UBERON:0001456,3.36e-08,22;UBERON:0002203,3.50e-08,6;UBERON:0001768,3.50e-08,6;UBERON:0002200,3.50e-08,6;UBERON:0000020,1.57e-07,24;UBERON:0001032,1.57e-07,24;UBERON:0004456,1.57e-07,24 | |||
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| ||
|short_description=p6@ZIC3 | |||
}} | }} |
Latest revision as of 15:53, 19 September 2015
Short description: | p6@ZIC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ZIC3_5end |
Coexpression cluster: | C595_teratocarcinoma_HES3GFP_H9_testicular_Wilms_hepatoblastoma_neuroblastoma |
Association with transcript: | 91bp_to_ENST00000370606_5end |
EntrezGene: | ZIC3 |
HGNC: | 12874 |
UniProt: | Q5JY75 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.05e-56 | 5 |
columnar/cuboidal epithelial cell | 1.95e-19 | 27 |
astrocyte of the cerebellum | 1.22e-15 | 3 |
ciliated cell | 1.91e-15 | 3 |
ciliated epithelial cell | 1.91e-15 | 3 |
multi-ciliated epithelial cell | 1.91e-15 | 3 |
non-pigmented ciliary epithelial cell | 1.91e-15 | 3 |
germ line cell | 1.57e-14 | 7 |
germ cell | 1.57e-14 | 7 |
neurecto-epithelial cell | 8.28e-14 | 20 |
crystallin accumulating cell | 5.40e-12 | 4 |
vertebrate lens cell | 5.40e-12 | 4 |
lens epithelial cell | 5.40e-12 | 4 |
melanocyte | 9.87e-11 | 10 |
melanoblast | 9.87e-11 | 10 |
neurectodermal cell | 1.08e-10 | 59 |
ectodermal cell | 1.17e-08 | 72 |
ecto-epithelial cell | 4.40e-08 | 34 |
pigment cell | 8.22e-08 | 14 |
oligodendrocyte | 3.24e-07 | 7 |
macroglial cell | 3.24e-07 | 7 |
astrocyte | 3.24e-07 | 7 |
oligodendrocyte precursor cell | 3.24e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.55e-12 | 22 |
germ cell cancer | 1.55e-12 | 22 |