FFCP PHASE1:Hg19::chrX:9754333..9754356,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:9754333..9754356,- to FFCP PHASE1:Hg19::chrX:9754333..9754356,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4935 | |EntrezGene=4935 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20145 | |HGNC=20145 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000447366_5end | |||
|cluster_id=chrX:9754333..9754356,- | |||
|description=CAGE_peak_3_at_GPR143_5end | |||
|id=chrX:9754333..9754356,- | |||
|ontology_enrichment_celltype=CL:0000066!9.54e-19!254;CL:0002139!1.67e-10!24;CL:0000213!2.03e-10!57;CL:0000215!2.03e-10!57;CL:0000076!1.44e-09!62;CL:0000147!8.47e-08!14;CL:0002078!9.52e-08!44;CL:0000115!1.00e-07!35;CL:0000071!4.08e-07!18;CL:0002546!4.08e-07!18;CL:0000148!5.69e-07!10;CL:0000541!5.69e-07!10;CL:1000507!9.26e-07!12;CL:1000494!9.26e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.83e-16;19!CL:0002322;1.13e-10;5!CL:0002139;5.64e-09;24!CL:1000449;6.84e-09;15!CL:0002681;9.15e-09;12!CL:0002584;9.15e-09;12!CL:0002577;1.68e-08;3!CL:0002541;2.76e-08;3!CL:1000507;4.05e-08;10!CL:1000494;4.05e-08;10!CL:1000497;1.15e-07;17!CL:0002518;1.15e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.65e-16,19;CL:0000066,2.10e-12,253;CL:0002322,5.03e-11,5;CL:1000449,7.15e-09,15;CL:0002078,7.33e-09,45;CL:0002139,9.50e-09,24;CL:0002681,1.08e-08,12;CL:0002584,1.08e-08,12;CL:0002577,1.69e-08,3;CL:0002541,2.00e-08,3;CL:0000213,4.20e-08,58;CL:0000215,4.20e-08,58;CL:1000507,5.76e-08,10;CL:1000494,5.76e-08,10;CL:1000497,1.19e-07,17;CL:0002518,1.19e-07,17;CL:0000115,1.80e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.70e-07!27;DOID:193!2.26e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:299;1.35e-07;25!DOID:120;9.05e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:299,8.84e-08,25;DOID:120,6.79e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0003133!4.69e-10!48;UBERON:0005631!5.13e-10!14;UBERON:0000158!5.13e-10!14;UBERON:0004111!6.13e-10!241;UBERON:0005156!1.39e-09!59;UBERON:0000990!1.39e-09!59;UBERON:0001008!2.22e-09!45;UBERON:0006554!7.92e-09!44;UBERON:0003124!5.18e-08!7;UBERON:0000489!9.44e-08!32;UBERON:0004876!1.04e-07!20;UBERON:0000080!1.11e-07!18;UBERON:0002120!1.11e-07!18;UBERON:0004875!1.11e-07!18;UBERON:0005721!1.11e-07!18;UBERON:0005754!1.11e-07!18;UBERON:0007297!1.11e-07!18;UBERON:0003064!1.25e-07!37;UBERON:0004176!1.31e-07!22;UBERON:0003886!1.86e-07!63;UBERON:0002113!2.03e-07!27;UBERON:0003918!2.03e-07!27;UBERON:0005095!2.03e-07!27;UBERON:0007687!2.03e-07!27;UBERON:0003134!2.27e-07!37;UBERON:0000474!2.27e-07!37;UBERON:0006555!2.77e-07!17;UBERON:0005103!2.77e-07!17;UBERON:0000083!2.77e-07!17;UBERON:0009201!2.77e-07!17;UBERON:0004819!2.77e-07!17;UBERON:0006553!2.77e-07!17;UBERON:0003074!2.77e-07!17;UBERON:0003060!2.77e-07!17;UBERON:0000991!3.06e-07!21;UBERON:0009196!3.06e-07!21;UBERON:0009117!3.06e-07!21;UBERON:0005564!3.06e-07!21;UBERON:0000025!3.46e-07!194;UBERON:0000468!3.72e-07!659;UBERON:0007023!3.85e-07!115;UBERON:0001986!4.08e-07!18;UBERON:0004638!4.08e-07!18;UBERON:0004852!4.08e-07!18;UBERON:0002553!4.70e-07!70;UBERON:0000487!7.28e-07!22;UBERON:0009773!9.26e-07!12;UBERON:0001231!9.26e-07!12;UBERON:0004810!9.26e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.72e-15;10!UBERON:0000158;6.72e-15;10!UBERON:0000478;2.51e-14;24!UBERON:0001987;2.78e-10;4!UBERON:0006554;7.19e-10;30!UBERON:0001008;7.19e-10;30!UBERON:0006555;6.84e-09;15!UBERON:0004819;6.84e-09;15!UBERON:0001285;6.84e-09;15!UBERON:0007684;6.84e-09;15!UBERON:0001225;9.15e-09;12!UBERON:0008987;9.15e-09;12!UBERON:0000305;9.40e-09;7!UBERON:0001851;1.05e-08;15!UBERON:0003124;2.76e-08;3!UBERON:0000920;2.76e-08;3!UBERON:0004211;4.05e-08;10!UBERON:0009773;4.05e-08;10!UBERON:0001231;4.05e-08;10!UBERON:0004810;4.05e-08;10!UBERON:0002113;1.03e-07;24!UBERON:0011143;1.03e-07;24!UBERON:0000489;2.60e-07;29!UBERON:0000353;8.83e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.44e-23,14;UBERON:0000158,1.44e-23,14;UBERON:0003124,4.02e-17,7;UBERON:0000478,1.41e-14,24;UBERON:0001008,8.45e-14,48;UBERON:0006554,1.08e-12,47;UBERON:0004871,1.14e-10,8;UBERON:0001987,2.16e-10,4;UBERON:0004340,2.16e-10,4;UBERON:0006555,2.44e-10,16;UBERON:0004819,2.44e-10,16;UBERON:0004211,7.15e-09,15;UBERON:0009773,7.15e-09,15;UBERON:0001231,7.15e-09,15;UBERON:0001285,7.15e-09,15;UBERON:0007684,7.15e-09,15;UBERON:0004208,7.15e-09,15;UBERON:0000305,7.36e-09,7;UBERON:0001225,1.08e-08,12;UBERON:0008987,1.08e-08,12;UBERON:0001851,1.16e-08,15;UBERON:0000920,2.00e-08,3;UBERON:0002113,2.12e-08,26;UBERON:0003918,2.12e-08,26;UBERON:0011143,2.12e-08,26;UBERON:0005095,2.12e-08,26;UBERON:0007687,2.12e-08,26;UBERON:0004810,5.76e-08,10;UBERON:0000489,6.05e-08,31;UBERON:0005103,5.45e-07,8;UBERON:0000083,5.45e-07,8;UBERON:0009201,5.45e-07,8;UBERON:0006553,5.45e-07,8;UBERON:0003074,5.45e-07,8;UBERON:0003060,5.45e-07,8;UBERON:0004876,6.27e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,3.27662058195258,2.11013582582763,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0.370784442784429,0,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0.825354125820202,0.835979866147242,1.29208379584664,1.06729878806013,1.67360306382335,2.01414658554573,0,2.19655851793353,1.47065232138347,2.43042584364528,1.07159673940896,0.898117490504679,0.337834441449967,1.53316637465883,0.949265659568129,1.28241220751285,0,0,0,0,0,0,0,0,0,1.06748995729705,1.97334038733728,0,1.21239604862719,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,1.34171076742555,1.72288698817931,1.97529702878181,1.7622379352613,1.00928340350251,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,1.2347220339942,1.47008711385542,0,0,0,0,1.22988438543114,0,0,0,0.201057944823262,0.277765335475589,0,0,0,0.115930404975077,0.117408694235822,1.01056513432752,0.462985512576611,0.380508304469197,3.95102198979638,5.15091697256924,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,1.17217447210047,1.71072446022705,0.411309970813294,0.300343057843917,0.857479297891735,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,1.58390374586686,2.1100756394171,0.871533458600294,2.49932477955143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,2.12189300012382,3.32870879020994,3.93107381328584,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0.40101294060657,0.276242966807689,0,0,0,1.35359883872224,0.924184045252977,0,2.92278449306521,0.949964660035881,2.27466768141793,1.87103075804167,0.647747748306418,0,1.08378575017541,2.00675909541941,2.03901018436031,3.3243040357149,0.223874754722178,0,0,0.769350375349168,0.984043937099117,0.650756789328606,0.206082023295445,0,0,0.574265537996172,0,1.6068392984416,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.765676274967505,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0.288666338176536,0,0,0.564862804660675,0.86101074534246,1.68471475667626,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,1.90995587790152,2.37571744666111,3.07160702099232,0,0,0,0,0.63337622438398,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.463840490809256,1.99613798001194,2.60427761085233,0.61221999997337,0,0,0,0.236387681767936,0,0,0.173624994933292,1.77148277162768,0.361789315876224,0,0,0.591095237907095,0.219385397153973,0,0.557694977114413,0.230850775511391,0,0.46112780877612,0.359030577639089,1.08647371922008,6.06102203490647,1.64875668123352,6.92945208824225,0,0,0,0,0,0,0,0,1.68798451622422,2.12202650606892,1.13082457147153,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0.234264445725339,0,0.391329237864179,0,0.789168805698781,1.20990716048664,0,0.189559738885464,0.150323419414493,0.207376382794494,0,0.330991955875499,0,0,0,0,2.60339607502696,0.391969589657511,0,1.57254001417827,0,0,0,0,0.581934098930517,0,0.677942222341597,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0.343609788497747,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0.599037001496973,0.429226048136571,0,0,0.360299883542404,0,0.157566364614447,0.0824158583811665,0,0,0,0,0.136203406111576,0.482259445395058,0.550157746388935,1.24632101408756,0,0,0.121499113316049,2.68347750079413,1.10327990218877,1.41627387964495,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,4.86867698375726,0,0.122026264901963,0.1251909307065,0.573409195690071,0.554645257684261,0.372578417648301,0,0.124980407962107,0,0,0.235265819698172,3.27834434064817,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0.63718706865481,1.34940933649081,0.310525913752519,0,0.53168342911599,0,2.10360652596106,2.66563648518157,0.406870733204662,0.545545977607678,1.50374779859484,2.32016879939247,0,0,0,0,0,0,1.50109113962448,0,0.453411851024545,0,0.244736704506468,0,5.24962460173653,0.219284049578707,0,0.578742114812744,0.337884881306145,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0.622077260032973,0,0,0.629063767423586,0,0,0,0.371807292777007,0,0,0,0,0,0,0.578063025868136,0,0.159633859057151,0,0.252071696221718,0.414943514785307,0.484426936895553,0,0,0.353909170043221,0,0.115525666150338,0,0.69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| ||
|short_description=p3@GPR143 | |||
}} | }} |
Latest revision as of 15:24, 16 September 2015
Short description: | p3@GPR143 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPR143_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000447366_5end |
EntrezGene: | GPR143 |
HGNC: | 20145 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.65e-16 | 19 |
epithelial cell | 2.10e-12 | 253 |
embryonic stem cell | 5.03e-11 | 5 |
epithelial cell of nephron | 7.15e-09 | 15 |
meso-epithelial cell | 7.33e-09 | 45 |
endothelial cell of vascular tree | 9.50e-09 | 24 |
kidney cortical cell | 1.08e-08 | 12 |
renal cortical epithelial cell | 1.08e-08 | 12 |
placental epithelial cell | 1.69e-08 | 3 |
chorionic membrane mesenchymal stem cell | 2.00e-08 | 3 |
lining cell | 4.20e-08 | 58 |
barrier cell | 4.20e-08 | 58 |
kidney tubule cell | 5.76e-08 | 10 |
nephron tubule epithelial cell | 5.76e-08 | 10 |
kidney cell | 1.19e-07 | 17 |
kidney epithelial cell | 1.19e-07 | 17 |
endothelial cell | 1.80e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.44e-23 | 14 |
membranous layer | 1.44e-23 | 14 |
chorion | 4.02e-17 | 7 |
extraembryonic structure | 1.41e-14 | 24 |
renal system | 8.45e-14 | 48 |
urinary system structure | 1.08e-12 | 47 |
somatic layer of lateral plate mesoderm | 1.14e-10 | 8 |
placenta | 2.16e-10 | 4 |
allantois | 2.16e-10 | 4 |
excretory tube | 2.44e-10 | 16 |
kidney epithelium | 2.44e-10 | 16 |
nephron epithelium | 7.15e-09 | 15 |
renal tubule | 7.15e-09 | 15 |
nephron tubule | 7.15e-09 | 15 |
nephron | 7.15e-09 | 15 |
uriniferous tubule | 7.15e-09 | 15 |
nephrogenic mesenchyme | 7.15e-09 | 15 |
amnion | 7.36e-09 | 7 |
cortex of kidney | 1.08e-08 | 12 |
renal parenchyma | 1.08e-08 | 12 |
cortex | 1.16e-08 | 15 |
egg chorion | 2.00e-08 | 3 |
kidney | 2.12e-08 | 26 |
kidney mesenchyme | 2.12e-08 | 26 |
upper urinary tract | 2.12e-08 | 26 |
kidney rudiment | 2.12e-08 | 26 |
kidney field | 2.12e-08 | 26 |
nephron tubule epithelium | 5.76e-08 | 10 |
cavitated compound organ | 6.05e-08 | 31 |
mesonephric epithelium | 5.45e-07 | 8 |
mesonephric tubule | 5.45e-07 | 8 |
nephric duct | 5.45e-07 | 8 |
renal duct | 5.45e-07 | 8 |
mesonephric duct | 5.45e-07 | 8 |
pronephric duct | 5.45e-07 | 8 |
urogenital ridge | 6.27e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 8.84e-08 | 25 |
female reproductive organ cancer | 6.79e-07 | 27 |