FF:10209-103G2: Difference between revisions

Latest revision as of 13:56, 3 June 2020

Name:	throat, adult
Species:	Human (Homo sapiens)
Library ID:	CNhs12858
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	NA
dev stage	NA
sex	28
age	M
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Biochain
collaboration	NA
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	R1234263-10
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005473

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12858		CAGE		DRX008743		DRR009615

Accession ID Hg19

Library id		BAM		CTSS
CNhs12858		DRZ001040		DRZ002425

Accession ID Hg38

Library id		BAM		CTSS
CNhs12858		DRZ012390		DRZ013775

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0605
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.0838
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.465
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0.0839
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0156
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0.215
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.268
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.0369
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0571
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.0839
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0839
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.164
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.0839
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.255
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.268
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0.465
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.0839
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0.358
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.301
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0.154
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	1.344
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0.00846
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.18
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.432
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.315
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.132
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.215
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.285
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.324
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0.154
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.268
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.0839
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0153
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.0839
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.0839
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0284
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.227
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.215
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.0839
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.268
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0.0839
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.0839
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.262
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.0839
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.0111
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0.747
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0.771
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0.0839
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0.0839
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0.0839
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.215
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.154
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0.771
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.0839
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0478
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0.358
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0.397
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0.432
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12858

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.211
MA0003.1	MA0003.1	0.0628
MA0004.1	MA0004.1	0.0218
MA0006.1	MA0006.1	0.1
MA0007.1	MA0007.1	0.334
MA0009.1	MA0009.1	0.879
MA0014.1	MA0014.1	0.953
MA0017.1	MA0017.1	0.162
MA0018.2	MA0018.2	0.0398
MA0019.1	MA0019.1	0.271
MA0024.1	MA0024.1	0.0623
MA0025.1	MA0025.1	0.933
MA0027.1	MA0027.1	0.837
MA0028.1	MA0028.1	3.38445e-6
MA0029.1	MA0029.1	0.639
MA0030.1	MA0030.1	0.055
MA0031.1	MA0031.1	0.442
MA0035.2	MA0035.2	0.277
MA0038.1	MA0038.1	0.0182
MA0039.2	MA0039.2	0.239
MA0040.1	MA0040.1	0.808
MA0041.1	MA0041.1	0.0979
MA0042.1	MA0042.1	0.187
MA0043.1	MA0043.1	0.0346
MA0046.1	MA0046.1	0.0491
MA0047.2	MA0047.2	0.0535
MA0048.1	MA0048.1	0.00152
MA0050.1	MA0050.1	0.0398
MA0051.1	MA0051.1	0.145
MA0052.1	MA0052.1	2.02471e-27
MA0055.1	MA0055.1	8.25402e-4
MA0057.1	MA0057.1	0.304
MA0058.1	MA0058.1	0.0028
MA0059.1	MA0059.1	0.00325
MA0060.1	MA0060.1	0.00607
MA0061.1	MA0061.1	3.72417e-4
MA0062.2	MA0062.2	1.94914e-9
MA0065.2	MA0065.2	0.367
MA0066.1	MA0066.1	0.807
MA0067.1	MA0067.1	0.0541
MA0068.1	MA0068.1	0.0637
MA0069.1	MA0069.1	0.447
MA0070.1	MA0070.1	0.503
MA0071.1	MA0071.1	0.777
MA0072.1	MA0072.1	0.0856
MA0073.1	MA0073.1	0.876
MA0074.1	MA0074.1	0.926
MA0076.1	MA0076.1	3.18044e-6
MA0077.1	MA0077.1	0.61
MA0078.1	MA0078.1	0.27
MA0079.2	MA0079.2	0.127
MA0080.2	MA0080.2	0.0309
MA0081.1	MA0081.1	0.0176
MA0083.1	MA0083.1	0.0318
MA0084.1	MA0084.1	0.679
MA0087.1	MA0087.1	0.284
MA0088.1	MA0088.1	0.125
MA0090.1	MA0090.1	0.42
MA0091.1	MA0091.1	0.259
MA0092.1	MA0092.1	0.237
MA0093.1	MA0093.1	0.0146
MA0099.2	MA0099.2	2.45928e-15
MA0100.1	MA0100.1	0.0914
MA0101.1	MA0101.1	4.60738e-4
MA0102.2	MA0102.2	0.0751
MA0103.1	MA0103.1	0.00161
MA0104.2	MA0104.2	9.43357e-4
MA0105.1	MA0105.1	0.00113
MA0106.1	MA0106.1	0.507
MA0107.1	MA0107.1	2.50818e-4
MA0108.2	MA0108.2	8.5835e-26
MA0111.1	MA0111.1	0.487
MA0112.2	MA0112.2	0.00594
MA0113.1	MA0113.1	0.0308
MA0114.1	MA0114.1	0.74
MA0115.1	MA0115.1	0.211
MA0116.1	MA0116.1	0.192
MA0117.1	MA0117.1	0.257
MA0119.1	MA0119.1	0.797
MA0122.1	MA0122.1	0.0656
MA0124.1	MA0124.1	0.915
MA0125.1	MA0125.1	0.667
MA0131.1	MA0131.1	0.0219
MA0135.1	MA0135.1	0.345
MA0136.1	MA0136.1	0.00395
MA0137.2	MA0137.2	0.406
MA0138.2	MA0138.2	0.148
MA0139.1	MA0139.1	0.538
MA0140.1	MA0140.1	0.31
MA0141.1	MA0141.1	0.284
MA0142.1	MA0142.1	0.07
MA0143.1	MA0143.1	0.151
MA0144.1	MA0144.1	0.936
MA0145.1	MA0145.1	0.0124
MA0146.1	MA0146.1	0.48
MA0147.1	MA0147.1	9.27456e-4
MA0148.1	MA0148.1	0.106
MA0149.1	MA0149.1	0.11
MA0150.1	MA0150.1	6.72225e-4
MA0152.1	MA0152.1	0.883
MA0153.1	MA0153.1	0.673
MA0154.1	MA0154.1	0.693
MA0155.1	MA0155.1	0.093
MA0156.1	MA0156.1	2.40547e-5
MA0157.1	MA0157.1	0.798
MA0159.1	MA0159.1	0.314
MA0160.1	MA0160.1	0.446
MA0162.1	MA0162.1	0.105
MA0163.1	MA0163.1	0.0289
MA0164.1	MA0164.1	0.709
MA0258.1	MA0258.1	0.0894
MA0259.1	MA0259.1	0.0152

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12858

Novel motif	Logo	P-value
1	1	0.811
10	10	0.106
100	100	0.329
101	101	0.111
102	102	0.833
103	103	0.4
104	104	0.713
105	105	0.718
106	106	0.423
107	107	0.0831
108	108	0.218
109	109	0.828
11	11	0.84
110	110	0.689
111	111	0.46
112	112	0.0793
113	113	0.898
114	114	0.171
115	115	0.0627
116	116	0.468
117	117	0.192
118	118	0.0296
119	119	0.282
12	12	0.774
120	120	0.716
121	121	0.518
122	122	0.391
123	123	0.019
124	124	0.323
125	125	0.828
126	126	0.138
127	127	0.758
128	128	0.189
129	129	0.368
13	13	0.375
130	130	0.745
131	131	0.408
132	132	0.043
133	133	1.0711e-4
134	134	0.0048
135	135	0.0636
136	136	0.654
137	137	0.326
138	138	0.512
139	139	0.419
14	14	0.505
140	140	0.888
141	141	0.964
142	142	0.567
143	143	0.00506
144	144	0.671
145	145	0.952
146	146	0.686
147	147	0.0203
148	148	0.906
149	149	0.0124
15	15	0.368
150	150	0.884
151	151	0.406
152	152	0.102
153	153	0.485
154	154	0.64
155	155	0.611
156	156	0.111
157	157	0.907
158	158	0.0762
159	159	0.841
16	16	0.346
160	160	0.705
161	161	0.692
162	162	0.503
163	163	0.106
164	164	0.197
165	165	0.0359
166	166	0.0884
167	167	0.0614
168	168	0.144
169	169	0.0481
17	17	0.879
18	18	0.0812
19	19	0.126
2	2	0.00823
20	20	0.0546
21	21	0.643
22	22	0.139
23	23	0.331
24	24	0.567
25	25	0.835
26	26	0.536
27	27	0.398
28	28	0.974
29	29	0.184
3	3	0.78
30	30	0.00751
31	31	0.766
32	32	0.226
33	33	0.506
34	34	0.278
35	35	0.597
36	36	0.0126
37	37	0.941
38	38	0.779
39	39	0.199
4	4	0.655
40	40	0.234
41	41	0.481
42	42	0.461
43	43	0.672
44	44	0.0312
45	45	0.027
46	46	0.84
47	47	0.571
48	48	0.579
49	49	0.435
5	5	0.644
50	50	0.387
51	51	0.703
52	52	0.069
53	53	0.683
54	54	0.924
55	55	0.978
56	56	0.889
57	57	0.383
58	58	0.966
59	59	0.16
6	6	0.728
60	60	0.211
61	61	0.612
62	62	0.805
63	63	0.324
64	64	0.827
65	65	0.479
66	66	0.00837
67	67	0.241
68	68	0.23
69	69	0.379
7	7	0.682
70	70	0.665
71	71	0.363
72	72	0.637
73	73	0.573
74	74	0.126
75	75	0.301
76	76	0.0105
77	77	0.0105
78	78	0.906
79	79	0.472
8	8	0.931
80	80	0.638
81	81	0.696
82	82	0.417
83	83	0.719
84	84	0.906
85	85	0.112
86	86	0.714
87	87	0.847
88	88	0.63
89	89	0.0956
9	9	0.459
90	90	0.0659
91	91	0.0976
92	92	0.407
93	93	0.95
94	94	0.0791
95	95	0.395
96	96	0.64
97	97	0.813
98	98	0.999
99	99	0.112

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12858

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010209 human throat - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000341 (throat)
0000974 (neck)
0000479 (tissue)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
0000153 (anterior region of body)
0007811 (craniocervical region)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010209 (human throat - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 1: / Line 1: @@
 {{f5samples
-|id=FF:10209-103G2
+|DRA_sample_Accession=CAGE@SAMD00005473
-|name=throat, adult
+|accession_numbers=CAGE;DRX008743;DRR009615;DRZ001040;DRZ002425;DRZ012390;DRZ013775
-|sample_id=10209
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000341,UBERON:0000974,UBERON:0000479,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0001062,UBERON:0000153,UBERON:0007811
-|rna_tube_id=103G2
-|rna_box=103
-|rna_position=G2
-|sample_cell_lot=NA
-|sample_cell_catalog=NA
-|sample_company=Biochain
-|rna_lot_number=
-|rna_catalog_number=R1234263-10
-|sample_species=Human (Homo sapiens)
-|sample_strain=
-|sample_dev_stage=
-|sample_tissue=
-|sample_donor(cell lot)=
-|sample_sex=28
-|sample_age=M
-|sample_ethnicity=
-|rna_rin=
-|rna_od260/230=
-|rna_od260/280=
-|sample_cell_type=CELL MIXTURE - tissue sample
-|sample_cell_line=
-|sample_collaboration=
-|sample_experimental_condition=
-|sample_disease=
-|rna_sample_type=
-|rna_extraction_protocol=
-|rna_weight_ug=10
-|rna_concentration=1.75
-|sample_note=
-|profile_hcage=CNhs12858,LSID973,release012,COMPLETED
-|profile_cagescan=,,,
-|profile_srnaseq=,,,
-|profile_rnaseq=,,,
 |ancestors_in_cell_lineage_facet=
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000341,UBERON:0000465,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0001062,UBERON:0007023
 |ancestors_in_disease_facet=
-|sample_description=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010209
+|comment=
+|created_by=
+|creation_date=
+|data_phase=2
+|datafreeze_phase=2
+|def=
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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000341
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 66: / Line 40: @@
 |fonse_treatment=
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+|rna_weight_ug=10
+|sample_age=M
+|sample_category=tissues
+|sample_cell_catalog=NA
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+|sample_cell_type=CELL MIXTURE - tissue sample
+|sample_collaboration=
+|sample_company=Biochain
+|sample_description=
+|sample_dev_stage=
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+|sample_donor(cell lot)=
+|sample_ethnicity=
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+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.0282704224133e-215!GO:0005737;cytoplasm;6.4332159241492e-210!GO:0043226;organelle;1.01276484861107e-130!GO:0043229;intracellular organelle;2.29723928545291e-130!GO:0044444;cytoplasmic part;3.0248239316344e-130!GO:0043227;membrane-bound organelle;5.73264038145822e-103!GO:0043231;intracellular membrane-bound organelle;6.4267005230773e-103!GO:0005515;protein binding;2.35318231075997e-99!GO:0044422;organelle part;5.19358530812101e-92!GO:0044446;intracellular organelle part;1.27318588604863e-90!GO:0032991;macromolecular complex;3.9074286331632e-73!GO:0005739;mitochondrion;2.64702069217275e-53!GO:0030529;ribonucleoprotein complex;2.03297530646621e-51!GO:0044237;cellular metabolic process;1.8972325349533e-45!GO:0043233;organelle lumen;1.16951320817316e-42!GO:0031974;membrane-enclosed lumen;1.16951320817316e-42!GO:0019538;protein metabolic process;2.68787563032302e-42!GO:0044238;primary metabolic process;5.28772789502377e-42!GO:0003723;RNA binding;5.57634570109863e-42!GO:0043234;protein complex;8.92453314483591e-41!GO:0016043;cellular component organization and biogenesis;1.80407254510954e-40!GO:0044429;mitochondrial part;1.14526523443967e-38!GO:0043170;macromolecule metabolic process;1.14526523443967e-38!GO:0044260;cellular macromolecule metabolic process;5.43116758131458e-38!GO:0043228;non-membrane-bound organelle;1.39397126834433e-36!GO:0043232;intracellular non-membrane-bound organelle;1.39397126834433e-36!GO:0044267;cellular protein metabolic process;4.4226895500564e-36!GO:0031090;organelle membrane;7.9021805143337e-36!GO:0005829;cytosol;1.28236464325086e-35!GO:0044428;nuclear part;3.72787518699315e-35!GO:0005840;ribosome;1.34249227436378e-34!GO:0006412;translation;2.27896334451215e-34!GO:0031967;organelle envelope;2.80613086414657e-34!GO:0031975;envelope;4.38600974331264e-34!GO:0033036;macromolecule localization;3.75800890134483e-31!GO:0003735;structural constituent of ribosome;1.03574349609018e-30!GO:0015031;protein transport;4.71733969360275e-29!GO:0008104;protein localization;6.54648220648459e-29!GO:0045184;establishment of protein localization;2.51549723376519e-28!GO:0009058;biosynthetic process;3.32281634778304e-27!GO:0005634;nucleus;3.32281634778304e-27!GO:0009059;macromolecule biosynthetic process;4.16653647747978e-27!GO:0044249;cellular biosynthetic process;4.97466780540468e-27!GO:0005740;mitochondrial envelope;1.23139913848395e-26!GO:0033279;ribosomal subunit;1.50345514287999e-26!GO:0031966;mitochondrial membrane;3.78607633558583e-26!GO:0008092;cytoskeletal protein binding;1.45342434349979e-25!GO:0019866;organelle inner membrane;4.55842739945739e-25!GO:0046907;intracellular transport;8.73474426592062e-25!GO:0005743;mitochondrial inner membrane;3.35883684598789e-24!GO:0016071;mRNA metabolic process;3.72997394689132e-24!GO:0065003;macromolecular complex assembly;1.16645814076148e-23!GO:0022607;cellular component assembly;3.48464894974747e-23!GO:0008380;RNA splicing;4.05015478703133e-23!GO:0006396;RNA processing;4.57602814754638e-22!GO:0031981;nuclear lumen;9.35136152176427e-22!GO:0006886;intracellular protein transport;3.59062608179522e-21!GO:0006119;oxidative phosphorylation;4.97771727414399e-21!GO:0006996;organelle organization and biogenesis;1.36434022843407e-20!GO:0006397;mRNA processing;6.43208034704842e-20!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.11330675573847e-19!GO:0044445;cytosolic part;1.27832506498663e-18!GO:0044455;mitochondrial membrane part;2.91069590679616e-18!GO:0005746;mitochondrial respiratory chain;3.45616257081435e-18!GO:0048770;pigment granule;5.72850125624851e-18!GO:0042470;melanosome;5.72850125624851e-18!GO:0008134;transcription factor binding;1.14104201062686e-16!GO:0003779;actin binding;1.78404376584899e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.42363811873194e-16!GO:0031980;mitochondrial lumen;2.42363811873194e-16!GO:0005759;mitochondrial matrix;2.42363811873194e-16!GO:0051641;cellular localization;4.27392254596627e-16!GO:0050136;NADH dehydrogenase (quinone) activity;4.27392254596627e-16!GO:0003954;NADH dehydrogenase activity;4.27392254596627e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.27392254596627e-16!GO:0051649;establishment of cellular localization;6.41903211672129e-16!GO:0015629;actin cytoskeleton;6.77540508562191e-16!GO:0043283;biopolymer metabolic process;7.88549671633054e-16!GO:0005783;endoplasmic reticulum;8.73870248373501e-16!GO:0005681;spliceosome;1.93552809287877e-15!GO:0000166;nucleotide binding;2.99623788646725e-15!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.61486530895182e-15!GO:0015935;small ribosomal subunit;1.18195179000757e-14!GO:0044265;cellular macromolecule catabolic process;1.85372529942886e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.54668228811369e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;4.61091161127948e-14!GO:0005654;nucleoplasm;4.89662888275489e-14!GO:0016192;vesicle-mediated transport;5.54281415113636e-14!GO:0030964;NADH dehydrogenase complex (quinone);7.83201490577777e-14!GO:0045271;respiratory chain complex I;7.83201490577777e-14!GO:0005747;mitochondrial respiratory chain complex I;7.83201490577777e-14!GO:0006511;ubiquitin-dependent protein catabolic process;8.1779520302254e-14!GO:0019941;modification-dependent protein catabolic process;9.00512386101193e-14!GO:0043632;modification-dependent macromolecule catabolic process;9.00512386101193e-14!GO:0010467;gene expression;1.16399538231329e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.4460539018134e-13!GO:0042773;ATP synthesis coupled electron transport;1.4460539018134e-13!GO:0044257;cellular protein catabolic process;1.52682787029197e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.3927185437909e-13!GO:0022618;protein-RNA complex assembly;2.78110058282323e-13!GO:0005856;cytoskeleton;3.40863713920408e-13!GO:0044248;cellular catabolic process;4.83189679291462e-13!GO:0030036;actin cytoskeleton organization and biogenesis;5.27120496714539e-13!GO:0015934;large ribosomal subunit;5.27120496714539e-13!GO:0044449;contractile fiber part;6.50058552995306e-13!GO:0005794;Golgi apparatus;1.39247115810557e-12!GO:0006512;ubiquitin cycle;1.57864080791176e-12!GO:0008135;translation factor activity, nucleic acid binding;1.58669342452269e-12!GO:0051186;cofactor metabolic process;2.16492435218364e-12!GO:0030029;actin filament-based process;2.38824432637696e-12!GO:0006605;protein targeting;2.44889844320388e-12!GO:0048523;negative regulation of cellular process;2.60023122670993e-12!GO:0043292;contractile fiber;3.47241693002934e-12!GO:0006457;protein folding;3.98633519379388e-12!GO:0012505;endomembrane system;4.23771335963127e-12!GO:0043412;biopolymer modification;7.54965051950918e-12!GO:0044451;nucleoplasm part;1.09308905375568e-11!GO:0009057;macromolecule catabolic process;1.20660037583735e-11!GO:0043285;biopolymer catabolic process;1.38018179033286e-11!GO:0008307;structural constituent of muscle;1.38988953891637e-11!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.42821327868363e-11!GO:0016817;hydrolase activity, acting on acid anhydrides;1.70954705327267e-11!GO:0030163;protein catabolic process;1.81672762466733e-11!GO:0016462;pyrophosphatase activity;1.83563802853738e-11!GO:0017111;nucleoside-triphosphatase activity;2.39872993240126e-11!GO:0043687;post-translational protein modification;2.60772139038923e-11!GO:0006464;protein modification process;3.51673537039583e-11!GO:0000502;proteasome complex (sensu Eukaryota);3.98253630265739e-11!GO:0016874;ligase activity;4.35292501383097e-11!GO:0048519;negative regulation of biological process;5.46250858176032e-11!GO:0048193;Golgi vesicle transport;5.62146165611466e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.52902180338167e-11!GO:0030016;myofibril;7.89697979084524e-11!GO:0012501;programmed cell death;8.41274233651818e-11!GO:0017076;purine nucleotide binding;9.8105098826713e-11!GO:0006915;apoptosis;1.12662927624862e-10!GO:0005761;mitochondrial ribosome;1.45343079834962e-10!GO:0000313;organellar ribosome;1.45343079834962e-10!GO:0003712;transcription cofactor activity;1.52324027112082e-10!GO:0006461;protein complex assembly;2.64389225788763e-10!GO:0006366;transcription from RNA polymerase II promoter;4.07804542520802e-10!GO:0009055;electron carrier activity;4.1792055311309e-10!GO:0032553;ribonucleotide binding;4.48477000783637e-10!GO:0032555;purine ribonucleotide binding;4.48477000783637e-10!GO:0030017;sarcomere;7.64615411138324e-10!GO:0008219;cell death;7.96398332038523e-10!GO:0016265;death;7.96398332038523e-10!GO:0006446;regulation of translational initiation;1.27678123467775e-09!GO:0015980;energy derivation by oxidation of organic compounds;1.31832176724055e-09!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.72845785152851e-09!GO:0006091;generation of precursor metabolites and energy;1.93327411240857e-09!GO:0045333;cellular respiration;2.14676305964989e-09!GO:0006732;coenzyme metabolic process;2.36184388847315e-09!GO:0007010;cytoskeleton organization and biogenesis;2.77720752121534e-09!GO:0044432;endoplasmic reticulum part;3.2608559633325e-09!GO:0003743;translation initiation factor activity;3.51410813215837e-09!GO:0006913;nucleocytoplasmic transport;4.13219248725647e-09!GO:0006413;translational initiation;5.68678125161962e-09!GO:0009060;aerobic respiration;6.11089385284869e-09!GO:0008565;protein transporter activity;6.9427629637388e-09!GO:0016604;nuclear body;7.5218299709684e-09!GO:0051082;unfolded protein binding;8.1017851029956e-09!GO:0051246;regulation of protein metabolic process;8.89456916489175e-09!GO:0016564;transcription repressor activity;8.9776283677016e-09!GO:0051169;nuclear transport;9.3142807886088e-09!GO:0019829;cation-transporting ATPase activity;1.27183008253806e-08!GO:0009056;catabolic process;1.77179135917201e-08!GO:0005635;nuclear envelope;2.10330831853297e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.33440902457413e-08!GO:0005730;nucleolus;2.75624764155594e-08!GO:0006793;phosphorus metabolic process;2.95715383988252e-08!GO:0006796;phosphate metabolic process;2.95715383988252e-08!GO:0031982;vesicle;3.46442607373673e-08!GO:0016607;nuclear speck;3.9627669929935e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.93913214683829e-08!GO:0031988;membrane-bound vesicle;5.44398283969089e-08!GO:0030554;adenyl nucleotide binding;6.47603344906662e-08!GO:0008639;small protein conjugating enzyme activity;6.49015914413357e-08!GO:0031965;nuclear membrane;6.51664270643258e-08!GO:0005793;ER-Golgi intermediate compartment;6.52124618470024e-08!GO:0006099;tricarboxylic acid cycle;6.71759774557957e-08!GO:0046356;acetyl-CoA catabolic process;6.71759774557957e-08!GO:0004842;ubiquitin-protein ligase activity;8.85837187980459e-08!GO:0017038;protein import;8.90010993278671e-08!GO:0031410;cytoplasmic vesicle;9.13532196928381e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.61334214595897e-08!GO:0005768;endosome;1.01559020131649e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.3064915236671e-07!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.3095575895774e-07!GO:0006084;acetyl-CoA metabolic process;1.72853654968128e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;1.88168180214731e-07!GO:0000375;RNA splicing, via transesterification reactions;1.88168180214731e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.88168180214731e-07!GO:0032559;adenyl ribonucleotide binding;2.27014428064725e-07!GO:0007517;muscle development;2.32051563998771e-07!GO:0042802;identical protein binding;2.56278773680338e-07!GO:0019899;enzyme binding;2.57861740035284e-07!GO:0005524;ATP binding;2.94910119228647e-07!GO:0019787;small conjugating protein ligase activity;3.1549735700064e-07!GO:0009109;coenzyme catabolic process;3.30643920095469e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.71063093762637e-07!GO:0051187;cofactor catabolic process;5.68513633204543e-07!GO:0016529;sarcoplasmic reticulum;5.98030895344574e-07!GO:0016528;sarcoplasm;5.98030895344574e-07!GO:0015986;ATP synthesis coupled proton transport;7.42671793682817e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.42671793682817e-07!GO:0016310;phosphorylation;8.03727794997309e-07!GO:0006163;purine nucleotide metabolic process;8.6951672103043e-07!GO:0009150;purine ribonucleotide metabolic process;9.31904105648528e-07!GO:0031252;leading edge;1.01856058046239e-06!GO:0031674;I band;1.22342529722375e-06!GO:0006259;DNA metabolic process;1.32980388772321e-06!GO:0003714;transcription corepressor activity;1.40673803390413e-06!GO:0009892;negative regulation of metabolic process;1.48628705977841e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.57952876787375e-06!GO:0006606;protein import into nucleus;1.57968004051523e-06!GO:0042981;regulation of apoptosis;1.81877031611641e-06!GO:0045259;proton-transporting ATP synthase complex;1.98108060167322e-06!GO:0051170;nuclear import;2.29892840409807e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.29892840409807e-06!GO:0030120;vesicle coat;2.52703767783754e-06!GO:0030662;coated vesicle membrane;2.52703767783754e-06!GO:0016491;oxidoreductase activity;2.68699148753581e-06!GO:0009259;ribonucleotide metabolic process;2.88483793967762e-06!GO:0003924;GTPase activity;3.08129085158086e-06!GO:0051789;response to protein stimulus;3.15511137634451e-06!GO:0006986;response to unfolded protein;3.15511137634451e-06!GO:0016881;acid-amino acid ligase activity;3.38371268279515e-06!GO:0006916;anti-apoptosis;3.50616254463013e-06!GO:0043067;regulation of programmed cell death;3.57481065334618e-06!GO:0016887;ATPase activity;4.21303553446374e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.52078673348683e-06!GO:0016481;negative regulation of transcription;4.79476866350627e-06!GO:0031324;negative regulation of cellular metabolic process;5.47547107361908e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.60736270157123e-06!GO:0009144;purine nucleoside triphosphate metabolic process;5.60736270157123e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.62735922105831e-06!GO:0005789;endoplasmic reticulum membrane;5.78301610622217e-06!GO:0051128;regulation of cellular component organization and biogenesis;5.79772933933919e-06!GO:0009199;ribonucleoside triphosphate metabolic process;6.36876287126488e-06!GO:0016044;membrane organization and biogenesis;6.46025202652167e-06!GO:0009141;nucleoside triphosphate metabolic process;6.62499198342175e-06!GO:0046034;ATP metabolic process;7.89266856061493e-06!GO:0006164;purine nucleotide biosynthetic process;8.37929505559616e-06!GO:0006950;response to stress;8.75275782835969e-06!GO:0043069;negative regulation of programmed cell death;8.90219449934193e-06!GO:0009152;purine ribonucleotide biosynthetic process;9.18274678274797e-06!GO:0006979;response to oxidative stress;1.00796866786169e-05!GO:0043066;negative regulation of apoptosis;1.03537810701856e-05!GO:0048475;coated membrane;1.56481657599295e-05!GO:0030117;membrane coat;1.56481657599295e-05!GO:0051188;cofactor biosynthetic process;1.56754768351456e-05!GO:0005773;vacuole;1.58229302158799e-05!GO:0048471;perinuclear region of cytoplasm;1.79566623633744e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.37234608241556e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.37234608241556e-05!GO:0045786;negative regulation of progression through cell cycle;2.37344003526244e-05!GO:0050789;regulation of biological process;2.39392392301198e-05!GO:0007264;small GTPase mediated signal transduction;2.44261676137823e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.57177370089908e-05!GO:0030018;Z disc;2.60847787876324e-05!GO:0009142;nucleoside triphosphate biosynthetic process;2.71055794105193e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.71055794105193e-05!GO:0006754;ATP biosynthetic process;2.88905629113459e-05!GO:0006753;nucleoside phosphate metabolic process;2.88905629113459e-05!GO:0005770;late endosome;2.93046260609986e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.97064586924058e-05!GO:0003713;transcription coactivator activity;2.99953211529662e-05!GO:0022890;inorganic cation transmembrane transporter activity;3.5294704771933e-05!GO:0009260;ribonucleotide biosynthetic process;3.56024685361831e-05!GO:0005912;adherens junction;3.71237194121034e-05!GO:0000323;lytic vacuole;4.26618285269937e-05!GO:0005764;lysosome;4.26618285269937e-05!GO:0044453;nuclear membrane part;4.89817207514623e-05!GO:0005788;endoplasmic reticulum lumen;5.82309387679155e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.51909699675672e-05!GO:0050794;regulation of cellular process;6.59834506435228e-05!GO:0005839;proteasome core complex (sensu Eukaryota);6.74751459703378e-05!GO:0005523;tropomyosin binding;6.85873872113243e-05!GO:0005798;Golgi-associated vesicle;7.14608663213195e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;7.81136655197933e-05!GO:0014706;striated muscle development;8.5818624071535e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;9.84873077832229e-05!GO:0016563;transcription activator activity;0.000101567631121272!GO:0042623;ATPase activity, coupled;0.000105362237339479!GO:0005525;GTP binding;0.000106225194955353!GO:0048522;positive regulation of cellular process;0.000108688472179536!GO:0007049;cell cycle;0.000119966264807057!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000129802490060658!GO:0007265;Ras protein signal transduction;0.000144051036230867!GO:0030133;transport vesicle;0.000151442376535799!GO:0044431;Golgi apparatus part;0.000169567727515417!GO:0045892;negative regulation of transcription, DNA-dependent;0.000178843843249676!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000203829689972624!GO:0006323;DNA packaging;0.000223938191579899!GO:0051427;hormone receptor binding;0.000234728135646372!GO:0043566;structure-specific DNA binding;0.000237587679508929!GO:0005762;mitochondrial large ribosomal subunit;0.000237832232283726!GO:0000315;organellar large ribosomal subunit;0.000237832232283726!GO:0006613;cotranslational protein targeting to membrane;0.000240000905027806!GO:0000245;spliceosome assembly;0.000247709010149677!GO:0005741;mitochondrial outer membrane;0.000248464105275273!GO:0032446;protein modification by small protein conjugation;0.000252958451088228!GO:0030532;small nuclear ribonucleoprotein complex;0.000294452982151207!GO:0005643;nuclear pore;0.000303985368629758!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000309381665659518!GO:0004812;aminoacyl-tRNA ligase activity;0.000309381665659518!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000309381665659518!GO:0016567;protein ubiquitination;0.000323649799089046!GO:0019843;rRNA binding;0.000346208237873902!GO:0031968;organelle outer membrane;0.00035271450398875!GO:0016197;endosome transport;0.000358924013088337!GO:0004298;threonine endopeptidase activity;0.000358924013088337!GO:0007005;mitochondrion organization and biogenesis;0.000376700341883556!GO:0000151;ubiquitin ligase complex;0.000378195079450798!GO:0051287;NAD binding;0.000390612900641535!GO:0006897;endocytosis;0.000390612900641535!GO:0010324;membrane invagination;0.000390612900641535!GO:0019867;outer membrane;0.000395279833770324!GO:0003012;muscle system process;0.000395279833770324!GO:0006936;muscle contraction;0.000395279833770324!GO:0000074;regulation of progression through cell cycle;0.000418085797277844!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000418085797277844!GO:0044440;endosomal part;0.000425208729717726!GO:0010008;endosome membrane;0.000425208729717726!GO:0065002;intracellular protein transport across a membrane;0.000435819813115784!GO:0035257;nuclear hormone receptor binding;0.000439438130586657!GO:0006941;striated muscle contraction;0.000443675158570131!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000450837733393271!GO:0031032;actomyosin structure organization and biogenesis;0.000491640229942727!GO:0051726;regulation of cell cycle;0.000508185381634251!GO:0045893;positive regulation of transcription, DNA-dependent;0.000508913051653754!GO:0008154;actin polymerization and/or depolymerization;0.00050910253996806!GO:0001666;response to hypoxia;0.000517580755692425!GO:0009108;coenzyme biosynthetic process;0.000560756877031136!GO:0043038;amino acid activation;0.000563194296812694!GO:0006418;tRNA aminoacylation for protein translation;0.000563194296812694!GO:0043039;tRNA aminoacylation;0.000563194296812694!GO:0006414;translational elongation;0.000568206043050594!GO:0015992;proton transport;0.000583561935684739!GO:0045941;positive regulation of transcription;0.00060091379050946!GO:0005865;striated muscle thin filament;0.000619172691484014!GO:0048518;positive regulation of biological process;0.000623318120076767!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.000628201735273902!GO:0033043;regulation of organelle organization and biogenesis;0.000628201735273902!GO:0006818;hydrogen transport;0.000692542839068834!GO:0050662;coenzyme binding;0.000693342760426661!GO:0005791;rough endoplasmic reticulum;0.000697534283978315!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000749442230135606!GO:0032561;guanyl ribonucleotide binding;0.000749442230135606!GO:0019001;guanyl nucleotide binding;0.000749442230135606!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000751809334221633!GO:0007243;protein kinase cascade;0.000756341697975203!GO:0030031;cell projection biogenesis;0.000756698917840721!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000773976842528075!GO:0030027;lamellipodium;0.000831121948446443!GO:0003697;single-stranded DNA binding;0.000845268221702745!GO:0008361;regulation of cell size;0.000862068159773162!GO:0007519;skeletal muscle development;0.000903529591229629!GO:0042254;ribosome biogenesis and assembly;0.000914120073731878!GO:0050657;nucleic acid transport;0.000941132555167896!GO:0051236;establishment of RNA localization;0.000941132555167896!GO:0050658;RNA transport;0.000941132555167896!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00095636267748875!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00095636267748875!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00095636267748875!GO:0046983;protein dimerization activity;0.000993118884510641!GO:0016049;cell growth;0.00101073449618915!GO:0006403;RNA localization;0.00110344456221911!GO:0005905;coated pit;0.00121608994015781!GO:0009117;nucleotide metabolic process;0.00124355070455388!GO:0016070;RNA metabolic process;0.00124355070455388!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00126405855109852!GO:0003746;translation elongation factor activity;0.00129860057517442!GO:0033017;sarcoplasmic reticulum membrane;0.00130271055390642!GO:0006752;group transfer coenzyme metabolic process;0.00131552885363532!GO:0009966;regulation of signal transduction;0.00133515908515268!GO:0033673;negative regulation of kinase activity;0.0013469318304825!GO:0006469;negative regulation of protein kinase activity;0.0013469318304825!GO:0001726;ruffle;0.00145140723933283!GO:0044262;cellular carbohydrate metabolic process;0.00156452721179948!GO:0003676;nucleic acid binding;0.00159271593903232!GO:0007266;Rho protein signal transduction;0.00162290777944694!GO:0043021;ribonucleoprotein binding;0.00177603433705884!GO:0043284;biopolymer biosynthetic process;0.00179595581479275!GO:0030832;regulation of actin filament length;0.00195070132650545!GO:0005083;small GTPase regulator activity;0.00198152837654767!GO:0000314;organellar small ribosomal subunit;0.00203254878857383!GO:0005763;mitochondrial small ribosomal subunit;0.00203254878857383!GO:0003724;RNA helicase activity;0.00205505404660635!GO:0032535;regulation of cellular component size;0.00217505138770241!GO:0005938;cell cortex;0.00238533266115391!GO:0016568;chromatin modification;0.00238533266115391!GO:0006118;electron transport;0.00238742990385933!GO:0051920;peroxiredoxin activity;0.00238742990385933!GO:0005913;cell-cell adherens junction;0.00248470604393164!GO:0015630;microtubule cytoskeleton;0.00263461443243682!GO:0065007;biological regulation;0.00263461443243682!GO:0016791;phosphoric monoester hydrolase activity;0.00271619585181564!GO:0001558;regulation of cell growth;0.00290852443490335!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.00305175086815837!GO:0043623;cellular protein complex assembly;0.00305249792505106!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00309019696566179!GO:0051276;chromosome organization and biogenesis;0.00309019696566179!GO:0031589;cell-substrate adhesion;0.00318488428280228!GO:0051087;chaperone binding;0.00340184110402256!GO:0016853;isomerase activity;0.00374392909944811!GO:0007160;cell-matrix adhesion;0.00374548479340456!GO:0030658;transport vesicle membrane;0.00380583818956253!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00380583818956253!GO:0003690;double-stranded DNA binding;0.00382094123635703!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00395025389554503!GO:0015002;heme-copper terminal oxidase activity;0.00395025389554503!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00395025389554503!GO:0004129;cytochrome-c oxidase activity;0.00395025389554503!GO:0051348;negative regulation of transferase activity;0.00405233384814371!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00405233384814371!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00405233384814371!GO:0035258;steroid hormone receptor binding;0.00407828865952632!GO:0006635;fatty acid beta-oxidation;0.00412486653128344!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00428753865882671!GO:0005885;Arp2/3 protein complex;0.00428753865882671!GO:0006333;chromatin assembly or disassembly;0.00429197846511087!GO:0006974;response to DNA damage stimulus;0.00429197846511087!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00429197846511087!GO:0015399;primary active transmembrane transporter activity;0.00429197846511087!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00431942071034784!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00442051817937067!GO:0005667;transcription factor complex;0.00458548810751338!GO:0005048;signal sequence binding;0.00471581719708737!GO:0000302;response to reactive oxygen species;0.0047832896031268!GO:0016859;cis-trans isomerase activity;0.0048176395294564!GO:0005769;early endosome;0.00486709556006247!GO:0006612;protein targeting to membrane;0.0048675043274856!GO:0030132;clathrin coat of coated pit;0.00488277191003583!GO:0000139;Golgi membrane;0.00488976465136699!GO:0065004;protein-DNA complex assembly;0.00509703398410712!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00519065991399675!GO:0030055;cell-matrix junction;0.00519794951362297!GO:0006607;NLS-bearing substrate import into nucleus;0.00528037229254277!GO:0005924;cell-substrate adherens junction;0.00531622643808891!GO:0055001;muscle cell development;0.00531622643808891!GO:0030239;myofibril assembly;0.00531622643808891!GO:0055002;striated muscle cell development;0.00531622643808891!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00531622643808891!GO:0008026;ATP-dependent helicase activity;0.00535714473810908!GO:0030118;clathrin coat;0.00571125877206835!GO:0007242;intracellular signaling cascade;0.0061207771748669!GO:0008064;regulation of actin polymerization and/or depolymerization;0.00620944260622047!GO:0031072;heat shock protein binding;0.00622327622241227!GO:0004386;helicase activity;0.0062448485600317!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00656807727592694!GO:0045445;myoblast differentiation;0.00660944570683998!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00705606995059663!GO:0051028;mRNA transport;0.0072056319835058!GO:0030867;rough endoplasmic reticulum membrane;0.00735096006377234!GO:0045454;cell redox homeostasis;0.00737225022008708!GO:0046314;phosphocreatine biosynthetic process;0.00741253666959269!GO:0006603;phosphocreatine metabolic process;0.00741253666959269!GO:0030674;protein binding, bridging;0.00746467316291886!GO:0003702;RNA polymerase II transcription factor activity;0.00746467316291886!GO:0046930;pore complex;0.00747098814890144!GO:0030041;actin filament polymerization;0.00771664802131058!GO:0004721;phosphoprotein phosphatase activity;0.00787460122207146!GO:0005977;glycogen metabolic process;0.00799187482840977!GO:0009967;positive regulation of signal transduction;0.00807702930760847!GO:0030518;steroid hormone receptor signaling pathway;0.00819319973601666!GO:0030695;GTPase regulator activity;0.00835896325213433!GO:0016787;hydrolase activity;0.00851992090704095!GO:0005862;muscle thin filament tropomyosin;0.00861421765814035!GO:0022402;cell cycle process;0.00863693918525746!GO:0008139;nuclear localization sequence binding;0.00867877443108426!GO:0008287;protein serine/threonine phosphatase complex;0.00869452747842066!GO:0006402;mRNA catabolic process;0.009108970242867!GO:0044420;extracellular matrix part;0.00953789155629634!GO:0008234;cysteine-type peptidase activity;0.00953789155629634!GO:0030100;regulation of endocytosis;0.00969610053987855!GO:0051262;protein tetramerization;0.00969725604498561!GO:0006891;intra-Golgi vesicle-mediated transport;0.00994861444547214!GO:0043488;regulation of mRNA stability;0.0101352142740818!GO:0043487;regulation of RNA stability;0.0101352142740818!GO:0006892;post-Golgi vesicle-mediated transport;0.0101828864643365!GO:0004601;peroxidase activity;0.0103090885846841!GO:0016684;oxidoreductase activity, acting on peroxide as acceptor;0.0103090885846841!GO:0051252;regulation of RNA metabolic process;0.0104488609639442!GO:0006693;prostaglandin metabolic process;0.0105785771183924!GO:0006692;prostanoid metabolic process;0.0105785771183924!GO:0033116;ER-Golgi intermediate compartment membrane;0.0105869223660403!GO:0005813;centrosome;0.0107624398991807!GO:0008250;oligosaccharyl transferase complex;0.010781308560649!GO:0019902;phosphatase binding;0.0108164267398183!GO:0042805;actinin binding;0.0108164267398183!GO:0017022;myosin binding;0.0109846565451996!GO:0048468;cell development;0.0112520423150729!GO:0001725;stress fiber;0.0113101102327651!GO:0032432;actin filament bundle;0.0113101102327651!GO:0016126;sterol biosynthetic process;0.0113850403792265!GO:0008286;insulin receptor signaling pathway;0.0114584324219207!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0115501688239827!GO:0043492;ATPase activity, coupled to movement of substances;0.0115896000996294!GO:0051049;regulation of transport;0.0117663670365565!GO:0060090;molecular adaptor activity;0.0118315033248546!GO:0019904;protein domain specific binding;0.0119248162000008!GO:0030134;ER to Golgi transport vesicle;0.0119804809270541!GO:0008186;RNA-dependent ATPase activity;0.0122807201666216!GO:0030660;Golgi-associated vesicle membrane;0.0123742584422645!GO:0043681;protein import into mitochondrion;0.0124785194531696!GO:0051168;nuclear export;0.0127164587940824!GO:0043034;costamere;0.013102385732539!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0132074657336988!GO:0030127;COPII vesicle coat;0.0132753967520314!GO:0012507;ER to Golgi transport vesicle membrane;0.0132753967520314!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.0138934046427968!GO:0045947;negative regulation of translational initiation;0.0138934046427968!GO:0009893;positive regulation of metabolic process;0.0140317608589134!GO:0007050;cell cycle arrest;0.0140926925119883!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0142104550238945!GO:0005665;DNA-directed RNA polymerase II, core complex;0.014352029181312!GO:0000785;chromatin;0.0146174855473522!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0151507878661523!GO:0045792;negative regulation of cell size;0.0153463307095658!GO:0030663;COPI coated vesicle membrane;0.015487039016437!GO:0030126;COPI vesicle coat;0.015487039016437!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0157559036104281!GO:0048500;signal recognition particle;0.0157620132400159!GO:0016584;nucleosome positioning;0.0157656597359227!GO:0019208;phosphatase regulator activity;0.0162367817264666!GO:0015631;tubulin binding;0.0163949485915968!GO:0035035;histone acetyltransferase binding;0.0165476957821175!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0165958926347602!GO:0017166;vinculin binding;0.0167277363334965!GO:0004674;protein serine/threonine kinase activity;0.0167583213104449!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.016867352958815!GO:0051146;striated muscle cell differentiation;0.0170554374959213!GO:0005869;dynactin complex;0.0172042695052433!GO:0006334;nucleosome assembly;0.0172082831140458!GO:0009719;response to endogenous stimulus;0.0173685348891965!GO:0030308;negative regulation of cell growth;0.0183647513469123!GO:0016072;rRNA metabolic process;0.0187515275231845!GO:0008654;phospholipid biosynthetic process;0.0187763324075054!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0198876158069408!GO:0006073;glucan metabolic process;0.0198876158069408!GO:0006401;RNA catabolic process;0.0200055097803757!GO:0004197;cysteine-type endopeptidase activity;0.0201182427233479!GO:0048741;skeletal muscle fiber development;0.0201182427233479!GO:0048747;muscle fiber development;0.0201182427233479!GO:0004576;oligosaccharyl transferase activity;0.0202679893125532!GO:0006364;rRNA processing;0.0205314164379176!GO:0022415;viral reproductive process;0.0205314164379176!GO:0019318;hexose metabolic process;0.0209239175886573!GO:0008047;enzyme activator activity;0.0209239175886573!GO:0005583;fibrillar collagen;0.0209465665665645!GO:0030521;androgen receptor signaling pathway;0.0211678324180069!GO:0051540;metal cluster binding;0.0211678324180069!GO:0051536;iron-sulfur cluster binding;0.0211678324180069!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0213288983979779!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0219009292250378!GO:0044430;cytoskeletal part;0.022121656555701!GO:0050811;GABA receptor binding;0.0238025743209619!GO:0045098;type III intermediate filament;0.0238137873079017!GO:0040008;regulation of growth;0.0244953015875563!GO:0031902;late endosome membrane;0.0247891275206079!GO:0042542;response to hydrogen peroxide;0.0249241226039625!GO:0043065;positive regulation of apoptosis;0.0249241226039625!GO:0051101;regulation of DNA binding;0.0254347359583388!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0258042765655018!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0262953098190845!GO:0006937;regulation of muscle contraction;0.0265063465279912!GO:0007009;plasma membrane organization and biogenesis;0.0265256869698838!GO:0008629;induction of apoptosis by intracellular signals;0.0279588311862236!GO:0030140;trans-Golgi network transport vesicle;0.0280007034064348!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0287395856168488!GO:0006417;regulation of translation;0.0289687250000714!GO:0030125;clathrin vesicle coat;0.0289687250000714!GO:0030665;clathrin coated vesicle membrane;0.0289687250000714!GO:0033018;sarcoplasmic reticulum lumen;0.0289762705296827!GO:0004004;ATP-dependent RNA helicase activity;0.0289762705296827!GO:0016311;dephosphorylation;0.0289762705296827!GO:0005518;collagen binding;0.0291196700653561!GO:0048487;beta-tubulin binding;0.0293147334233982!GO:0042692;muscle cell differentiation;0.029454054125327!GO:0051539;4 iron, 4 sulfur cluster binding;0.0297691009547764!GO:0005790;smooth endoplasmic reticulum;0.0303697462566492!GO:0031143;pseudopodium;0.0303697462566492!GO:0019395;fatty acid oxidation;0.0304937022743993!GO:0051289;protein homotetramerization;0.0305898321886123!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0305898321886123!GO:0045047;protein targeting to ER;0.0305898321886123!GO:0031497;chromatin assembly;0.030726064582164!GO:0048037;cofactor binding;0.0310627269053872!GO:0012506;vesicle membrane;0.0313758427140691!GO:0005925;focal adhesion;0.0317455840798779!GO:0008601;protein phosphatase type 2A regulator activity;0.0317870032999745!GO:0000059;protein import into nucleus, docking;0.031862243661363!GO:0006695;cholesterol biosynthetic process;0.0318706464580844!GO:0048041;focal adhesion formation;0.0318706464580844!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0318706464580844!GO:0010257;NADH dehydrogenase complex assembly;0.0318706464580844!GO:0033108;mitochondrial respiratory chain complex assembly;0.0318706464580844!GO:0003729;mRNA binding;0.0320542943596245!GO:0048154;S100 beta binding;0.0320542943596245!GO:0008147;structural constituent of bone;0.0323789971072547!GO:0005815;microtubule organizing center;0.0324560899975742!GO:0006399;tRNA metabolic process;0.0326119046347646!GO:0005996;monosaccharide metabolic process;0.032833208476233!GO:0006376;mRNA splice site selection;0.0331078769206148!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0331078769206148!GO:0046848;hydroxyapatite binding;0.0332934546224288!GO:0006006;glucose metabolic process;0.0335022960299844!GO:0006839;mitochondrial transport;0.0335602039846656!GO:0048660;regulation of smooth muscle cell proliferation;0.0340816222060002!GO:0006778;porphyrin metabolic process;0.0343076199824722!GO:0033013;tetrapyrrole metabolic process;0.0343076199824722!GO:0004111;creatine kinase activity;0.0348269727666517!GO:0051261;protein depolymerization;0.035779113689232!GO:0043068;positive regulation of programmed cell death;0.0358232925979684!GO:0030522;intracellular receptor-mediated signaling pathway;0.0369602053879431!GO:0050681;androgen receptor binding;0.0369695455190819!GO:0030137;COPI-coated vesicle;0.0371094294125675!GO:0015036;disulfide oxidoreductase activity;0.037118809591932!GO:0043022;ribosome binding;0.0372015309689679!GO:0019888;protein phosphatase regulator activity;0.0378338976162414!GO:0006942;regulation of striated muscle contraction;0.0378830759467371!GO:0055092;sterol homeostasis;0.0386966656635185!GO:0042632;cholesterol homeostasis;0.0386966656635185!GO:0005100;Rho GTPase activator activity;0.0401290511509342!GO:0051393;alpha-actinin binding;0.0401755706934988!GO:0048306;calcium-dependent protein binding;0.040251912261927!GO:0008312;7S RNA binding;0.0406548271079896!GO:0004364;glutathione transferase activity;0.0409217324074188!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0409217324074188!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0412772372480584!GO:0001516;prostaglandin biosynthetic process;0.041590744438169!GO:0046457;prostanoid biosynthetic process;0.041590744438169!GO:0006007;glucose catabolic process;0.041590744438169!GO:0006779;porphyrin biosynthetic process;0.041590744438169!GO:0033014;tetrapyrrole biosynthetic process;0.041590744438169!GO:0030216;keratinocyte differentiation;0.0417409911366221!GO:0005626;insoluble fraction;0.0417409911366221!GO:0045113;regulation of integrin biosynthetic process;0.0421025713306188!GO:0045112;integrin biosynthetic process;0.0421025713306188!GO:0007015;actin filament organization;0.0421062934930638!GO:0006112;energy reserve metabolic process;0.0428597789531717!GO:0000159;protein phosphatase type 2A complex;0.042863104756302!GO:0045045;secretory pathway;0.0429148109905209!GO:0009266;response to temperature stimulus;0.0429276398028536!GO:0048659;smooth muscle cell proliferation;0.0433065065133163!GO:0031326;regulation of cellular biosynthetic process;0.0435701560151!GO:0031529;ruffle organization and biogenesis;0.0443084626615993!GO:0046822;regulation of nucleocytoplasmic transport;0.0443328834502806!GO:0014866;skeletal myofibril assembly;0.0443328834502806!GO:0030659;cytoplasmic vesicle membrane;0.0443328834502806!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0454864901168711!GO:0051248;negative regulation of protein metabolic process;0.0455921371328337!GO:0006650;glycerophospholipid metabolic process;0.0459381200241313!GO:0031901;early endosome membrane;0.0461579397138036!GO:0065009;regulation of a molecular function;0.0461743755764093!GO:0042803;protein homodimerization activity;0.0475381597021548!GO:0005200;structural constituent of cytoskeleton;0.0476904817309681!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0479700896391831!GO:0004784;superoxide dismutase activity;0.0479700896391831!GO:0008180;signalosome;0.0499683673213171
+|sample_id=10209
+|sample_note=
+|sample_sex=28
+|sample_species=Human (Homo sapiens)
+|sample_strain=
+|sample_tissue=
+|top_motifs=MEF2{A,B,C,D}:5.61196180699;NR1H4:3.96404242888;TBP:3.7962538106;NR5A1,2:3.28126490671;TBX4,5:2.86280608259;MYOD1:2.84009449375;TFCP2:2.72264858926;ESR1:2.65812466028;NFE2L1:2.56703412453;HMX1:2.54883574426;TAL1_TCF{3,4,12}:2.50799343005;RXRA_VDR{dimer}:2.33600033877;TLX2:2.31562146086;RXR{A,B,G}_{NR1H2,PPAR}dimers:2.26102509303;TGIF1:2.1930115062;SNAI1..3:2.18957137949;TFAP2{A,C}:2.10926322123;TFAP4:2.10370630453;LMO2:2.08932543912;HAND1,2:2.04620125224;ESRRA:1.95584912042;GLI1..3:1.80931942402;SPZ1:1.80147771441;SRF:1.78623230924;TLX1..3_NFIC{dimer}:1.78035407765;NR6A1:1.76145061219;ZEB1:1.73516845693;SMAD1..7,9:1.71767936149;GCM1,2:1.70999634925;RBPJ:1.64272150846;MAZ:1.63223461973;FOXO1,3,4:1.61675297774;FOXL1:1.59841160708;ZIC1..3:1.58871034931;ZNF148:1.57623217605;AR:1.51613125847;SP1:1.49074892653;NHLH1,2:1.43170050136;PDX1:1.42700844051;HOX{A4,D4}:1.42374584659;SOX5:1.38128459689;RFX2..5_RFXANK_RFXAP:1.36298693989;PAX6:1.32987745865;IRF7:1.26819340116;MYFfamily:1.22285547815;PATZ1:1.22079414847;KLF4:1.2185733849;MAFB:1.17623070794;MYBL2:1.16268079286;ZNF423:1.15843810524;MTF1:1.13279430153;FOX{D1,D2}:1.12017998003;NFATC1..3:1.0889251308;GATA4:1.08435806295;HIC1:1.08307177142;T:1.07585362086;GTF2A1,2:1.06929396392;NKX2-2,8:1.02287284555;RREB1:0.980064876786;NFIX:0.972760135995;ZNF384:0.937080348026;ATF2:0.902737267147;PPARG:0.865467502179;GTF2I:0.856499222402;TP53:0.853238074234;NKX6-1,2:0.780701797713;BPTF:0.752540004186;ZNF238:0.75097613257;TEAD1:0.741281271173;IKZF2:0.732084399857;ATF6:0.728367465419;FOX{F1,F2,J1}:0.715453116023;HES1:0.711964508576;FOXA2:0.693917357743;HSF1,2:0.674232619786;FOXN1:0.668005246931;UFEwm:0.650014169425;NKX3-2:0.648794970108;MED-1{core}:0.645292236866;XCPE1{core}:0.615359548554;PAX5:0.594099197192;XBP1:0.580444743003;CUX2:0.539030185726;MZF1:0.538059692689;NKX2-3_NKX2-5:0.535618702664;POU6F1:0.526745612448;ALX1:0.509456148996;EP300:0.508977836827;ALX4:0.467487903149;RXR{A,B,G}:0.465975855766;YY1:0.46596276337;NANOG:0.401403404918;REST:0.40114374;EBF1:0.385396216669;MTE{core}:0.380226898107;GATA6:0.379274330416;TFAP2B:0.372803823707;ETS1,2:0.355683348095;RFX1:0.339068793515;IKZF1:0.300051732283;CDC5L:0.278118194807;ARID5B:0.263967235278;POU2F1..3:0.254954071782;EVI1:0.186782783296;POU5F1:0.175259293733;PITX1..3:0.164729773223;PAX1,9:0.146414541416;PBX1:0.146349368171;EGR1..3:0.104746118632;JUN:0.0832958308451;IRF1,2:0.0645077977105;HNF4A_NR2F1,2:0.0607134404148;SOX{8,9,10}:0.0556137766978;FOXQ1:0.0484390902421;HBP1_HMGB_SSRP1_UBTF:0.0454143653537;GFI1B:0.0350801980635;ELF1,2,4:0.0334135408275;STAT5{A,B}:0.0328965524019;DMAP1_NCOR{1,2}_SMARC:0.0175184562831;SPI1:0.0137244080886;POU3F1..4:-0.00230503336224;ATF4:-0.042753527621;PRDM1:-0.0431704842127;CDX1,2,4:-0.0436305951378;ZFP161:-0.051886519546;FOXP1:-0.0605995041719;SREBF1,2:-0.0713741267115;BREu{core}:-0.0842191218801;NR3C1:-0.088720111794;STAT2,4,6:-0.0989056898655;CEBPA,B_DDIT3:-0.108247837143;ZNF143:-0.123842677557;SPIB:-0.126483237775;LEF1_TCF7_TCF7L1,2:-0.154839364061;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.157322148287;GFI1:-0.179046147143;STAT1,3:-0.188191435788;EN1,2:-0.199398992816;NFE2L2:-0.21081965604;POU1F1:-0.217296449432;FOSL2:-0.227724355285;FOXM1:-0.228877191976;ZBTB6:-0.247151791775;NKX2-1,4:-0.293630275924;NFY{A,B,C}:-0.299023705942;TOPORS:-0.334712631348;PAX3,7:-0.377526326881;NFIL3:-0.418428709331;NFE2:-0.418992112021;PAX2:-0.423861936178;LHX3,4:-0.444452487613;FOXP3:-0.457761420478;SOX17:-0.48258330601;ATF5_CREB3:-0.502076143428;NFKB1_REL_RELA:-0.525840554635;FOS_FOS{B,L1}_JUN{B,D}:-0.525867686029;RUNX1..3:-0.53742729271;SOX2:-0.569798789477;E2F1..5:-0.582414761521;HLF:-0.631778215635;ZBTB16:-0.63235240239;HNF1A:-0.63677402647;NANOG{mouse}:-0.678474987927;GZF1:-0.722583748313;NRF1:-0.724758427118;bHLH_family:-0.799177295818;BACH2:-0.819656796534;AIRE:-0.824484164744;NKX3-1:-0.885108538871;CREB1:-0.91959773943;RORA:-0.934143958107;HOX{A6,A7,B6,B7}:-0.937979666827;OCT4_SOX2{dimer}:-0.961344324723;VSX1,2:-1.09474625664;TEF:-1.16644783584;CRX:-1.17019351543;TFDP1:-1.27950503847;HMGA1,2:-1.29665469638;DBP:-1.29997547187;ONECUT1,2:-1.3488522013;MYB:-1.38599907877;HIF1A:-1.45520774942;FOX{I1,J2}:-1.48106638637;ELK1,4_GABP{A,B1}:-1.49762547859;HOX{A5,B5}:-1.51611493142;AHR_ARNT_ARNT2:-1.66244304754;PAX4:-1.68873363185;PRRX1,2:-1.72881840546;HOXA9_MEIS1:-1.73385942474;FOXD3:-1.85081081981;ADNP_IRX_SIX_ZHX:-1.92391232388;PAX8:-3.18167568425
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10209-103G2;search_select_hide=table117:FF:10209-103G2
 }}

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FF:10209-103G2: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 13:56, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0