FFCP PHASE1:Mm9::chr18:43552805..43552824,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr18:43552805..43552824,- to FFCP PHASE1:Mm9::chr18:43552805..43552824,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22240 | |EntrezGene=22240 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q62188 | |UniProt=Q62188 | ||
|association_with_transcript=160bp_to_NM_009468,uc008euh.2_5end | |||
|cluster_id=chr18:43552805..43552824,- | |||
|description=CAGE_peak_6_at_Dpysl3_5end | |||
|id=chr18:43552805..43552824,- | |||
|ontology_enrichment_celltype=CL:0000221!1.09e-20!44;CL:0000133!1.09e-20!44;CL:0002319!2.11e-20!43;CL:0000055!4.01e-19!50;CL:0000540!4.84e-19!33;CL:0000047!4.84e-19!33;CL:0000031!4.84e-19!33;CL:0000404!4.84e-19!33;CL:0000393!1.69e-18!39;CL:0000211!1.69e-18!39;CL:0000117!8.73e-14!23;CL:0000337!8.73e-14!23;CL:0002321!3.14e-10!70;CL:0000220!3.14e-10!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.81e-25,44;CL:0000133,4.81e-25,44;CL:0002319,1.14e-24,43;CL:0000540,3.80e-24,33;CL:0000047,3.80e-24,33;CL:0000031,3.80e-24,33;CL:0000404,3.80e-24,33;CL:0000393,1.22e-22,39;CL:0000211,1.22e-22,39;CL:0000117,2.39e-17,23;CL:0000337,2.39e-17,23;CL:0002321,1.29e-14,70;CL:0000107,1.73e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.23e-18!75;UBERON:0001016!1.23e-18!75;UBERON:0001017!2.48e-18!73;UBERON:0005743!2.48e-18!73;UBERON:0004121!5.27e-18!102;UBERON:0000924!5.27e-18!102;UBERON:0006601!5.27e-18!102;UBERON:0002346!1.75e-13!71;UBERON:0003075!1.75e-13!71;UBERON:0007284!1.75e-13!71;UBERON:0000033!1.30e-10!63;UBERON:0002020!4.25e-10!34;UBERON:0001049!9.28e-10!52;UBERON:0005068!9.28e-10!52;UBERON:0006241!9.28e-10!52;UBERON:0007135!9.28e-10!52;UBERON:0003056!1.04e-09!49;UBERON:0000468!6.05e-09!333;UBERON:0002616!1.06e-07!49;UBERON:0000955!1.26e-07!50;UBERON:0006238!1.26e-07!50;UBERON:0002791!3.35e-07!29;UBERON:0003528!3.35e-07!29;UBERON:0001893!3.35e-07!29;UBERON:0003080!5.11e-07!40;UBERON:0002780!7.20e-07!39;UBERON:0001890!7.20e-07!39;UBERON:0006240!7.20e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.21e-17,73;UBERON:0001016,7.29e-17,75;UBERON:0004121,2.31e-16,95;UBERON:0000924,2.31e-16,95;UBERON:0006601,2.31e-16,95;UBERON:0002346,1.66e-12,64;UBERON:0003075,1.66e-12,64;UBERON:0007284,1.66e-12,64;UBERON:0010371,2.18e-10,73;UBERON:0010314,8.43e-10,92;UBERON:0002020,7.03e-09,34;UBERON:0000073,9.79e-09,54;UBERON:0003056,7.88e-08,49;UBERON:0001049,1.09e-07,52;UBERON:0005068,1.09e-07,52;UBERON:0006241,1.09e-07,52;UBERON:0007135,1.09e-07,52;UBERON:0002410,1.73e-07,9 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0.319984845586813,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.629484089877886,0.304130793658544,1.83546752161682,1.56478268869608,2.39827672018491,0.439372365468944,1.1665793944457,2.37976916763116,7.18762821824858,0,0,0,1.54355661621568,1.71920063963254,1.03134418455488,28.3243045203437,23.2756030879694,35.494558596346,0.338844532069132,0,0,0,0,1.49800055259202,1.92109152660777,19.2862678893768,21.1959323180754,21.0324961351382,22.2807767834967,22.307722636113,24.6206506422058,29.0411777185256,25.7381260250806,1.10115880999389,1.65993539510744,1.84327839907492,29.8063010270238,32.386625835253,38.5475894212002,1.67509799400829,3.37657566019008,3.0559649555362,34.7661730858928,35.8776635613739,43.9902692147709,0.908714319998209,1.81371744256285,0.289864488701678,0,0,0,0,0,0,1.02258193546835,1.29893002301434,1.06001872353102,1.97180787687353,1.28326477414318,2.54805239706646,0,1.08245520505607,1.01343946190039,0.505524445014783,0.11418387971906,0,0.29688427812965,0.693941307064543,0.608930956624282,0.922461989024234,1.50722640552623,0.705532242814229,0.125666591329675,0,1.15679485535929,0,0.647067399789637,0,0.484875253135222,0,0,0.628340120440365,0,0,0,0,1.3481157546434,0.915001205637253,19.0994615211554,0.869121600961382,0.511430914660661,1.45451631191692,1.46017136760982,1.73126918545538,1.36847667671102,0.252722758433675,0.420883711772948,2.08192708740326,3.21862946206862,4.86167750474443,4.52114453507145,3.33378845841506,4.99643509110914,4.31027932974753,1.29351685369508,0.431135985865684,0.567318240503458,0.879755620819744,1.53437012699302,1.39023624612799,1.0447564995665,0.61734640922383,0.995171334092466,0,0,0,1.03562886267751,1.40715635988658,1.2604344302271,1.89395788468168,0.787056926989615,2.31400669331067,0.697601834251224,0.804820204198858,1.5179494507732,0.658239399653922,0.985004784474571,0.729619285912702,0.438599962275997,0.219550115291051,0.134206418760372,0.841159794256509,24.6971069710283,0.330418782983798,0,0.853153002140936,1.85789337488351,1.15980715189884,0.80673409849337,0.667134131534611,0.570676878337677,0,0.823494773620054,1.00534083520108,0.596869416123452,0.38992817423824,0,0.216138049874694,0.199141273254367,0.569003702859245,0.685491075658373,0,0.407302655690628,0.581857461502877,0.98190147846446,1.51767689098217,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0.488894929326078,0.509235257325564,0.704070744865506,0.167506257441816,0.238043640886014,0.390267295715598,0.945810864637146,0.664394068946325,1.11618338060241,0.491589944147214,0.863424909329478,0.433947175744535,0,0,0,0.275936746304732,1.28440471990234,1.40654023910644,0.163934945376675,0.252470927204373,7.88770548540642,8.98009111882268,8.61693590931196,3.34556317133573,3.11918143715352,4.81230102341015,8.50102473517278,5.26060544240361,7.51046778098395,0.642642632843614,0.851640511249612,1.06839362200353,0.977321756121456,1.48473110675282,1.32745138339963,0.728341908464944,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0.258428293168221,0,1.42598951353889,0.316036757935816,0,0,0,1.44048875225048,1.4229455216103,0.643011105094777,0.354680467284547,0.891844088010353,0.658196082408484,1.2178597964584,0.23467170806371,0.21183207086382,0.220528398054962,0.16488625294148,0.322928853391811,0.663442174209714,0.238744688006273,0.164140899745061,0,0.927126510052548,0,0.82554747185289,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,1.10717597753397,0.609958401380546,1.18805874903981,0.627264888043406,0.436725127492355,0.404593039154462,0.495920734352016,0,0.129614973291793,0.621339313086926,0,0.448549638131936,1.32366792365678,2.13896307178452,1.29159823477731,1.18269287843545,1.29092962510329,1.0416350787516,0.314578033277133,0.483168241652012,0,0.316011120628178,0.202725215290164,0.410843828659309,0.129920822977795,0.358053391334963,0,0.360586348559907,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.453460767230423,0,0,0,1.15913756419314,0.375364950902364,0.36630324853453,0,0,1.6942555278512,0.920650473014354,2.86447756719698,1.20297227640581,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0,3.84013186061454,8.77854721482268,4.26834014385335,2.91728060481953,3.98265008993166,4.41224420280034,2.44471400581777,3.29656091582231,3.20919209591815,3.03236654116557,2.5347929989024,4.52703219326583,3.27745276144588,4.03358460150676,3.21638626151434,4.76293691283074,3.70829843023538,2.50781986602817,4.12085900803307,2.35518272215036,3.08582327146874,2.30718548007139,2.86123427936785,3.19762116591123,2.4468438907986,3.55381353145041,2.56099162021882,2.10455769150274,2.44447404922551,1.12228454331548,1.66089025373844,4.23569274214923,3.27384834535751,3.40861050609125,1.35034627686799,6.24526444844865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| |phase1_expression=2.08193501236232,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0.319984845586813,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.629484089877886,0.304130793658544,1.83546752161682,1.56478268869608,2.39827672018491,0.439372365468944,1.1665793944457,2.37976916763116,7.18762821824858,0,0,0,1.54355661621568,1.71920063963254,1.03134418455488,28.3243045203437,23.2756030879694,35.494558596346,0.338844532069132,0,0,0,0,1.49800055259202,1.92109152660777,19.2862678893768,21.1959323180754,21.0324961351382,22.2807767834967,22.307722636113,24.6206506422058,29.0411777185256,25.7381260250806,1.10115880999389,1.65993539510744,1.84327839907492,29.8063010270238,32.386625835253,38.5475894212002,1.67509799400829,3.37657566019008,3.0559649555362,34.7661730858928,35.8776635613739,43.9902692147709,0.908714319998209,1.81371744256285,0.289864488701678,0,0,0,0,0,0,1.02258193546835,1.29893002301434,1.06001872353102,1.97180787687353,1.28326477414318,2.54805239706646,0,1.08245520505607,1.01343946190039,0.505524445014783,0.11418387971906,0,0.29688427812965,0.693941307064543,0.608930956624282,0.922461989024234,1.50722640552623,0.705532242814229,0.125666591329675,0,1.15679485535929,0,0.647067399789637,0,0.484875253135222,0,0,0.628340120440365,0,0,0,0,1.3481157546434,0.915001205637253,19.0994615211554,0.869121600961382,0.511430914660661,1.45451631191692,1.46017136760982,1.73126918545538,1.36847667671102,0.252722758433675,0.420883711772948,2.08192708740326,3.21862946206862,4.86167750474443,4.52114453507145,3.33378845841506,4.99643509110914,4.31027932974753,1.29351685369508,0.431135985865684,0.567318240503458,0.879755620819744,1.53437012699302,1.39023624612799,1.0447564995665,0.61734640922383,0.995171334092466,0,0,0,1.03562886267751,1.40715635988658,1.2604344302271,1.89395788468168,0.787056926989615,2.31400669331067,0.697601834251224,0.804820204198858,1.5179494507732,0.658239399653922,0.985004784474571,0.729619285912702,0.438599962275997,0.219550115291051,0.134206418760372,0.841159794256509,24.6971069710283,0.330418782983798,0,0.853153002140936,1.85789337488351,1.15980715189884,0.80673409849337,0.667134131534611,0.570676878337677,0,0.823494773620054,1.00534083520108,0.596869416123452,0.38992817423824,0,0.216138049874694,0.199141273254367,0.569003702859245,0.685491075658373,0,0.407302655690628,0.581857461502877,0.98190147846446,1.51767689098217,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0.488894929326078,0.509235257325564,0.704070744865506,0.167506257441816,0.238043640886014,0.390267295715598,0.945810864637146,0.664394068946325,1.11618338060241,0.491589944147214,0.863424909329478,0.433947175744535,0,0,0,0.275936746304732,1.28440471990234,1.40654023910644,0.163934945376675,0.252470927204373,7.88770548540642,8.98009111882268,8.61693590931196,3.34556317133573,3.11918143715352,4.81230102341015,8.50102473517278,5.26060544240361,7.51046778098395,0.642642632843614,0.851640511249612,1.06839362200353,0.977321756121456,1.48473110675282,1.32745138339963,0.728341908464944,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0.258428293168221,0,1.42598951353889,0.316036757935816,0,0,0,1.44048875225048,1.4229455216103,0.643011105094777,0.354680467284547,0.891844088010353,0.658196082408484,1.2178597964584,0.23467170806371,0.21183207086382,0.220528398054962,0.16488625294148,0.322928853391811,0.663442174209714,0.238744688006273,0.164140899745061,0,0.927126510052548,0,0.82554747185289,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,1.10717597753397,0.609958401380546,1.18805874903981,0.627264888043406,0.436725127492355,0.404593039154462,0.495920734352016,0,0.129614973291793,0.621339313086926,0,0.448549638131936,1.32366792365678,2.13896307178452,1.29159823477731,1.18269287843545,1.29092962510329,1.0416350787516,0.314578033277133,0.483168241652012,0,0.316011120628178,0.202725215290164,0.410843828659309,0.129920822977795,0.358053391334963,0,0.360586348559907,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.453460767230423,0,0,0,1.15913756419314,0.375364950902364,0.36630324853453,0,0,1.6942555278512,0.920650473014354,2.86447756719698,1.20297227640581,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,0.453142408984205,0,3.84013186061454,8.77854721482268,4.26834014385335,2.91728060481953,3.98265008993166,4.41224420280034,2.44471400581777,3.29656091582231,3.20919209591815,3.03236654116557,2.5347929989024,4.52703219326583,3.27745276144588,4.03358460150676,3.21638626151434,4.76293691283074,3.70829843023538,2.50781986602817,4.12085900803307,2.35518272215036,3.08582327146874,2.30718548007139,2.86123427936785,3.19762116591123,2.4468438907986,3.55381353145041,2.56099162021882,2.10455769150274,2.44447404922551,1.12228454331548,1.66089025373844,4.23569274214923,3.27384834535751,3.40861050609125,1.35034627686799,6.24526444844865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| ||
|short_description=p6@Dpysl3 | |||
}} | }} |
Latest revision as of 07:12, 27 September 2015
Short description: | p6@Dpysl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dpysl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 160bp_to_NM_009468, uc008euh.2_5end |
EntrezGene: | Dpysl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.81e-25 | 44 |
neurectodermal cell | 4.81e-25 | 44 |
neural cell | 1.14e-24 | 43 |
neuron | 3.80e-24 | 33 |
neuronal stem cell | 3.80e-24 | 33 |
neuroblast | 3.80e-24 | 33 |
electrically signaling cell | 3.80e-24 | 33 |
electrically responsive cell | 1.22e-22 | 39 |
electrically active cell | 1.22e-22 | 39 |
CNS neuron (sensu Vertebrata) | 2.39e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.39e-17 | 23 |
embryonic cell | 1.29e-14 | 70 |
autonomic neuron | 1.73e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.21e-17 | 73 |
nervous system | 7.29e-17 | 75 |
ectoderm-derived structure | 2.31e-16 | 95 |
ectoderm | 2.31e-16 | 95 |
presumptive ectoderm | 2.31e-16 | 95 |
neurectoderm | 1.66e-12 | 64 |
neural plate | 1.66e-12 | 64 |
presumptive neural plate | 1.66e-12 | 64 |
ecto-epithelium | 2.18e-10 | 73 |
structure with developmental contribution from neural crest | 8.43e-10 | 92 |
gray matter | 7.03e-09 | 34 |
regional part of nervous system | 9.79e-09 | 54 |
pre-chordal neural plate | 7.88e-08 | 49 |
neural tube | 1.09e-07 | 52 |
neural rod | 1.09e-07 | 52 |
future spinal cord | 1.09e-07 | 52 |
neural keel | 1.09e-07 | 52 |
autonomic nervous system | 1.73e-07 | 9 |