FFCP PHASE1:Mm9::chr1:137327067..137327082,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:137327067..137327082,- to FFCP PHASE1:Mm9::chr1:137327067..137327082,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=226432 | |EntrezGene=226432 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9QKZ2,E0CY46,Q91YE6 | |UniProt=E9QKZ2,E0CY46,Q91YE6 | ||
|association_with_transcript=0bp_to_ENSMUST00000041023,ENSMUST00000161189,NM_153774,uc007cte.1,uc007ctf.1_5end | |||
|cluster_id=chr1:137327067..137327082,- | |||
|description=CAGE_peak_2_at_Ipo9_5end | |||
|id=chr1:137327067..137327082,- | |||
|ontology_enrichment_celltype=CL:0000540!4.08e-11!33;CL:0000047!4.08e-11!33;CL:0000031!4.08e-11!33;CL:0000404!4.08e-11!33;CL:0000393!5.54e-11!39;CL:0000211!5.54e-11!39;CL:0002319!5.49e-10!43;CL:0000055!1.04e-09!50;CL:0000221!1.54e-09!44;CL:0000133!1.54e-09!44;CL:0000117!5.00e-09!23;CL:0000337!5.00e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.04e-11,33;CL:0000047,2.04e-11,33;CL:0000031,2.04e-11,33;CL:0000404,2.04e-11,33;CL:0000393,2.71e-11,39;CL:0000211,2.71e-11,39;CL:0002319,1.62e-10,43;CL:0000221,7.42e-10,44;CL:0000133,7.42e-10,44;CL:0000117,2.15e-09,23;CL:0000337,2.15e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.22e-10!75;UBERON:0001016!9.22e-10!75;UBERON:0001017!6.19e-09!73;UBERON:0005743!6.19e-09!73;UBERON:0004121!3.18e-07!102;UBERON:0000924!3.18e-07!102;UBERON:0006601!3.18e-07!102;UBERON:0002346!4.07e-07!71;UBERON:0003075!4.07e-07!71;UBERON:0007284!4.07e-07!71;UBERON:0002020!4.62e-07!34;UBERON:0001049!5.64e-07!52;UBERON:0005068!5.64e-07!52;UBERON:0006241!5.64e-07!52;UBERON:0007135!5.64e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.27e-10,75;UBERON:0001017,2.43e-09,73;UBERON:0002346,6.88e-08,64;UBERON:0003075,6.88e-08,64;UBERON:0007284,6.88e-08,64;UBERON:0004121,9.11e-08,95;UBERON:0000924,9.11e-08,95;UBERON:0006601,9.11e-08,95;UBERON:0000073,1.22e-07,54;UBERON:0001049,1.95e-07,52;UBERON:0005068,1.95e-07,52;UBERON:0006241,1.95e-07,52;UBERON:0007135,1.95e-07,52;UBERON:0002020,3.80e-07,34 | |||
|phase1_expression=1.44133962394315,0,0,0.30246421130683,0.500895729946347,1.00727563147134,0.467225281191051,1.67860320474049,1.267098499365,3.04283884218592,1.54096171402954,1.43589886191606,0.171200729931206,0.874204024189974,1.66554880907831,1.21485160433896,0,0.157731082679119,0.548457734422955,1.27316895539409,1.44573593256819,1.19149141441062,1.56719873483361,0.639969691173627,0,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,1.27006134691926,1.23012957516914,0,0.866554859253824,0.498703936075477,0,0,0,0,0,0,0,1.6366586336825,1.31790010585369,2.20256102594018,0,2.8343270329458,1.97717564461025,2.13872888981712,2.65974201088189,0,0.335565212115473,0.725362142011344,0.672187598284928,2.31533492432352,1.43266719969378,1.54701627683233,2.02316460859598,3.70293685490423,5.07065122804943,1.69422266034566,3.55717918444456,0.899899717281399,0,0.7104801149461,0.599200221036809,0.768436610643109,3.42175720617976,4.18518408828241,4.41682418837902,2.85650984403804,3.3130281142742,3.91970557487853,5.17565543498476,5.51531271966013,1.10115880999389,2.042997409363,2.30409799884365,2.37395317914349,3.11057988248193,3.12548022334056,3.62937898701795,0.56276261003168,1.83357897332172,3.83017161115768,3.84403538157578,3.16879057903011,4.16494063332512,3.09843396437821,1.44932244350839,0.860423876981386,0,0.539703191637817,0,0.448026887097336,0.561777680527007,2.72688516124892,2.07828803682295,2.47337702157238,0.845060518660083,2.56652954828636,17.8363667794652,7.11066703153331,0.865964164044856,1.26679932737549,1.51657333504435,0.91347103775248,0,0.29688427812965,4.51061849591953,0.913396434936424,0.922461989024234,1.80867168663147,1.17588707135705,1.63366568728578,0,1.3013942122792,2.65383165584962,0.970601099684455,1.10420759230197,1.45462575940567,0,1.17112318804619,1.8850203613211,0.255457055208591,0.359445373517761,0,0.254140454146129,2.54644086988199,1.83000241127451,1.50785222535437,1.56441888173049,3.58001640262463,1.87009240103604,2.10913641988085,1.42575109390443,0.995255764880744,0,0.631325567659422,2.60240885925407,2.98872735763515,1.80062129805349,2.71268672104287,1.15662048557257,1.15302348256365,1.96773621575431,1.03481348295606,4.31135985865684,4.34943984385984,4.92663147659057,0.876782929710299,0.834141747676794,1.39300866608867,1.23469281844766,2.58744546864041,0.702213187313235,0,0.568326998791185,4.34964122324554,1.64168241986767,1.98068267607116,2.3674473558521,1.96764231747404,1.3884040159864,0.697601834251224,0.536546802799238,0.700592054203017,1.31647879930784,0.985004784474571,0.810688095458557,0.584799949701329,0.439100230582101,0.671032093801859,0.841159794256509,2.16099685996497,0.330418782983798,0.528901133327089,3.19932375802851,2.32236671860439,1.28867461322093,1.81515172161008,0.22237804384487,0.760902504450237,1.42358718463353,1.15289268306808,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,1.70701110857774,2.74196430263349,1.1270773567308,2.8511185898344,2.71533482034676,1.61312385747733,0.822074982615345,1.03327103585722,1.41298855057237,1.1105744752962,0.889357881261447,2.16898637430922,1.57247196090562,2.24862112384854,1.62288097110802,1.68824011826692,0.763877555344259,0.575392274901621,0.162135226775035,0.549122826376163,0,1.11642284300551,0.624075346229121,1.76805214562978,1.25578189465339,0,0.923765950833023,3.41084541186873,2.93336957595647,2.71592137240301,1.40814148973101,1.34005005953453,0.952174563544055,0.195133647857799,1.41871629695572,1.7717175171902,1.43509291791738,1.3109065177259,0.863424909329478,1.15719246865209,0,0.54390568381871,1.47529281905711,0.275936746304732,2.0871576698413,1.28932855251423,2.62295912602681,0.252470927204373,2.83957397474631,0.780877488593277,2.80050417052639,2.62865677747807,2.45078541490634,4.81230102341015,2.83367491172426,2.04579100537918,3.16230222357219,0.642642632843614,0.709700426041343,1.6025904330053,1.14020871547503,1.15479086080775,3.98235415019888,1.94224508923985,1.51161778482376,0.377210159511796,1.18120757152309,0.922305443831782,1.03371317267288,1.45413491791002,3.56497378384721,1.58018378967908,0,0,1.02131881726136,3.78128297465751,1.55230420539305,1.50035924522115,2.48276327099183,1.60531935841864,1.64549020602121,0,2.3467170806371,1.69465656691056,0.441056796109924,0.8244312647074,0.645857706783622,1.74907482291652,1.19372344003136,1.64140899745061,0.582961673259701,1.48340241608408,1.53783792718067,0.82554747185289,1.48155621895769,0.941842285023455,0.820165366326151,1.83022538565218,0.339956859987711,0.559805809294632,0.276399947608848,0.954670618015114,4.58687190692646,2.23651413839534,1.62008011232702,1.46361807210128,1.52853794622324,0.809186078308924,0.661227645802687,1.57053565190418,0.129614973291793,0.621339313086926,1.12738587736838,2.69129782879162,2.64733584731356,2.91676782516071,2.32487682259916,1.68956125490778,1.5256441023948,1.5624526181274,2.72634295506848,2.65742532908607,0.864090018773596,0.632022241256357,2.8381530140623,2.15693010046137,1.81889152168913,1.07416017400489,0.79472541912506,1.08175904567972,1.32920574457119,1.51449674922221,0.990688486514998,1.41156659191577,1.65678397257579,1.15454209968395,0.935015217452552,0,2.21985953374065,4.03712354742641,4.36500002546604,0.579568782096571,0.563047426353546,0.183151624267265,0.214368379079066,1.00314420807073,0.564751842617067,1.38097570952153,2.29158205375759,1.3748254587495,2.05524755931193,3.7769694869485,2.70009000092722,1.80128481289688,0.453142408984205,1.55328093525546,4.77421798887213,5.58634822761443,3.92687293234509,2.67417388775123,2.51535795153579,2.38996560985018,2.66696073361938,2.06035057238894,0.320919209591815,2.52697211763797,0.25347929989024,2.07488975524684,2.24739617927718,2.04880487695582,1.78049953762401,4.28664322154766,0.927074607558844,2.31491064556446,1.64834360321323,2.50238164228475,2.74295401908332,1.24233064311536,0.953744759789284,1.88950341622027,1.03520318456864,2.36920902096694,1.28049581010941,1.57841826862706,1.7654534799962,3.92799590160417,1.42362021749009,2.06859412988683,3.27384834535751,1.39443157067369,0.771626443924566,2.74791635731741,2.10538447600868,0.859484216193193,0.956441660344217,0.441182838239031,1.62307484934295 | |phase1_expression=1.44133962394315,0,0,0.30246421130683,0.500895729946347,1.00727563147134,0.467225281191051,1.67860320474049,1.267098499365,3.04283884218592,1.54096171402954,1.43589886191606,0.171200729931206,0.874204024189974,1.66554880907831,1.21485160433896,0,0.157731082679119,0.548457734422955,1.27316895539409,1.44573593256819,1.19149141441062,1.56719873483361,0.639969691173627,0,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,1.27006134691926,1.23012957516914,0,0.866554859253824,0.498703936075477,0,0,0,0,0,0,0,1.6366586336825,1.31790010585369,2.20256102594018,0,2.8343270329458,1.97717564461025,2.13872888981712,2.65974201088189,0,0.335565212115473,0.725362142011344,0.672187598284928,2.31533492432352,1.43266719969378,1.54701627683233,2.02316460859598,3.70293685490423,5.07065122804943,1.69422266034566,3.55717918444456,0.899899717281399,0,0.7104801149461,0.599200221036809,0.768436610643109,3.42175720617976,4.18518408828241,4.41682418837902,2.85650984403804,3.3130281142742,3.91970557487853,5.17565543498476,5.51531271966013,1.10115880999389,2.042997409363,2.30409799884365,2.37395317914349,3.11057988248193,3.12548022334056,3.62937898701795,0.56276261003168,1.83357897332172,3.83017161115768,3.84403538157578,3.16879057903011,4.16494063332512,3.09843396437821,1.44932244350839,0.860423876981386,0,0.539703191637817,0,0.448026887097336,0.561777680527007,2.72688516124892,2.07828803682295,2.47337702157238,0.845060518660083,2.56652954828636,17.8363667794652,7.11066703153331,0.865964164044856,1.26679932737549,1.51657333504435,0.91347103775248,0,0.29688427812965,4.51061849591953,0.913396434936424,0.922461989024234,1.80867168663147,1.17588707135705,1.63366568728578,0,1.3013942122792,2.65383165584962,0.970601099684455,1.10420759230197,1.45462575940567,0,1.17112318804619,1.8850203613211,0.255457055208591,0.359445373517761,0,0.254140454146129,2.54644086988199,1.83000241127451,1.50785222535437,1.56441888173049,3.58001640262463,1.87009240103604,2.10913641988085,1.42575109390443,0.995255764880744,0,0.631325567659422,2.60240885925407,2.98872735763515,1.80062129805349,2.71268672104287,1.15662048557257,1.15302348256365,1.96773621575431,1.03481348295606,4.31135985865684,4.34943984385984,4.92663147659057,0.876782929710299,0.834141747676794,1.39300866608867,1.23469281844766,2.58744546864041,0.702213187313235,0,0.568326998791185,4.34964122324554,1.64168241986767,1.98068267607116,2.3674473558521,1.96764231747404,1.3884040159864,0.697601834251224,0.536546802799238,0.700592054203017,1.31647879930784,0.985004784474571,0.810688095458557,0.584799949701329,0.439100230582101,0.671032093801859,0.841159794256509,2.16099685996497,0.330418782983798,0.528901133327089,3.19932375802851,2.32236671860439,1.28867461322093,1.81515172161008,0.22237804384487,0.760902504450237,1.42358718463353,1.15289268306808,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,1.70701110857774,2.74196430263349,1.1270773567308,2.8511185898344,2.71533482034676,1.61312385747733,0.822074982615345,1.03327103585722,1.41298855057237,1.1105744752962,0.889357881261447,2.16898637430922,1.57247196090562,2.24862112384854,1.62288097110802,1.68824011826692,0.763877555344259,0.575392274901621,0.162135226775035,0.549122826376163,0,1.11642284300551,0.624075346229121,1.76805214562978,1.25578189465339,0,0.923765950833023,3.41084541186873,2.93336957595647,2.71592137240301,1.40814148973101,1.34005005953453,0.952174563544055,0.195133647857799,1.41871629695572,1.7717175171902,1.43509291791738,1.3109065177259,0.863424909329478,1.15719246865209,0,0.54390568381871,1.47529281905711,0.275936746304732,2.0871576698413,1.28932855251423,2.62295912602681,0.252470927204373,2.83957397474631,0.780877488593277,2.80050417052639,2.62865677747807,2.45078541490634,4.81230102341015,2.83367491172426,2.04579100537918,3.16230222357219,0.642642632843614,0.709700426041343,1.6025904330053,1.14020871547503,1.15479086080775,3.98235415019888,1.94224508923985,1.51161778482376,0.377210159511796,1.18120757152309,0.922305443831782,1.03371317267288,1.45413491791002,3.56497378384721,1.58018378967908,0,0,1.02131881726136,3.78128297465751,1.55230420539305,1.50035924522115,2.48276327099183,1.60531935841864,1.64549020602121,0,2.3467170806371,1.69465656691056,0.441056796109924,0.8244312647074,0.645857706783622,1.74907482291652,1.19372344003136,1.64140899745061,0.582961673259701,1.48340241608408,1.53783792718067,0.82554747185289,1.48155621895769,0.941842285023455,0.820165366326151,1.83022538565218,0.339956859987711,0.559805809294632,0.276399947608848,0.954670618015114,4.58687190692646,2.23651413839534,1.62008011232702,1.46361807210128,1.52853794622324,0.809186078308924,0.661227645802687,1.57053565190418,0.129614973291793,0.621339313086926,1.12738587736838,2.69129782879162,2.64733584731356,2.91676782516071,2.32487682259916,1.68956125490778,1.5256441023948,1.5624526181274,2.72634295506848,2.65742532908607,0.864090018773596,0.632022241256357,2.8381530140623,2.15693010046137,1.81889152168913,1.07416017400489,0.79472541912506,1.08175904567972,1.32920574457119,1.51449674922221,0.990688486514998,1.41156659191577,1.65678397257579,1.15454209968395,0.935015217452552,0,2.21985953374065,4.03712354742641,4.36500002546604,0.579568782096571,0.563047426353546,0.183151624267265,0.214368379079066,1.00314420807073,0.564751842617067,1.38097570952153,2.29158205375759,1.3748254587495,2.05524755931193,3.7769694869485,2.70009000092722,1.80128481289688,0.453142408984205,1.55328093525546,4.77421798887213,5.58634822761443,3.92687293234509,2.67417388775123,2.51535795153579,2.38996560985018,2.66696073361938,2.06035057238894,0.320919209591815,2.52697211763797,0.25347929989024,2.07488975524684,2.24739617927718,2.04880487695582,1.78049953762401,4.28664322154766,0.927074607558844,2.31491064556446,1.64834360321323,2.50238164228475,2.74295401908332,1.24233064311536,0.953744759789284,1.88950341622027,1.03520318456864,2.36920902096694,1.28049581010941,1.57841826862706,1.7654534799962,3.92799590160417,1.42362021749009,2.06859412988683,3.27384834535751,1.39443157067369,0.771626443924566,2.74791635731741,2.10538447600868,0.859484216193193,0.956441660344217,0.441182838239031,1.62307484934295 | ||
|short_description=p2@Ipo9 | |||
}} | }} |
Latest revision as of 10:44, 26 September 2015
Short description: | p2@Ipo9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ipo9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000041023, ENSMUST00000161189, NM_153774, uc007cte.1, uc007ctf.1_5end |
EntrezGene: | Ipo9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.04e-11 | 33 |
neuronal stem cell | 2.04e-11 | 33 |
neuroblast | 2.04e-11 | 33 |
electrically signaling cell | 2.04e-11 | 33 |
electrically responsive cell | 2.71e-11 | 39 |
electrically active cell | 2.71e-11 | 39 |
neural cell | 1.62e-10 | 43 |
ectodermal cell | 7.42e-10 | 44 |
neurectodermal cell | 7.42e-10 | 44 |
CNS neuron (sensu Vertebrata) | 2.15e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.15e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.27e-10 | 75 |
central nervous system | 2.43e-09 | 73 |
neurectoderm | 6.88e-08 | 64 |
neural plate | 6.88e-08 | 64 |
presumptive neural plate | 6.88e-08 | 64 |
ectoderm-derived structure | 9.11e-08 | 95 |
ectoderm | 9.11e-08 | 95 |
presumptive ectoderm | 9.11e-08 | 95 |
regional part of nervous system | 1.22e-07 | 54 |
neural tube | 1.95e-07 | 52 |
neural rod | 1.95e-07 | 52 |
future spinal cord | 1.95e-07 | 52 |
neural keel | 1.95e-07 | 52 |
gray matter | 3.80e-07 | 34 |