FFCP PHASE1:Mm9::chr10:41997406..41997420,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:41997406..41997420,- to FFCP PHASE1:Mm9::chr10:41997406..41997420,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=855 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:41997406..41997420,- | |||
|description=CAGE_peak_at_chr10:41997406..41997420,- | |||
|id=chr10:41997406..41997420,- | |||
|ontology_enrichment_celltype=CL:0000063!5.14e-08!66;CL:0002320!5.50e-07!46;CL:0000134!5.50e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,5.26e-12,20;CL:0002320,3.96e-11,46;CL:0000134,3.96e-11,46;CL:0000791,5.61e-11,9;CL:0000789,5.61e-11,9;CL:0002420,5.61e-11,9;CL:0002419,5.61e-11,9;CL:0000790,5.61e-11,9;CL:0002031,7.27e-11,25;CL:0000066,1.60e-10,25;CL:0000838,3.44e-10,12;CL:0000182,3.56e-10,5;CL:0000542,2.81e-09,13;CL:0000051,2.81e-09,13;CL:0000034,3.07e-09,97;CL:0000624,3.08e-09,8;CL:0000988,4.71e-09,32;CL:0002032,4.71e-09,32;CL:0000037,4.71e-09,32;CL:0000837,4.71e-09,32;CL:0000219,9.06e-09,54;CL:0000084,9.66e-09,11;CL:0000827,9.66e-09,11;CL:0002563,1.09e-07,9;CL:0002251,1.09e-07,9;CL:0000723,1.14e-07,91;CL:0000048,1.14e-07,91;CL:0002250,3.24e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,7.36e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.50e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.96e-11,46;UBERON:0003350,1.09e-07,9;UBERON:0004808,1.09e-07,9;UBERON:0001277,1.09e-07,9;UBERON:0000490,3.62e-07,66 | |||
|phase1_expression=0.480446541314382,1.39590163055744,0.909998478779072,2.41971369045464,2.50447864973174,0.671517087647559,0.233612640595526,25.3081713945489,1.267098499365,3.97909694747389,0.171217968225505,0.159544317990673,15.4080656938085,22.0299414095873,1.33243904726265,0.404950534779652,0.699561878128147,0.788655413395594,0.959801035240171,2.54633791078818,0.255129870453209,0.397163804803541,0,0,0.22940928106717,0,0,1.07735616342945,0,0,0.221730510655305,1.27006134691926,1.23012957516914,15.8481681015439,8.08784535303569,3.82339684324532,7.14592746918292,1.67412652294763,3.906676722619,0.523523743973798,7.64700934440319,5.46436387966757,2.91306211818692,0.629484089877886,0.811015449756117,0.734187008646726,0,0.65407546914134,0.439372365468944,0.972149495371417,0.419959264876088,0,2.18117387875057,7.25362142011344,5.71359458542189,0,0,1.54701627683233,0,0.528990979272033,0,0,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0,0.405017814995072,0,0,0,0.122490799214954,0,0,0,0.638436690425939,0.307213066512487,0,0.182975287204819,0,0.837548997004143,0,0.30559649555362,0,0.284743361598206,0,0.151452386666368,0.226714680320357,7.53647670624362,0.860423876981386,2.03991400112325,2.15881276655127,3.24888208723835,3.58421509677868,0.140444420131752,0.511290967734173,0.259786004602869,0.35333957451034,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0.173485326766136,0,0.461230994512117,0,0.587943535678524,0.125666591329675,0,0.144599356919912,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,0,1.46390398505774,1.04723353406728,0,0.718890747035522,1.19980546198682,0.635351135365324,0.449371918214468,0,0.125654352112864,0.347648640384553,0.511430914660661,0.20778804455956,0.648965052271031,0.203678727700633,0.248813941220186,0.252722758433675,0.841767423545896,0,0.689706313300419,0.180062129805349,0.30140963567143,0.136072998302656,0.384341160854549,0.281105173679186,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0.257347907114715,0.568326998791185,0.207125772535502,0,0.720248245844059,0.23674473558521,0,0,0,0.268273401399619,0.233530684734339,0.16455984991348,0.492502392237286,0.810688095458557,0.438599962275997,0.439100230582101,1.07365135008297,0.630869845692382,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0.407302655690628,0.581857461502877,0.350679099451593,0.316182685621286,0.442830443938806,0.470996183524124,0.740382983530803,0,0.333690211432188,0.589676985339609,0.224862112384854,0.202860121388503,0,0.50925170356284,0.575392274901621,0,0,0,0,0,0,0,0.482443521363367,0.554259570499814,0,0,0,0.469380496577004,0.335012514883631,0.476087281772027,0.975668239288994,0.157635144106191,0.44292937929755,0.318909537314974,0.81931657357869,0.345369963731791,0.723245292907558,0,0,0,0.275936746304732,0.642202359951168,0.586058432961016,0,0.252470927204373,0.631016438832513,0,0.646270193198397,0.716906393857656,0.445597348164788,0.566153061577665,0.809621403349789,0,0,0.321321316421807,0.851640511249612,0.178065603667255,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.517434735131018,0.214337035031592,0.886701168211368,0.178368817602071,0.329098041204242,1.522324745573,0.23467170806371,0,0.220528398054962,0.98931751764888,0.322928853391811,0.482503399425247,1.3130957840345,2.1338316966858,1.1659233465194,0.18542530201051,0.170870880797853,0.412773735926445,0.185194527369712,0.565105371014073,0.27338845544205,0.686334519619568,1.01987057996313,2.23922323717853,1.93479963326193,0,0.316335993581135,0.203319467126849,0.324016022465404,0,0.87345025498471,0.269728692769641,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.258319646955462,0.675824501963113,0.469428954583016,0.651021924219751,0.629156066554265,0.241584120826006,1.15212002503146,0,0.405450430580328,1.1298205288131,0,0.179026695667481,0.39736270956253,0.360586348559907,0.738447635872886,0.302899349844443,0.381034033274999,0.302478555410522,0.194915761479505,0.481059208201647,0.935015217452552,0.680191150845634,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.375364950902364,0.36630324853453,0.643105137237198,0.501572104035363,0,0.460325236507177,0,0.859265911718438,2.05524755931193,1.5107877947794,0.675022500231806,0,0.906284817968409,1.03552062350364,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0.476293691283074,0,0.38581844092741,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.423073039458382,0.182927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| |phase1_expression=0.480446541314382,1.39590163055744,0.909998478779072,2.41971369045464,2.50447864973174,0.671517087647559,0.233612640595526,25.3081713945489,1.267098499365,3.97909694747389,0.171217968225505,0.159544317990673,15.4080656938085,22.0299414095873,1.33243904726265,0.404950534779652,0.699561878128147,0.788655413395594,0.959801035240171,2.54633791078818,0.255129870453209,0.397163804803541,0,0,0.22940928106717,0,0,1.07735616342945,0,0,0.221730510655305,1.27006134691926,1.23012957516914,15.8481681015439,8.08784535303569,3.82339684324532,7.14592746918292,1.67412652294763,3.906676722619,0.523523743973798,7.64700934440319,5.46436387966757,2.91306211818692,0.629484089877886,0.811015449756117,0.734187008646726,0,0.65407546914134,0.439372365468944,0.972149495371417,0.419959264876088,0,2.18117387875057,7.25362142011344,5.71359458542189,0,0,1.54701627683233,0,0.528990979272033,0,0,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,0,0.405017814995072,0,0,0,0.122490799214954,0,0,0,0.638436690425939,0.307213066512487,0,0.182975287204819,0,0.837548997004143,0,0.30559649555362,0,0.284743361598206,0,0.151452386666368,0.226714680320357,7.53647670624362,0.860423876981386,2.03991400112325,2.15881276655127,3.24888208723835,3.58421509677868,0.140444420131752,0.511290967734173,0.259786004602869,0.35333957451034,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0.173485326766136,0,0.461230994512117,0,0.587943535678524,0.125666591329675,0,0.144599356919912,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,0,1.46390398505774,1.04723353406728,0,0.718890747035522,1.19980546198682,0.635351135365324,0.449371918214468,0,0.125654352112864,0.347648640384553,0.511430914660661,0.20778804455956,0.648965052271031,0.203678727700633,0.248813941220186,0.252722758433675,0.841767423545896,0,0.689706313300419,0.180062129805349,0.30140963567143,0.136072998302656,0.384341160854549,0.281105173679186,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0.199034266818493,0,0.257347907114715,0.568326998791185,0.207125772535502,0,0.720248245844059,0.23674473558521,0,0,0,0.268273401399619,0.233530684734339,0.16455984991348,0.492502392237286,0.810688095458557,0.438599962275997,0.439100230582101,1.07365135008297,0.630869845692382,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0.407302655690628,0.581857461502877,0.350679099451593,0.316182685621286,0.442830443938806,0.470996183524124,0.740382983530803,0,0.333690211432188,0.589676985339609,0.224862112384854,0.202860121388503,0,0.50925170356284,0.575392274901621,0,0,0,0,0,0,0,0.482443521363367,0.554259570499814,0,0,0,0.469380496577004,0.335012514883631,0.476087281772027,0.975668239288994,0.157635144106191,0.44292937929755,0.318909537314974,0.81931657357869,0.345369963731791,0.723245292907558,0,0,0,0.275936746304732,0.642202359951168,0.586058432961016,0,0.252470927204373,0.631016438832513,0,0.646270193198397,0.716906393857656,0.445597348164788,0.566153061577665,0.809621403349789,0,0,0.321321316421807,0.851640511249612,0.178065603667255,0.162886959353576,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.517434735131018,0.214337035031592,0.886701168211368,0.178368817602071,0.329098041204242,1.522324745573,0.23467170806371,0,0.220528398054962,0.98931751764888,0.322928853391811,0.482503399425247,1.3130957840345,2.1338316966858,1.1659233465194,0.18542530201051,0.170870880797853,0.412773735926445,0.185194527369712,0.565105371014073,0.27338845544205,0.686334519619568,1.01987057996313,2.23922323717853,1.93479963326193,0,0.316335993581135,0.203319467126849,0.324016022465404,0,0.87345025498471,0.269728692769641,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.258319646955462,0.675824501963113,0.469428954583016,0.651021924219751,0.629156066554265,0.241584120826006,1.15212002503146,0,0.405450430580328,1.1298205288131,0,0.179026695667481,0.39736270956253,0.360586348559907,0.738447635872886,0.302899349844443,0.381034033274999,0.302478555410522,0.194915761479505,0.481059208201647,0.935015217452552,0.680191150845634,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.375364950902364,0.36630324853453,0.643105137237198,0.501572104035363,0,0.460325236507177,0,0.859265911718438,2.05524755931193,1.5107877947794,0.675022500231806,0,0.906284817968409,1.03552062350364,0.103787347584177,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0.476293691283074,0,0.38581844092741,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0.423073039458382,0.182927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| ||
|short_description=p@chr10:41997406..41997420,- | |||
}} | }} |
Latest revision as of 09:22, 4 August 2015
Short description: | p@chr10:41997406..41997420, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:41997406..41997420, - |
Coexpression cluster: | MCL_coexpression_mm9:855 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 5.26e-12 | 20 |
connective tissue cell | 3.96e-11 | 46 |
mesenchymal cell | 3.96e-11 | 46 |
mature alpha-beta T cell | 5.61e-11 | 9 |
alpha-beta T cell | 5.61e-11 | 9 |
immature T cell | 5.61e-11 | 9 |
mature T cell | 5.61e-11 | 9 |
immature alpha-beta T cell | 5.61e-11 | 9 |
hematopoietic lineage restricted progenitor cell | 7.27e-11 | 25 |
epithelial cell | 1.60e-10 | 25 |
lymphoid lineage restricted progenitor cell | 3.44e-10 | 12 |
hepatocyte | 3.56e-10 | 5 |
lymphocyte | 2.81e-09 | 13 |
common lymphoid progenitor | 2.81e-09 | 13 |
stem cell | 3.07e-09 | 97 |
CD4-positive, alpha-beta T cell | 3.08e-09 | 8 |
hematopoietic cell | 4.71e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.71e-09 | 32 |
hematopoietic stem cell | 4.71e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.71e-09 | 32 |
motile cell | 9.06e-09 | 54 |
T cell | 9.66e-09 | 11 |
pro-T cell | 9.66e-09 | 11 |
intestinal epithelial cell | 1.09e-07 | 9 |
epithelial cell of alimentary canal | 1.09e-07 | 9 |
somatic stem cell | 1.14e-07 | 91 |
multi fate stem cell | 1.14e-07 | 91 |
intestinal crypt stem cell | 3.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.96e-11 | 46 |
epithelium of mucosa | 1.09e-07 | 9 |
gastrointestinal system epithelium | 1.09e-07 | 9 |
intestinal epithelium | 1.09e-07 | 9 |
unilaminar epithelium | 3.62e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 7.36e-08 | 6 |