FF:10689-109F5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004901 | ||
|accession_numbers=CAGE;DRX007952;DRR008824;DRZ000249;DRZ001634;DRZ011599;DRZ012984 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0003134,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0010317,UBERON:0003100,UBERON:0000474 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet=DOID: | |ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:154,DOID:4236 | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:10689-109F5 | |fonse_cell_line=FF:10689-109F5 | ||
|fonse_cell_line_closure=FF:10689-109F5 | |fonse_cell_line_closure=FF:10689-109F5 | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mixed%2520mullerian%2520tumor%2520cell%2520line%253aHTMMT.CNhs11944.10689-109F5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mixed%2520mullerian%2520tumor%2520cell%2520line%253aHTMMT.CNhs11944.10689-109F5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mixed%2520mullerian%2520tumor%2520cell%2520line%253aHTMMT.CNhs11944.10689-109F5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mixed%2520mullerian%2520tumor%2520cell%2520line%253aHTMMT.CNhs11944.10689-109F5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mixed%2520mullerian%2520tumor%2520cell%2520line%253aHTMMT.CNhs11944.10689-109F5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10689-109F5 | |id=FF:10689-109F5 | ||
|is_a=DOID:4236;;EFO:0002091;;FF:0000003;;FF:0000210;;UBERON:0003134 | |is_a=DOID:4236;;EFO:0002091;;FF:0000003;;FF:0000210;;UBERON:0003134 | ||
|is_obsolete= | |||
|library_id=CNhs11944 | |||
|library_id_phase_based=2:CNhs11944 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10689 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10689 | |||
|name=mixed mullerian tumor cell line:HTMMT | |name=mixed mullerian tumor cell line:HTMMT | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11944,LSID836,release011,COMPLETED | |profile_hcage=CNhs11944,LSID836,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.698495002917389,0.218855645944531,0.913105535696155,0.284127503530922,0,0,0,0.0309157960520026,0,0,0,0,0,0,0,0.297285381790176,0,0.777881864718924,0,0.279406993507616,0,0,0,0.120897749676473,0,0,0.384670608659926,0,0,0,0,0,0,0,0,0,0,0.218855645944531,0,0.927525706455392,0.218855645944531,0.123070465553216,0,0,0,0,0,0,0.085212801859431,0,0,0,0,0,0,0,0.200293020547571,0,0,0.0257268383401195,0,0,0,0,0,0,0,0,0.720897227817683,0,0,0,0,0,0,0,0,0.0156190838498071,0,0,0.123070465553216,0,0,0,-0.0206945422507411,0,0,0,0.0170163644581232,-0.149662169919261,0,0,0,0.123070465553216,0.120820294706824,0.356647002922725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0348383611458528,0.363694581123589,0,0,0.84178338514104,1.2139053802361,0,0,0.123070465553216,0.061535232776608,0,0 | |||
|repeat_enrich_byname=0,0.123070465553216,0,0,0.120820294706824,0,0.123070465553216,0,0,0,0,0,0,0,0,0,-0.0283232293410336,0,0.694988770767789,-0.143515142523472,0.148642690895088,0,0.144864973962086,0,0,0,0,0,0,0,0,0,0.430694120062668,0,0.0726579139639016,0.061535232776608,0,0,0,0.170963055748873,-0.305472230898407,0,0.172223451679023,0.150511384867163,0,0,0,0,-0.147170203781108,0,0.00219098175947582,0.0403502972297991,0.18012219644293,-0.228801663341253,-0.04680465889238,0,0,0,-0.0598430577216717,-0.459564926377656,0,0,-0.121779851751874,0.028828305111037,0,0,-0.391044581551635,0,0.133188013983033,-0.126893075708774,0,0.0327480818355635,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,0.231825390336263,0,0.123070465553216,0.123070465553216,0,0.0366322524135138,0,0.0663779112607388,0.80532316802024,-0.0750194902782684,-0.0716716548575195,0.148096085569954,0,-0.302389727009913,0.0152856687980843,-0.0851688045669485,0,-0.147401849371139,-0.189981719549847,0,-0.0206945422507411,-0.488987247323835,-0.0554588099787905,-0.241914505392149,-0.0229257678441418,0.313544895016586,-0.0828857368869993,0,0,0,0.00674838156501434,0,0.189760793752547,0.0275124839620148,0.0626497254538342,0.122728469310884,-0.152042122305548,0.088360389104822,0.0849788760625603,-0.0395325284566706,-0.238580806952064,0,0.082153814634631,0,0.218855645944531,0,0.0167714945203757,-0.22709812009209,-0.0193952803568704,0,0.0336497366278077,-0.0683442610773682,0.109427822972265,0.11993995755972,-0.165108973163297,0,0.123070465553216,0.216529666581453,0.218855645944531,0,0,0,0,0.0159047027935233,0.338581165706534,-0.109785096002328,0,-0.118641869405599,0.061535232776608,-0.115438789790792,0,0.0148683596056494,0.204265248915477,0,-0.162022071980626,0,-0.105958930035771,-0.332967287824524,0.0632779211963554,-0.299324339838521,0.73686007064104,0.276980345300931,-0.190753453311537,0.0170163644581232,-0.0959768391331621,0.0879416481313317,-0.0881268324752877,0,0.0797823964562836,-0.120684144606292,0.0150579237923594,-0.0659027057907835,0,-0.0832098043061513,0,0.322991583980927,0,-0.159068902849187,0.0183802355419922,0.0328318521844868,-0.0322124756563409,0,0.0519258927568338,0.28416032844278,0,0,0,0,-0.150367083334639,0.0741962022898611,-0.150115195087981,-0.029561633706929,0,-0.231266171374424,0,0,0.123064146093952,0.603182757527303,0,-0.111965806534837,0.111694313604287,0.213307511816903,-0.115971073434934,0,0,-0.224417439770006,0,0,-0.133806837052857,-0.0636048451378017,-0.0233524311368247,0.0439590403034207,-0.00752316856051815,0.188662572335921,0,0,-0.0544573004119592,0,0.337867764984465,0,0,0.109402843407624,-0.116628112990133,0,0,0,0.0153757585535951,0.0379981100827344,0,0,0,0,0,-0.0183311240420675,0.194090312500443,0.203980656798784,0.218855645944531,-0.000821567579896265,0,0,0,0,0.218855645944531,-0.0699784990450598,0,0,0.210945154174588,-0.00425205947718199,5.30498767961907e-05,0.109427822972265,0,0,0,0.205559495669244,0.0156190838498071,0.123070465553216,-0.00879224094441525,0,0,0,0,0.211144392000965,0,0,0,0.061535232776608,0.363552441169055,0.0969528586103635,0,0,0,0.416008624055274,0,0,0.123070465553216,0,-0.142800739604085,0,0,0.258847579647921,0,-0.175225778553711,0.137273766397689,0,-0.312382375336683,-0.0107010739400959,0.550231865356657,0,0,0.297466855225345,0,0,-0.21842076862105,0,0.297285381790176,0.061535232776608,0,0,0,0,0.123070465553216,0,0.00454113354477523,0,0,0,0,0,0.123070465553216,0,0,0,0,0,-0.253078114572616,0.271470524465078,0,0,0,0,0,0,0,0.0853217998933624,0.121840199753255,0,0,0,0,0,0.720897227817683,0.061535232776608,0,0.159621759797708,0,0,0,0,0,0.200293020547571,0,0,0,0,0.349399361117312,0,0,0.782712715995144,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,1.07220290886823,0,0,0,0,0,0.218855645944531,0,0.913105535696155,0,0.218855645944531,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,0.698495002917389,0,0,0,0,0,0,0.181847290561794,0,0,0,0,0,0,0,0,0,0,0.061535232776608,0,0,0,0.3158380138592,-0.005195773916782,0.0100778658172666,-0.00856624117407462,0,0,-0.0507810620712475,0,0,0,0,0,0,0.248066569479089,0.123070465553216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363694581123589,0,0,0,0,0,0,0.0263146875673691,0,0,0,0,0,0,0,0.120897749676473,0,0.123070465553216,-0.0304975770239179,0,0,0,0,0.515126696523346,0,-0.0291632414373153,0.190561065614459,0.00141754572908265,0,0,0,0.0071496602941532,0,0,0.051493396577724,0,0.0562930781343151,0,0,0,0,0,0,0,0,0.218855645944531,0,0,0,0,0,0,0,0,0.123070465553216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777881864718924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123070465553216,0.061535232776608,0,0,0,0,0,0,0.075416459696849,0.123070465553216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217266913521538,0,0,0,0.534056518525298,0,0,0,0,0,0,0.297285381790176,0,0.218855645944531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123070465553216,0,0,0,0.791643268004415,0,0,0,0,0,0,0,0,0.218855645944531,0,0,0,0,0.469405123199734,0,0.212908749560149,0,0,0,0,0,0,0,0,0,0,0,0.123070465553216,0,0,0,0,0.52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| |||
|rna_box=109 | |rna_box=109 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=11.20041 | |rna_weight_ug=11.20041 | ||
|sample_age=66 | |sample_age=66 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB0660 | |sample_cell_catalog=RCB0660 | ||
|sample_cell_line=HTMMT | |sample_cell_line=HTMMT | ||
| Line 69: | Line 91: | ||
|sample_ethnicity=unknown | |sample_ethnicity=unknown | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.53322198208754e-267!GO:0043231;intracellular membrane-bound organelle;7.55061280292482e-225!GO:0043227;membrane-bound organelle;1.32274377404626e-224!GO:0043226;organelle;9.93881554213136e-220!GO:0043229;intracellular organelle;4.05687999946456e-219!GO:0005737;cytoplasm;6.67209748664318e-187!GO:0044422;organelle part;3.75528889764811e-148!GO:0044446;intracellular organelle part;1.36086087957032e-146!GO:0044444;cytoplasmic part;2.60401959748541e-132!GO:0032991;macromolecular complex;1.52994369332538e-105!GO:0044237;cellular metabolic process;8.14623480917077e-98!GO:0005634;nucleus;1.05132729844889e-97!GO:0044238;primary metabolic process;2.68529461559018e-97!GO:0043170;macromolecule metabolic process;4.18150214545608e-92!GO:0030529;ribonucleoprotein complex;5.80886309994647e-91!GO:0043233;organelle lumen;8.04830646443668e-80!GO:0031974;membrane-enclosed lumen;8.04830646443668e-80!GO:0044428;nuclear part;1.00553406641997e-79!GO:0005739;mitochondrion;2.04744677576662e-76!GO:0003723;RNA binding;2.79481879731017e-73!GO:0005515;protein binding;5.02656734759855e-72!GO:0043283;biopolymer metabolic process;4.54208339912956e-55!GO:0005840;ribosome;4.14829184233801e-54!GO:0043234;protein complex;3.10478387799786e-53!GO:0006396;RNA processing;2.53785617702323e-52!GO:0010467;gene expression;5.87667873733334e-52!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.20989546093906e-51!GO:0031090;organelle membrane;1.34294685571208e-50!GO:0016043;cellular component organization and biogenesis;3.32126789962673e-49!GO:0044429;mitochondrial part;8.37099702343582e-49!GO:0006412;translation;1.09879974381218e-48!GO:0033036;macromolecule localization;2.83930903732547e-48!GO:0015031;protein transport;2.2143505998002e-47!GO:0019538;protein metabolic process;8.31304431439652e-47!GO:0003735;structural constituent of ribosome;1.29009731964643e-45!GO:0031981;nuclear lumen;2.15196331143725e-45!GO:0008104;protein localization;2.3663683968716e-44!GO:0045184;establishment of protein localization;3.35427862366785e-44!GO:0031967;organelle envelope;6.21668925243923e-43!GO:0031975;envelope;1.17695550632382e-42!GO:0044260;cellular macromolecule metabolic process;6.70186238769716e-41!GO:0044267;cellular protein metabolic process;2.01239332537113e-40!GO:0033279;ribosomal subunit;7.38506710115455e-40!GO:0046907;intracellular transport;1.30872081690517e-39!GO:0016071;mRNA metabolic process;1.47020975686748e-39!GO:0044249;cellular biosynthetic process;1.02339774073704e-37!GO:0008380;RNA splicing;1.52231781320371e-36!GO:0009058;biosynthetic process;1.65353759489546e-36!GO:0009059;macromolecule biosynthetic process;7.76281223647159e-35!GO:0005829;cytosol;8.52567896824349e-35!GO:0003676;nucleic acid binding;1.13813532164452e-33!GO:0006397;mRNA processing;2.04014154425875e-33!GO:0006886;intracellular protein transport;1.10475010141816e-32!GO:0065003;macromolecular complex assembly;1.33447966599922e-32!GO:0043228;non-membrane-bound organelle;4.01988255580298e-30!GO:0043232;intracellular non-membrane-bound organelle;4.01988255580298e-30!GO:0005654;nucleoplasm;7.6203919425334e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.42377525685772e-29!GO:0006259;DNA metabolic process;4.61801532410399e-29!GO:0006996;organelle organization and biogenesis;4.79214057564242e-29!GO:0005740;mitochondrial envelope;2.08568187553598e-28!GO:0022607;cellular component assembly;2.26026580256278e-28!GO:0019866;organelle inner membrane;3.0548616889702e-28!GO:0016070;RNA metabolic process;2.6451725056694e-27!GO:0005681;spliceosome;6.73829438806156e-27!GO:0031966;mitochondrial membrane;9.76439923183959e-27!GO:0051649;establishment of cellular localization;1.01010656762154e-26!GO:0051641;cellular localization;2.6525529789271e-26!GO:0005743;mitochondrial inner membrane;5.37942994824552e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.80915997626618e-25!GO:0000166;nucleotide binding;2.01893182823497e-25!GO:0044451;nucleoplasm part;1.47329013837665e-24!GO:0007049;cell cycle;1.52542601830266e-24!GO:0031980;mitochondrial lumen;1.42569672105355e-23!GO:0005759;mitochondrial matrix;1.42569672105355e-23!GO:0006119;oxidative phosphorylation;1.09907243613234e-22!GO:0016462;pyrophosphatase activity;1.43398002582768e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.81904796453843e-22!GO:0044455;mitochondrial membrane part;2.85333787343784e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;2.865384138239e-22!GO:0006457;protein folding;3.76170101287043e-22!GO:0017111;nucleoside-triphosphatase activity;1.84750640412423e-21!GO:0015935;small ribosomal subunit;4.06263229576331e-21!GO:0012505;endomembrane system;2.32562588656027e-20!GO:0015934;large ribosomal subunit;6.64383966958355e-20!GO:0044445;cytosolic part;8.5810723996872e-20!GO:0016874;ligase activity;1.24151922836739e-19!GO:0006974;response to DNA damage stimulus;4.48505414751529e-19!GO:0005761;mitochondrial ribosome;1.8425100447531e-18!GO:0000313;organellar ribosome;1.8425100447531e-18!GO:0032553;ribonucleotide binding;2.18755018192729e-18!GO:0032555;purine ribonucleotide binding;2.18755018192729e-18!GO:0022402;cell cycle process;3.26172306385729e-18!GO:0006512;ubiquitin cycle;3.33963304404259e-18!GO:0048770;pigment granule;3.74358713641141e-18!GO:0042470;melanosome;3.74358713641141e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;4.07363826585635e-18!GO:0005783;endoplasmic reticulum;5.83459599495924e-18!GO:0019941;modification-dependent protein catabolic process;6.34724307291926e-18!GO:0043632;modification-dependent macromolecule catabolic process;6.34724307291926e-18!GO:0008134;transcription factor binding;9.06382483202298e-18!GO:0044265;cellular macromolecule catabolic process;1.02991094551425e-17!GO:0017076;purine nucleotide binding;1.12273664862735e-17!GO:0044257;cellular protein catabolic process;1.50494786446781e-17!GO:0006511;ubiquitin-dependent protein catabolic process;1.64588627136989e-17!GO:0000502;proteasome complex (sensu Eukaryota);2.15253308525868e-17!GO:0005746;mitochondrial respiratory chain;2.23752872588647e-17!GO:0005730;nucleolus;3.6845069375111e-17!GO:0051186;cofactor metabolic process;9.05543929870643e-17!GO:0000278;mitotic cell cycle;1.11369846237069e-16!GO:0022618;protein-RNA complex assembly;1.42907536078565e-16!GO:0006281;DNA repair;1.78294607313412e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.27781765483627e-16!GO:0051082;unfolded protein binding;2.3458461812682e-16!GO:0006605;protein targeting;2.88883576870255e-16!GO:0043285;biopolymer catabolic process;3.24507414411204e-16!GO:0044432;endoplasmic reticulum part;9.4571992035582e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.25344016391726e-15!GO:0003954;NADH dehydrogenase activity;1.25344016391726e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.25344016391726e-15!GO:0044248;cellular catabolic process;2.75838426165127e-15!GO:0005635;nuclear envelope;3.57221724601658e-15!GO:0048193;Golgi vesicle transport;3.88284379263572e-15!GO:0031965;nuclear membrane;4.56367258460617e-15!GO:0009057;macromolecule catabolic process;6.11830226114188e-15!GO:0030163;protein catabolic process;1.02593298451294e-14!GO:0006260;DNA replication;1.1688279479116e-14!GO:0008135;translation factor activity, nucleic acid binding;2.9079059067033e-14!GO:0005524;ATP binding;3.10814496927024e-14!GO:0005694;chromosome;3.39604109469199e-14!GO:0032559;adenyl ribonucleotide binding;4.97607952128233e-14!GO:0044453;nuclear membrane part;5.77971365782805e-14!GO:0030964;NADH dehydrogenase complex (quinone);1.17815463695689e-13!GO:0045271;respiratory chain complex I;1.17815463695689e-13!GO:0005747;mitochondrial respiratory chain complex I;1.17815463695689e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.37368171285753e-13!GO:0042773;ATP synthesis coupled electron transport;1.37368171285753e-13!GO:0006732;coenzyme metabolic process;1.41435680465243e-13!GO:0042254;ribosome biogenesis and assembly;1.59264100406091e-13!GO:0012501;programmed cell death;2.94468037008196e-13!GO:0009719;response to endogenous stimulus;3.04792214441183e-13!GO:0030554;adenyl nucleotide binding;3.27659392919244e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.09565839838337e-13!GO:0005794;Golgi apparatus;5.17389519665975e-13!GO:0006913;nucleocytoplasmic transport;5.18718224544928e-13!GO:0006915;apoptosis;5.38555137644425e-13!GO:0006366;transcription from RNA polymerase II promoter;5.5546914202723e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.76307258614893e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.17746024210463e-12!GO:0051169;nuclear transport;1.17944062600013e-12!GO:0000087;M phase of mitotic cell cycle;1.25556102165361e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.2736299619917e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.36999633422047e-12!GO:0000375;RNA splicing, via transesterification reactions;1.36999633422047e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.36999633422047e-12!GO:0022403;cell cycle phase;1.43893614379483e-12!GO:0007067;mitosis;1.86588004008944e-12!GO:0044427;chromosomal part;2.04811956700874e-12!GO:0005643;nuclear pore;4.5808390208918e-12!GO:0016887;ATPase activity;4.85439820451812e-12!GO:0006399;tRNA metabolic process;6.79733062861835e-12!GO:0016192;vesicle-mediated transport;6.90119060378191e-12!GO:0003712;transcription cofactor activity;6.9395991057209e-12!GO:0051301;cell division;1.06579534939059e-11!GO:0008219;cell death;1.30161020349911e-11!GO:0016265;death;1.30161020349911e-11!GO:0043412;biopolymer modification;1.55857746015276e-11!GO:0042623;ATPase activity, coupled;1.71746669985303e-11!GO:0065002;intracellular protein transport across a membrane;2.27212669090015e-11!GO:0050794;regulation of cellular process;2.80160680267134e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.51911744615299e-11!GO:0006461;protein complex assembly;4.37243232453471e-11!GO:0051726;regulation of cell cycle;4.59775954434861e-11!GO:0000074;regulation of progression through cell cycle;6.84425562630891e-11!GO:0009055;electron carrier activity;9.09259012283293e-11!GO:0005789;endoplasmic reticulum membrane;9.55002205372791e-11!GO:0003743;translation initiation factor activity;1.25148401748392e-10!GO:0050657;nucleic acid transport;1.25199750020346e-10!GO:0051236;establishment of RNA localization;1.25199750020346e-10!GO:0050658;RNA transport;1.25199750020346e-10!GO:0006403;RNA localization;1.35826933806154e-10!GO:0005793;ER-Golgi intermediate compartment;1.55298877420715e-10!GO:0008639;small protein conjugating enzyme activity;1.90106290666344e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.96036006097755e-10!GO:0006413;translational initiation;2.29378995321378e-10!GO:0006446;regulation of translational initiation;2.59229458348683e-10!GO:0016604;nuclear body;3.48292187399349e-10!GO:0006464;protein modification process;4.36416486713965e-10!GO:0004842;ubiquitin-protein ligase activity;4.37313583113895e-10!GO:0000279;M phase;4.59713092647651e-10!GO:0008565;protein transporter activity;4.90300486818378e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.18159352116079e-10!GO:0046930;pore complex;5.27867732420834e-10!GO:0051276;chromosome organization and biogenesis;6.89522726613558e-10!GO:0019787;small conjugating protein ligase activity;7.57457990409623e-10!GO:0017038;protein import;8.41062472114637e-10!GO:0009259;ribonucleotide metabolic process;1.15153166522385e-09!GO:0004386;helicase activity;1.69491319338502e-09!GO:0006163;purine nucleotide metabolic process;2.3165907549932e-09!GO:0043687;post-translational protein modification;2.3497831661608e-09!GO:0009056;catabolic process;2.58386039922388e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.10092262268875e-09!GO:0007005;mitochondrion organization and biogenesis;3.28879350290257e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.79658610769216e-09!GO:0004812;aminoacyl-tRNA ligase activity;3.79658610769216e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.79658610769216e-09!GO:0009060;aerobic respiration;4.40380930995258e-09!GO:0051188;cofactor biosynthetic process;6.35319431321096e-09!GO:0006364;rRNA processing;7.07004694321233e-09!GO:0045333;cellular respiration;8.16602721192745e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.39998431709627e-09!GO:0043038;amino acid activation;9.89817418432962e-09!GO:0006418;tRNA aminoacylation for protein translation;9.89817418432962e-09!GO:0043039;tRNA aminoacylation;9.89817418432962e-09!GO:0009150;purine ribonucleotide metabolic process;9.91196197643508e-09!GO:0051028;mRNA transport;9.99531092419362e-09!GO:0006164;purine nucleotide biosynthetic process;1.01813978463999e-08!GO:0016881;acid-amino acid ligase activity;1.0954095605393e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.0954095605393e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.10693700859503e-08!GO:0016072;rRNA metabolic process;1.26717663974429e-08!GO:0009260;ribonucleotide biosynthetic process;1.55505025445057e-08!GO:0015986;ATP synthesis coupled proton transport;1.8385779730596e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.8385779730596e-08!GO:0005839;proteasome core complex (sensu Eukaryota);2.13086752038126e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.18549275858988e-08!GO:0009199;ribonucleoside triphosphate metabolic process;2.76644200364347e-08!GO:0008026;ATP-dependent helicase activity;2.89090730136617e-08!GO:0003924;GTPase activity;3.2507703813021e-08!GO:0005667;transcription factor complex;3.48454029557904e-08!GO:0006888;ER to Golgi vesicle-mediated transport;3.59488691067842e-08!GO:0048523;negative regulation of cellular process;4.10564997745003e-08!GO:0009141;nucleoside triphosphate metabolic process;4.26366683805195e-08!GO:0005768;endosome;4.37528931809636e-08!GO:0009152;purine ribonucleotide biosynthetic process;4.37528931809636e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;4.51473911602595e-08!GO:0006261;DNA-dependent DNA replication;4.89959311698404e-08!GO:0019222;regulation of metabolic process;4.93701490732382e-08!GO:0016607;nuclear speck;5.08089596203508e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.79063823592387e-08!GO:0009144;purine nucleoside triphosphate metabolic process;5.79063823592387e-08!GO:0046034;ATP metabolic process;5.91395074581235e-08!GO:0016469;proton-transporting two-sector ATPase complex;6.40622265632002e-08!GO:0050789;regulation of biological process;6.87106919395992e-08!GO:0015078;hydrogen ion transmembrane transporter activity;7.12963418653579e-08!GO:0019829;cation-transporting ATPase activity;7.38780143530669e-08!GO:0065004;protein-DNA complex assembly;1.04212967513678e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.22250410435192e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.22250410435192e-07!GO:0006323;DNA packaging;1.28440794845885e-07!GO:0005788;endoplasmic reticulum lumen;1.55061056336665e-07!GO:0043566;structure-specific DNA binding;1.55061056336665e-07!GO:0009108;coenzyme biosynthetic process;1.67529561309695e-07!GO:0043067;regulation of programmed cell death;1.71320076237499e-07!GO:0042981;regulation of apoptosis;1.73534872653847e-07!GO:0003697;single-stranded DNA binding;1.78221413077009e-07!GO:0006099;tricarboxylic acid cycle;1.87052667786157e-07!GO:0046356;acetyl-CoA catabolic process;1.87052667786157e-07!GO:0016779;nucleotidyltransferase activity;1.87180427227499e-07!GO:0004298;threonine endopeptidase activity;1.99539701252991e-07!GO:0006754;ATP biosynthetic process;2.02161061852451e-07!GO:0006753;nucleoside phosphate metabolic process;2.02161061852451e-07!GO:0030120;vesicle coat;2.33321480367931e-07!GO:0030662;coated vesicle membrane;2.33321480367931e-07!GO:0009117;nucleotide metabolic process;2.33495615969871e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.58098713730969e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.58098713730969e-07!GO:0015630;microtubule cytoskeleton;3.03775479712771e-07!GO:0043623;cellular protein complex assembly;3.60769250642834e-07!GO:0009109;coenzyme catabolic process;3.62182508319177e-07!GO:0051187;cofactor catabolic process;4.78849177060252e-07!GO:0005525;GTP binding;4.88256085510944e-07!GO:0006084;acetyl-CoA metabolic process;4.92706684792771e-07!GO:0000314;organellar small ribosomal subunit;4.94451768425118e-07!GO:0005763;mitochondrial small ribosomal subunit;4.94451768425118e-07!GO:0032446;protein modification by small protein conjugation;5.00808136164005e-07!GO:0006752;group transfer coenzyme metabolic process;5.95824970605123e-07!GO:0048475;coated membrane;7.36203428821996e-07!GO:0030117;membrane coat;7.36203428821996e-07!GO:0051170;nuclear import;7.38666220229619e-07!GO:0016567;protein ubiquitination;7.940436495158e-07!GO:0005773;vacuole;1.08319809291252e-06!GO:0000785;chromatin;1.16462424071625e-06!GO:0006606;protein import into nucleus;1.23753273929355e-06!GO:0048519;negative regulation of biological process;1.57833457960041e-06!GO:0045259;proton-transporting ATP synthase complex;1.9646383360437e-06!GO:0043069;negative regulation of programmed cell death;2.06573738675275e-06!GO:0044431;Golgi apparatus part;2.47375522237582e-06!GO:0051246;regulation of protein metabolic process;3.59491124106758e-06!GO:0006333;chromatin assembly or disassembly;3.64273145332385e-06!GO:0043066;negative regulation of apoptosis;3.91849134216269e-06!GO:0005762;mitochondrial large ribosomal subunit;4.03623679168696e-06!GO:0000315;organellar large ribosomal subunit;4.03623679168696e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;4.34951715760023e-06!GO:0016563;transcription activator activity;4.65803807987964e-06!GO:0003713;transcription coactivator activity;5.1786455762907e-06!GO:0016787;hydrolase activity;5.46036145629673e-06!GO:0016568;chromatin modification;5.9498646946198e-06!GO:0005813;centrosome;5.9808871486299e-06!GO:0006613;cotranslational protein targeting to membrane;6.24827924387421e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.70119937493047e-06!GO:0005798;Golgi-associated vesicle;7.12884117214273e-06!GO:0031323;regulation of cellular metabolic process;7.44078166621577e-06!GO:0003714;transcription corepressor activity;7.83697454903795e-06!GO:0000323;lytic vacuole;8.0500790870985e-06!GO:0005764;lysosome;8.0500790870985e-06!GO:0005657;replication fork;8.52820127733095e-06!GO:0000245;spliceosome assembly;8.61338202277771e-06!GO:0032561;guanyl ribonucleotide binding;8.74855633268322e-06!GO:0019001;guanyl nucleotide binding;8.74855633268322e-06!GO:0016740;transferase activity;8.92631537696271e-06!GO:0005770;late endosome;9.05861914905293e-06!GO:0006916;anti-apoptosis;1.07654248637478e-05!GO:0051168;nuclear export;1.13540410307072e-05!GO:0051427;hormone receptor binding;1.16735838322858e-05!GO:0016564;transcription repressor activity;1.18430493543757e-05!GO:0051329;interphase of mitotic cell cycle;1.48161033098862e-05!GO:0005819;spindle;1.51565054190526e-05!GO:0051325;interphase;1.82952001487557e-05!GO:0006350;transcription;2.01190342276994e-05!GO:0045786;negative regulation of progression through cell cycle;2.13023014221256e-05!GO:0005815;microtubule organizing center;2.17257029236445e-05!GO:0031324;negative regulation of cellular metabolic process;2.22286087527776e-05!GO:0006839;mitochondrial transport;2.34441706455508e-05!GO:0035257;nuclear hormone receptor binding;2.48396515101413e-05!GO:0016023;cytoplasmic membrane-bound vesicle;2.56309725137889e-05!GO:0031988;membrane-bound vesicle;2.59713212840584e-05!GO:0044440;endosomal part;3.1596079744951e-05!GO:0010008;endosome membrane;3.1596079744951e-05!GO:0016491;oxidoreductase activity;3.25639550491141e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.38144450576266e-05!GO:0000151;ubiquitin ligase complex;3.43249520590259e-05!GO:0015980;energy derivation by oxidation of organic compounds;3.51313075117895e-05!GO:0031982;vesicle;4.02803485997312e-05!GO:0030867;rough endoplasmic reticulum membrane;4.20457665675957e-05!GO:0006793;phosphorus metabolic process;4.33735237265766e-05!GO:0006796;phosphate metabolic process;4.33735237265766e-05!GO:0003724;RNA helicase activity;4.78853731337837e-05!GO:0051789;response to protein stimulus;4.79924337352892e-05!GO:0006986;response to unfolded protein;4.79924337352892e-05!GO:0045454;cell redox homeostasis;4.79924337352892e-05!GO:0003899;DNA-directed RNA polymerase activity;4.93129975991272e-05!GO:0016859;cis-trans isomerase activity;5.11754147506255e-05!GO:0000775;chromosome, pericentric region;5.26419223545257e-05!GO:0031410;cytoplasmic vesicle;5.34134302987974e-05!GO:0006091;generation of precursor metabolites and energy;5.41908443193892e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.97188990107671e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;6.09464712393552e-05!GO:0043021;ribonucleoprotein binding;6.21207666610291e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.58653487862096e-05!GO:0008654;phospholipid biosynthetic process;6.58653487862096e-05!GO:0000075;cell cycle checkpoint;7.16496502791136e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.47620649585388e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000107587725144517!GO:0008033;tRNA processing;0.000108362936442998!GO:0031252;leading edge;0.000108614957426654!GO:0006612;protein targeting to membrane;0.000114524031337653!GO:0016853;isomerase activity;0.000134662937001387!GO:0000139;Golgi membrane;0.0001391768700201!GO:0010468;regulation of gene expression;0.000198970323625448!GO:0043681;protein import into mitochondrion;0.000200030353444933!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000202235570671367!GO:0004576;oligosaccharyl transferase activity;0.000215454302042418!GO:0009892;negative regulation of metabolic process;0.000222371041270039!GO:0008094;DNA-dependent ATPase activity;0.00023739210100414!GO:0006891;intra-Golgi vesicle-mediated transport;0.000245132363168555!GO:0033116;ER-Golgi intermediate compartment membrane;0.000254799750863036!GO:0008250;oligosaccharyl transferase complex;0.000256593777363735!GO:0006352;transcription initiation;0.000259327236107215!GO:0007006;mitochondrial membrane organization and biogenesis;0.000308040582708081!GO:0008361;regulation of cell size;0.000316155715990798!GO:0032774;RNA biosynthetic process;0.000316329428848595!GO:0006383;transcription from RNA polymerase III promoter;0.000322659324496855!GO:0005048;signal sequence binding;0.000335934135057117!GO:0016272;prefoldin complex;0.000354070290832762!GO:0016310;phosphorylation;0.000367933947050163!GO:0019899;enzyme binding;0.000377506988616593!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000377506988616593!GO:0006334;nucleosome assembly;0.000382404913087561!GO:0065007;biological regulation;0.000389273162514353!GO:0006351;transcription, DNA-dependent;0.000405905883648816!GO:0016049;cell growth;0.000419315177931464!GO:0048522;positive regulation of cellular process;0.000428349425668895!GO:0005885;Arp2/3 protein complex;0.000429369310727541!GO:0006626;protein targeting to mitochondrion;0.000470065901187341!GO:0007051;spindle organization and biogenesis;0.000472514010600781!GO:0009165;nucleotide biosynthetic process;0.000474807230550757!GO:0000059;protein import into nucleus, docking;0.000494569663645439!GO:0006302;double-strand break repair;0.00049717275364124!GO:0003690;double-stranded DNA binding;0.000521008847959554!GO:0046474;glycerophospholipid biosynthetic process;0.000527802515835559!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000527802515835559!GO:0006414;translational elongation;0.000527802515835559!GO:0000049;tRNA binding;0.000592930672753545!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0005953750388424!GO:0016481;negative regulation of transcription;0.000645639770721646!GO:0031497;chromatin assembly;0.000646006393989455!GO:0030663;COPI coated vesicle membrane;0.000670079699807542!GO:0030126;COPI vesicle coat;0.000670079699807542!GO:0031072;heat shock protein binding;0.000677320929918605!GO:0048471;perinuclear region of cytoplasm;0.000679917893182365!GO:0005769;early endosome;0.000693768378532536!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000703028211916275!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000715181750316984!GO:0051920;peroxiredoxin activity;0.000765663512787869!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000775737651381419!GO:0008186;RNA-dependent ATPase activity;0.000802945206149572!GO:0030133;transport vesicle;0.000860326778655756!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000877613830421894!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000882157206721511!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000882157206721511!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000882157206721511!GO:0030880;RNA polymerase complex;0.00089580021841202!GO:0048500;signal recognition particle;0.000909759917821324!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000915791401436893!GO:0030137;COPI-coated vesicle;0.000918229221642571!GO:0001558;regulation of cell growth;0.00100343895603115!GO:0005791;rough endoplasmic reticulum;0.00104539518933783!GO:0003682;chromatin binding;0.00106015686431947!GO:0016251;general RNA polymerase II transcription factor activity;0.00108013734324571!GO:0046489;phosphoinositide biosynthetic process;0.00109839541302593!GO:0046483;heterocycle metabolic process;0.00110947566277374!GO:0006611;protein export from nucleus;0.00118240553054368!GO:0005684;U2-dependent spliceosome;0.00118240553054368!GO:0007088;regulation of mitosis;0.00119561325828695!GO:0018196;peptidyl-asparagine modification;0.00121045512409321!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00121045512409321!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00124741029830459!GO:0015399;primary active transmembrane transporter activity;0.00124741029830459!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00127314569069416!GO:0006520;amino acid metabolic process;0.00128574671358836!GO:0005905;coated pit;0.00132121951998811!GO:0051087;chaperone binding;0.00134758848576461!GO:0007243;protein kinase cascade;0.00141235025403231!GO:0003729;mRNA binding;0.00154578418098843!GO:0043284;biopolymer biosynthetic process;0.00174180662945578!GO:0051052;regulation of DNA metabolic process;0.00178894380578985!GO:0016741;transferase activity, transferring one-carbon groups;0.00180529785753958!GO:0016363;nuclear matrix;0.00184014563002403!GO:0000776;kinetochore;0.00184775899853186!GO:0008168;methyltransferase activity;0.00193268592242536!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00195002829784319!GO:0000428;DNA-directed RNA polymerase complex;0.00195002829784319!GO:0008139;nuclear localization sequence binding;0.00199705595805578!GO:0006818;hydrogen transport;0.00206728658130373!GO:0006402;mRNA catabolic process;0.00211082726371938!GO:0005774;vacuolar membrane;0.00212109756320777!GO:0048487;beta-tubulin binding;0.00213830881013273!GO:0046983;protein dimerization activity;0.00214112617638778!GO:0005874;microtubule;0.00215592926697091!GO:0003702;RNA polymerase II transcription factor activity;0.00217655072992853!GO:0008312;7S RNA binding;0.00221218954793394!GO:0004004;ATP-dependent RNA helicase activity;0.00221356291435607!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00221356291435607!GO:0045047;protein targeting to ER;0.00221356291435607!GO:0015992;proton transport;0.00239979699804418!GO:0003684;damaged DNA binding;0.00257615876449373!GO:0045449;regulation of transcription;0.00260977206838209!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0026667319911047!GO:0045045;secretory pathway;0.00295664151203983!GO:0043596;nuclear replication fork;0.00300159699012351!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00303177685712429!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00303177685712429!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00303191650292514!GO:0009116;nucleoside metabolic process;0.00307118178966282!GO:0005637;nuclear inner membrane;0.00308390616216478!GO:0032508;DNA duplex unwinding;0.00322304481586108!GO:0032392;DNA geometric change;0.00322304481586108!GO:0044262;cellular carbohydrate metabolic process;0.00343738730690789!GO:0006310;DNA recombination;0.00344303080892443!GO:0030176;integral to endoplasmic reticulum membrane;0.00347812961429845!GO:0003746;translation elongation factor activity;0.00348317423319242!GO:0007050;cell cycle arrest;0.00348759090993677!GO:0016197;endosome transport;0.00350766516909382!GO:0006405;RNA export from nucleus;0.00351405873518431!GO:0007093;mitotic cell cycle checkpoint;0.00356846594760814!GO:0003678;DNA helicase activity;0.00364860019617312!GO:0019752;carboxylic acid metabolic process;0.00366766469129826!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00376801922763433!GO:0019843;rRNA binding;0.00384517070094768!GO:0022890;inorganic cation transmembrane transporter activity;0.00410354313273101!GO:0019867;outer membrane;0.00412560829214939!GO:0051540;metal cluster binding;0.0042379039971549!GO:0051536;iron-sulfur cluster binding;0.0042379039971549!GO:0000096;sulfur amino acid metabolic process;0.00423924064879996!GO:0031968;organelle outer membrane;0.00427057806952271!GO:0044452;nucleolar part;0.00429375195045277!GO:0003711;transcription elongation regulator activity;0.00449558367197302!GO:0005669;transcription factor TFIID complex;0.00449848385516632!GO:0006082;organic acid metabolic process;0.00454972089278395!GO:0030658;transport vesicle membrane;0.00457123813762541!GO:0006650;glycerophospholipid metabolic process;0.00480282343943303!GO:0046966;thyroid hormone receptor binding;0.00498427660562906!GO:0051539;4 iron, 4 sulfur cluster binding;0.00508686864495711!GO:0015631;tubulin binding;0.00510296198963757!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00516552065852116!GO:0015002;heme-copper terminal oxidase activity;0.00516552065852116!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00516552065852116!GO:0004129;cytochrome-c oxidase activity;0.00516552065852116!GO:0035258;steroid hormone receptor binding;0.00534303592649997!GO:0007010;cytoskeleton organization and biogenesis;0.00536214131232128!GO:0016044;membrane organization and biogenesis;0.00558585858595467!GO:0042802;identical protein binding;0.00562674495980294!GO:0044437;vacuolar part;0.00562935675143255!GO:0006270;DNA replication initiation;0.0056746155335861!GO:0004527;exonuclease activity;0.00568169467180331!GO:0005876;spindle microtubule;0.00581759679735986!GO:0005765;lysosomal membrane;0.00582817158885328!GO:0006401;RNA catabolic process;0.00624169745007195!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00627277292411924!GO:0007040;lysosome organization and biogenesis;0.00627969201060374!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00681856414853008!GO:0051252;regulation of RNA metabolic process;0.00690892444827943!GO:0030132;clathrin coat of coated pit;0.0075768986172845!GO:0046982;protein heterodimerization activity;0.00764787268817575!GO:0003677;DNA binding;0.00765895735109752!GO:0045893;positive regulation of transcription, DNA-dependent;0.00791289365831048!GO:0000082;G1/S transition of mitotic cell cycle;0.00793772756535004!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00811381178351772!GO:0006355;regulation of transcription, DNA-dependent;0.00819295066224009!GO:0007033;vacuole organization and biogenesis;0.00820037211479456!GO:0006268;DNA unwinding during replication;0.0082129700375306!GO:0048468;cell development;0.0082129700375306!GO:0030118;clathrin coat;0.00847338721844817!GO:0005741;mitochondrial outer membrane;0.0086877752042996!GO:0030660;Golgi-associated vesicle membrane;0.00883991871969743!GO:0007021;tubulin folding;0.00903469409834606!GO:0030134;ER to Golgi transport vesicle;0.00936844247715227!GO:0006595;polyamine metabolic process;0.00971882829171958!GO:0006892;post-Golgi vesicle-mediated transport;0.0097622376147721!GO:0009112;nucleobase metabolic process;0.00987184319610836!GO:0043022;ribosome binding;0.0099568514105632!GO:0043065;positive regulation of apoptosis;0.0101940414457136!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0102096170145257!GO:0005869;dynactin complex;0.0105553104723463!GO:0008287;protein serine/threonine phosphatase complex;0.0106724177116063!GO:0006506;GPI anchor biosynthetic process;0.010900040182014!GO:0043601;nuclear replisome;0.0109927611052572!GO:0030894;replisome;0.0109927611052572!GO:0006275;regulation of DNA replication;0.0110724973881224!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0110765957316586!GO:0040008;regulation of growth;0.0111052276136203!GO:0001726;ruffle;0.0112186509931196!GO:0031902;late endosome membrane;0.0112919898750822!GO:0051287;NAD binding;0.0113771404459099!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0115267926006191!GO:0043492;ATPase activity, coupled to movement of substances;0.0115661502736662!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0117126306887429!GO:0008180;signalosome;0.0117186341965086!GO:0031970;organelle envelope lumen;0.0117434072423523!GO:0006979;response to oxidative stress;0.012308477159523!GO:0005832;chaperonin-containing T-complex;0.0124032799578848!GO:0045892;negative regulation of transcription, DNA-dependent;0.0124087343549021!GO:0045941;positive regulation of transcription;0.012570145982856!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0129499867265305!GO:0010257;NADH dehydrogenase complex assembly;0.0129499867265305!GO:0033108;mitochondrial respiratory chain complex assembly;0.0129499867265305!GO:0043068;positive regulation of programmed cell death;0.0130344786812945!GO:0005758;mitochondrial intermembrane space;0.0130469995016872!GO:0045792;negative regulation of cell size;0.0133636909250614!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0138040029448991!GO:0006509;membrane protein ectodomain proteolysis;0.0141852892028282!GO:0033619;membrane protein proteolysis;0.0141852892028282!GO:0030308;negative regulation of cell growth;0.0145385287495134!GO:0030127;COPII vesicle coat;0.0145385287495134!GO:0012507;ER to Golgi transport vesicle membrane;0.0145385287495134!GO:0043624;cellular protein complex disassembly;0.0145385287495134!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0151021991761367!GO:0006505;GPI anchor metabolic process;0.0151021991761367!GO:0006497;protein amino acid lipidation;0.0154383107125502!GO:0006284;base-excision repair;0.0155161918369565!GO:0051059;NF-kappaB binding;0.0156230597707556!GO:0006984;ER-nuclear signaling pathway;0.0162813194729335!GO:0017166;vinculin binding;0.0163484931491492!GO:0032984;macromolecular complex disassembly;0.0165603561116376!GO:0046467;membrane lipid biosynthetic process;0.0168645097370353!GO:0007052;mitotic spindle organization and biogenesis;0.0171695884003959!GO:0030384;phosphoinositide metabolic process;0.0176412243025659!GO:0030036;actin cytoskeleton organization and biogenesis;0.0177923549858086!GO:0003923;GPI-anchor transamidase activity;0.0178223815488339!GO:0016255;attachment of GPI anchor to protein;0.0178223815488339!GO:0042765;GPI-anchor transamidase complex;0.0178223815488339!GO:0008601;protein phosphatase type 2A regulator activity;0.0187718058479957!GO:0030521;androgen receptor signaling pathway;0.0188603912019609!GO:0042158;lipoprotein biosynthetic process;0.0191692163382983!GO:0008092;cytoskeletal protein binding;0.0192580196183131!GO:0016584;nucleosome positioning;0.0194896296870183!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0195672715833705!GO:0006519;amino acid and derivative metabolic process;0.0195672715833705!GO:0004674;protein serine/threonine kinase activity;0.0201305062086476!GO:0031124;mRNA 3'-end processing;0.0201923329968873!GO:0043488;regulation of mRNA stability;0.0201923329968873!GO:0043487;regulation of RNA stability;0.0201923329968873!GO:0006378;mRNA polyadenylation;0.0206514570883456!GO:0000178;exosome (RNase complex);0.0206810611608955!GO:0006144;purine base metabolic process;0.0207586791035089!GO:0004518;nuclease activity;0.0207586791035089!GO:0042770;DNA damage response, signal transduction;0.0211379230838597!GO:0050811;GABA receptor binding;0.021257439558506!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0213832458402326!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0213891716276694!GO:0008632;apoptotic program;0.0220558034088082!GO:0006607;NLS-bearing substrate import into nucleus;0.0222310413773639!GO:0006289;nucleotide-excision repair;0.0224138579181333!GO:0008538;proteasome activator activity;0.0226615346945886!GO:0030659;cytoplasmic vesicle membrane;0.0226615346945886!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0233507763136439!GO:0032940;secretion by cell;0.0233578134043084!GO:0000287;magnesium ion binding;0.0238550354466984!GO:0004448;isocitrate dehydrogenase activity;0.0239083313729226!GO:0000792;heterochromatin;0.0241717744948854!GO:0022411;cellular component disassembly;0.0243727666381282!GO:0016407;acetyltransferase activity;0.024437111314923!GO:0043241;protein complex disassembly;0.0248457465376608!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0254422076368466!GO:0047485;protein N-terminus binding;0.0262051421492579!GO:0007059;chromosome segregation;0.0262204805476158!GO:0031418;L-ascorbic acid binding;0.026369120898293!GO:0000159;protein phosphatase type 2A complex;0.0266078433320759!GO:0030125;clathrin vesicle coat;0.0268041843665089!GO:0030665;clathrin coated vesicle membrane;0.0268041843665089!GO:0000086;G2/M transition of mitotic cell cycle;0.0269024025442686!GO:0046979;TAP2 binding;0.0269152560280918!GO:0046977;TAP binding;0.0269152560280918!GO:0046978;TAP1 binding;0.0269152560280918!GO:0019783;small conjugating protein-specific protease activity;0.0270755080054054!GO:0003756;protein disulfide isomerase activity;0.0271285809065296!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0271285809065296!GO:0006950;response to stress;0.0273231286633187!GO:0032507;maintenance of cellular protein localization;0.027649775245919!GO:0032200;telomere organization and biogenesis;0.027840747507047!GO:0000723;telomere maintenance;0.027840747507047!GO:0065009;regulation of a molecular function;0.02804457818442!GO:0016791;phosphoric monoester hydrolase activity;0.0280472642825188!GO:0030518;steroid hormone receptor signaling pathway;0.0283056504882577!GO:0008637;apoptotic mitochondrial changes;0.0283587399556734!GO:0008234;cysteine-type peptidase activity;0.0289613956253695!GO:0051101;regulation of DNA binding;0.029451518749183!GO:0031529;ruffle organization and biogenesis;0.0296278659591359!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0300716618559274!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0301886426845247!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0308620265185501!GO:0045039;protein import into mitochondrial inner membrane;0.0308620265185501!GO:0007034;vacuolar transport;0.0309506344699425!GO:0004843;ubiquitin-specific protease activity;0.0312074555292224!GO:0000910;cytokinesis;0.0314788199972307!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0314788199972307!GO:0030508;thiol-disulfide exchange intermediate activity;0.0318709275883776!GO:0000228;nuclear chromosome;0.0319293986029367!GO:0006807;nitrogen compound metabolic process;0.0319351947742758!GO:0008022;protein C-terminus binding;0.0341462131644351!GO:0000209;protein polyubiquitination;0.0348064873548703!GO:0045926;negative regulation of growth;0.0348728769321017!GO:0008408;3'-5' exonuclease activity;0.0349904377549778!GO:0004532;exoribonuclease activity;0.0350264697556929!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0350264697556929!GO:0050662;coenzyme binding;0.0353597217987525!GO:0046519;sphingoid metabolic process;0.0354586816649942!GO:0031901;early endosome membrane;0.0357801826261201!GO:0008652;amino acid biosynthetic process;0.0359816438792421!GO:0016790;thiolester hydrolase activity;0.0360633179813935!GO:0009308;amine metabolic process;0.0361743206477777!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0361743206477777!GO:0031625;ubiquitin protein ligase binding;0.0363248892355466!GO:0006564;L-serine biosynthetic process;0.0363537557057616!GO:0008320;protein transmembrane transporter activity;0.0365324190714046!GO:0048518;positive regulation of biological process;0.0368502708641179!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0371314110485473!GO:0030119;AP-type membrane coat adaptor complex;0.0373291354270538!GO:0045936;negative regulation of phosphate metabolic process;0.0373383945523873!GO:0006672;ceramide metabolic process;0.0374756134031786!GO:0005862;muscle thin filament tropomyosin;0.0375050825529843!GO:0006338;chromatin remodeling;0.0377328646477881!GO:0000922;spindle pole;0.0377389840384389!GO:0042393;histone binding;0.0377389840384389!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0377389840384389!GO:0043189;H4/H2A histone acetyltransferase complex;0.0378352827156418!GO:0008536;Ran GTPase binding;0.03784386448149!GO:0004185;serine carboxypeptidase activity;0.0380018710463973!GO:0030503;regulation of cell redox homeostasis;0.0380504343093738!GO:0051098;regulation of binding;0.0382022955996586!GO:0007017;microtubule-based process;0.039015363839282!GO:0006376;mRNA splice site selection;0.0392152721670736!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0392152721670736!GO:0046822;regulation of nucleocytoplasmic transport;0.0392306656773556!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0393449013999824!GO:0006740;NADPH regeneration;0.0395835643537496!GO:0006098;pentose-phosphate shunt;0.0395835643537496!GO:0050681;androgen receptor binding;0.0401845777138537!GO:0017134;fibroblast growth factor binding;0.0402741618825051!GO:0045185;maintenance of protein localization;0.0415056108021966!GO:0031628;opioid receptor binding;0.0415056108021966!GO:0031852;mu-type opioid receptor binding;0.0415056108021966!GO:0009451;RNA modification;0.0415283361468461!GO:0043130;ubiquitin binding;0.042891693634718!GO:0032182;small conjugating protein binding;0.042891693634718!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0439170265814264!GO:0044433;cytoplasmic vesicle part;0.0440427602006925!GO:0019206;nucleoside kinase activity;0.0441969222016285!GO:0007030;Golgi organization and biogenesis;0.0441969222016285!GO:0009066;aspartate family amino acid metabolic process;0.0443232741496545!GO:0030140;trans-Golgi network transport vesicle;0.0446132854203115!GO:0004722;protein serine/threonine phosphatase activity;0.0446132854203115!GO:0006778;porphyrin metabolic process;0.0446132854203115!GO:0033013;tetrapyrrole metabolic process;0.0446132854203115!GO:0050178;phenylpyruvate tautomerase activity;0.0446689431193344!GO:0004221;ubiquitin thiolesterase activity;0.0457018405059701!GO:0046128;purine ribonucleoside metabolic process;0.0457879975020948!GO:0042278;purine nucleoside metabolic process;0.0457879975020948!GO:0030496;midbody;0.0462891389613793!GO:0045736;negative regulation of cyclin-dependent protein kinase activity;0.0462891389613793!GO:0006007;glucose catabolic process;0.0462891389613793!GO:0033673;negative regulation of kinase activity;0.0469366988065541!GO:0006469;negative regulation of protein kinase activity;0.0469366988065541!GO:0031570;DNA integrity checkpoint;0.0471974278877319!GO:0005663;DNA replication factor C complex;0.0471974278877319!GO:0000123;histone acetyltransferase complex;0.0471974278877319!GO:0005583;fibrillar collagen;0.0476189271516856!GO:0009119;ribonucleoside metabolic process;0.0481545821493472!GO:0005784;translocon complex;0.0481545821493472!GO:0004192;cathepsin D activity;0.0484541805636943!GO:0030433;ER-associated protein catabolic process;0.0491761688384565!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0491761688384565!GO:0000786;nucleosome;0.0495574490374818!GO:0051651;maintenance of cellular localization;0.0495798844482502!GO:0030911;TPR domain binding;0.0497565943511985 | |||
|sample_id=10689 | |sample_id=10689 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=endometrium | |sample_tissue=endometrium | ||
|top_motifs=AIRE:2.46406381048;TEF:2.22460480677;UFEwm:1.98645623338;ZBTB16:1.76116802501;EVI1:1.72999033084;RXR{A,B,G}:1.45336756001;HMGA1,2:1.45281619548;ZNF384:1.42207990556;FOXD3:1.39944911757;NKX3-1:1.38775652914;PAX4:1.2842688278;NR6A1:1.22232657954;IKZF2:1.18616498846;FOXL1:1.1331056798;POU1F1:1.13149075159;LHX3,4:1.04675766946;CDX1,2,4:0.894956105088;HOX{A4,D4}:0.884944399121;EN1,2:0.866985625026;IKZF1:0.808925620439;ONECUT1,2:0.768334049408;HOXA9_MEIS1:0.766086069903;RBPJ:0.751094815584;NKX2-2,8:0.724431336523;FOXP1:0.690023625308;IRF1,2:0.65965250967;NKX6-1,2:0.635178995677;ALX4:0.628911313958;PITX1..3:0.605431513478;bHLH_family:0.571914001666;TAL1_TCF{3,4,12}:0.541934054781;FOXP3:0.529681338711;NR5A1,2:0.506318291632;NKX2-1,4:0.469443922051;NFE2L1:0.433305903628;NFIX:0.420192720073;CDC5L:0.418391410253;NKX3-2:0.41736239108;E2F1..5:0.405151700389;SRF:0.396065535521;POU6F1:0.387054887244;TOPORS:0.377629713289;HIF1A:0.360409785464;POU3F1..4:0.339312812687;ARID5B:0.323558495467;NR3C1:0.320297548042;NFY{A,B,C}:0.319851637384;ELK1,4_GABP{A,B1}:0.297426980291;ZNF423:0.254994562744;IRF7:0.243897856389;ZNF143:0.241710384569;ZIC1..3:0.238065613427;RORA:0.215883959316;LMO2:0.198099253101;MAFB:0.182799839349;TBX4,5:0.167698243205;OCT4_SOX2{dimer}:0.162078952884;GATA4:0.159954824652;NKX2-3_NKX2-5:0.155852642715;ATF4:0.146980360645;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.145484024397;ESR1:0.13087381337;NANOG{mouse}:0.127175021988;NFE2L2:0.122280224887;HOX{A6,A7,B6,B7}:0.118580602967;HLF:0.118047152853;PAX3,7:0.116834630166;HBP1_HMGB_SSRP1_UBTF:0.0899524444475;GFI1B:0.0784544440672;STAT2,4,6:0.0752843695607;PAX8:0.0660644474241;POU5F1:0.0599642186543;ALX1:0.0580545351368;TFAP4:0.0457689190643;ZBTB6:0.0453737326406;NRF1:0.0443176704895;DMAP1_NCOR{1,2}_SMARC:0.0116198358763;MYB:0.0062401738708;RXRA_VDR{dimer}:0.00558849504161;GLI1..3:-0.0106152279139;T:-0.0480866779902;TFDP1:-0.0529209941613;PRDM1:-0.0783833175326;SREBF1,2:-0.0863296063045;HES1:-0.0955932641085;TEAD1:-0.104920519289;CEBPA,B_DDIT3:-0.118582047609;REST:-0.12233448379;MTE{core}:-0.126613222528;BREu{core}:-0.130591310667;HOX{A5,B5}:-0.138435853869;GFI1:-0.170974791206;TLX1..3_NFIC{dimer}:-0.177433261736;NFKB1_REL_RELA:-0.180381805528;MYOD1:-0.204025349449;XBP1:-0.204260588849;YY1:-0.207647939397;MYBL2:-0.211865860533;RFX1:-0.214431902944;SOX17:-0.217573270161;KLF4:-0.221657921178;TFAP2B:-0.230104244276;FOXQ1:-0.238052652805;PPARG:-0.268339109671;HSF1,2:-0.275161527928;PAX5:-0.275402755976;RREB1:-0.278009820263;HIC1:-0.285559691681;TP53:-0.305637476114;HNF1A:-0.309990945502;ADNP_IRX_SIX_ZHX:-0.327361974446;SNAI1..3:-0.327845747692;DBP:-0.331077773647;CUX2:-0.331867487509;ZFP161:-0.337585994631;GTF2A1,2:-0.3433879753;PDX1:-0.347051000476;GTF2I:-0.348011633391;BACH2:-0.356696319931;VSX1,2:-0.358947483306;FOXO1,3,4:-0.365663469959;STAT1,3:-0.380865618417;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.395891580213;ATF6:-0.400874485912;ATF5_CREB3:-0.410322878312;STAT5{A,B}:-0.414080461938;HNF4A_NR2F1,2:-0.421498744843;ESRRA:-0.429567934063;RUNX1..3:-0.443033675813;POU2F1..3:-0.446856741455;PRRX1,2:-0.457795724305;MZF1:-0.463901170652;FOX{F1,F2,J1}:-0.466081530823;AHR_ARNT_ARNT2:-0.468234733411;PBX1:-0.472166707892;TFAP2{A,C}:-0.49517613582;MTF1:-0.512028232081;GCM1,2:-0.513257130325;FOSL2:-0.513302426834;SPIB:-0.52406077264;NFE2:-0.532765864128;PAX2:-0.539602375949;EBF1:-0.543486649284;MYFfamily:-0.549914166436;FOXA2:-0.559322579602;PAX1,9:-0.561413192105;FOS_FOS{B,L1}_JUN{B,D}:-0.562907748685;CREB1:-0.573621365127;SP1:-0.585955300608;TFCP2:-0.586512567914;CRX:-0.602262746801;NR1H4:-0.609972588023;FOXM1:-0.624242387224;SOX5:-0.626988692226;SPI1:-0.627129689282;PATZ1:-0.663346228821;NFIL3:-0.668833606506;GZF1:-0.678418479403;FOXN1:-0.681377103991;JUN:-0.707980858869;XCPE1{core}:-0.714150511862;BPTF:-0.727500685633;TBP:-0.753377903661;ZNF238:-0.755160936703;MEF2{A,B,C,D}:-0.776367946438;EGR1..3:-0.783814312627;PAX6:-0.790403515638;ATF2:-0.822560037802;MED-1{core}:-0.834189597798;GATA6:-0.835061201513;ELF1,2,4:-0.836197496799;SOX{8,9,10}:-0.859620325301;SMAD1..7,9:-0.897036248018;ZEB1:-0.921914155527;FOX{D1,D2}:-0.922912331323;ETS1,2:-0.926735427882;NHLH1,2:-0.941603848846;NFATC1..3:-1.04553514112;EP300:-1.05337756688;TLX2:-1.08220769818;RFX2..5_RFXANK_RFXAP:-1.08317508452;HAND1,2:-1.08668889592;SOX2:-1.09941941035;MAZ:-1.10204059978;LEF1_TCF7_TCF7L1,2:-1.11823732697;AR:-1.26993885706;HMX1:-1.28529990808;FOX{I1,J2}:-1.29684993325;TGIF1:-1.33297097664;ZNF148:-1.36910424184;SPZ1:-1.38137398549;NANOG:-1.54880376493 | |top_motifs=AIRE:2.46406381048;TEF:2.22460480677;UFEwm:1.98645623338;ZBTB16:1.76116802501;EVI1:1.72999033084;RXR{A,B,G}:1.45336756001;HMGA1,2:1.45281619548;ZNF384:1.42207990556;FOXD3:1.39944911757;NKX3-1:1.38775652914;PAX4:1.2842688278;NR6A1:1.22232657954;IKZF2:1.18616498846;FOXL1:1.1331056798;POU1F1:1.13149075159;LHX3,4:1.04675766946;CDX1,2,4:0.894956105088;HOX{A4,D4}:0.884944399121;EN1,2:0.866985625026;IKZF1:0.808925620439;ONECUT1,2:0.768334049408;HOXA9_MEIS1:0.766086069903;RBPJ:0.751094815584;NKX2-2,8:0.724431336523;FOXP1:0.690023625308;IRF1,2:0.65965250967;NKX6-1,2:0.635178995677;ALX4:0.628911313958;PITX1..3:0.605431513478;bHLH_family:0.571914001666;TAL1_TCF{3,4,12}:0.541934054781;FOXP3:0.529681338711;NR5A1,2:0.506318291632;NKX2-1,4:0.469443922051;NFE2L1:0.433305903628;NFIX:0.420192720073;CDC5L:0.418391410253;NKX3-2:0.41736239108;E2F1..5:0.405151700389;SRF:0.396065535521;POU6F1:0.387054887244;TOPORS:0.377629713289;HIF1A:0.360409785464;POU3F1..4:0.339312812687;ARID5B:0.323558495467;NR3C1:0.320297548042;NFY{A,B,C}:0.319851637384;ELK1,4_GABP{A,B1}:0.297426980291;ZNF423:0.254994562744;IRF7:0.243897856389;ZNF143:0.241710384569;ZIC1..3:0.238065613427;RORA:0.215883959316;LMO2:0.198099253101;MAFB:0.182799839349;TBX4,5:0.167698243205;OCT4_SOX2{dimer}:0.162078952884;GATA4:0.159954824652;NKX2-3_NKX2-5:0.155852642715;ATF4:0.146980360645;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.145484024397;ESR1:0.13087381337;NANOG{mouse}:0.127175021988;NFE2L2:0.122280224887;HOX{A6,A7,B6,B7}:0.118580602967;HLF:0.118047152853;PAX3,7:0.116834630166;HBP1_HMGB_SSRP1_UBTF:0.0899524444475;GFI1B:0.0784544440672;STAT2,4,6:0.0752843695607;PAX8:0.0660644474241;POU5F1:0.0599642186543;ALX1:0.0580545351368;TFAP4:0.0457689190643;ZBTB6:0.0453737326406;NRF1:0.0443176704895;DMAP1_NCOR{1,2}_SMARC:0.0116198358763;MYB:0.0062401738708;RXRA_VDR{dimer}:0.00558849504161;GLI1..3:-0.0106152279139;T:-0.0480866779902;TFDP1:-0.0529209941613;PRDM1:-0.0783833175326;SREBF1,2:-0.0863296063045;HES1:-0.0955932641085;TEAD1:-0.104920519289;CEBPA,B_DDIT3:-0.118582047609;REST:-0.12233448379;MTE{core}:-0.126613222528;BREu{core}:-0.130591310667;HOX{A5,B5}:-0.138435853869;GFI1:-0.170974791206;TLX1..3_NFIC{dimer}:-0.177433261736;NFKB1_REL_RELA:-0.180381805528;MYOD1:-0.204025349449;XBP1:-0.204260588849;YY1:-0.207647939397;MYBL2:-0.211865860533;RFX1:-0.214431902944;SOX17:-0.217573270161;KLF4:-0.221657921178;TFAP2B:-0.230104244276;FOXQ1:-0.238052652805;PPARG:-0.268339109671;HSF1,2:-0.275161527928;PAX5:-0.275402755976;RREB1:-0.278009820263;HIC1:-0.285559691681;TP53:-0.305637476114;HNF1A:-0.309990945502;ADNP_IRX_SIX_ZHX:-0.327361974446;SNAI1..3:-0.327845747692;DBP:-0.331077773647;CUX2:-0.331867487509;ZFP161:-0.337585994631;GTF2A1,2:-0.3433879753;PDX1:-0.347051000476;GTF2I:-0.348011633391;BACH2:-0.356696319931;VSX1,2:-0.358947483306;FOXO1,3,4:-0.365663469959;STAT1,3:-0.380865618417;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.395891580213;ATF6:-0.400874485912;ATF5_CREB3:-0.410322878312;STAT5{A,B}:-0.414080461938;HNF4A_NR2F1,2:-0.421498744843;ESRRA:-0.429567934063;RUNX1..3:-0.443033675813;POU2F1..3:-0.446856741455;PRRX1,2:-0.457795724305;MZF1:-0.463901170652;FOX{F1,F2,J1}:-0.466081530823;AHR_ARNT_ARNT2:-0.468234733411;PBX1:-0.472166707892;TFAP2{A,C}:-0.49517613582;MTF1:-0.512028232081;GCM1,2:-0.513257130325;FOSL2:-0.513302426834;SPIB:-0.52406077264;NFE2:-0.532765864128;PAX2:-0.539602375949;EBF1:-0.543486649284;MYFfamily:-0.549914166436;FOXA2:-0.559322579602;PAX1,9:-0.561413192105;FOS_FOS{B,L1}_JUN{B,D}:-0.562907748685;CREB1:-0.573621365127;SP1:-0.585955300608;TFCP2:-0.586512567914;CRX:-0.602262746801;NR1H4:-0.609972588023;FOXM1:-0.624242387224;SOX5:-0.626988692226;SPI1:-0.627129689282;PATZ1:-0.663346228821;NFIL3:-0.668833606506;GZF1:-0.678418479403;FOXN1:-0.681377103991;JUN:-0.707980858869;XCPE1{core}:-0.714150511862;BPTF:-0.727500685633;TBP:-0.753377903661;ZNF238:-0.755160936703;MEF2{A,B,C,D}:-0.776367946438;EGR1..3:-0.783814312627;PAX6:-0.790403515638;ATF2:-0.822560037802;MED-1{core}:-0.834189597798;GATA6:-0.835061201513;ELF1,2,4:-0.836197496799;SOX{8,9,10}:-0.859620325301;SMAD1..7,9:-0.897036248018;ZEB1:-0.921914155527;FOX{D1,D2}:-0.922912331323;ETS1,2:-0.926735427882;NHLH1,2:-0.941603848846;NFATC1..3:-1.04553514112;EP300:-1.05337756688;TLX2:-1.08220769818;RFX2..5_RFXANK_RFXAP:-1.08317508452;HAND1,2:-1.08668889592;SOX2:-1.09941941035;MAZ:-1.10204059978;LEF1_TCF7_TCF7L1,2:-1.11823732697;AR:-1.26993885706;HMX1:-1.28529990808;FOX{I1,J2}:-1.29684993325;TGIF1:-1.33297097664;ZNF148:-1.36910424184;SPZ1:-1.38137398549;NANOG:-1.54880376493 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10689-109F5;search_select_hide=table117:FF:10689-109F5 | |||
}} | }} | ||
Latest revision as of 14:33, 3 June 2020
| Name: | mixed mullerian tumor cell line:HTMMT |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11944 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11944
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11944
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0625 |
| 10 | 10 | 0.0277 |
| 100 | 100 | 0.0176 |
| 101 | 101 | 0.784 |
| 102 | 102 | 0.75 |
| 103 | 103 | 0.291 |
| 104 | 104 | 0.998 |
| 105 | 105 | 0.00869 |
| 106 | 106 | 0.746 |
| 107 | 107 | 0.0568 |
| 108 | 108 | 0.2 |
| 109 | 109 | 0.242 |
| 11 | 11 | 0.266 |
| 110 | 110 | 0.176 |
| 111 | 111 | 0.00854 |
| 112 | 112 | 0.98 |
| 113 | 113 | 0.0078 |
| 114 | 114 | 0.0977 |
| 115 | 115 | 0.0092 |
| 116 | 116 | 0.146 |
| 117 | 117 | 0.0314 |
| 118 | 118 | 0.367 |
| 119 | 119 | 0.327 |
| 12 | 12 | 0.201 |
| 120 | 120 | 0.512 |
| 121 | 121 | 0.324 |
| 122 | 122 | 0.142 |
| 123 | 123 | 0.141 |
| 124 | 124 | 0.453 |
| 125 | 125 | 0.298 |
| 126 | 126 | 0.718 |
| 127 | 127 | 0.929 |
| 128 | 128 | 0.725 |
| 129 | 129 | 0.666 |
| 13 | 13 | 0.0235 |
| 130 | 130 | 0.0731 |
| 131 | 131 | 0.643 |
| 132 | 132 | 0.757 |
| 133 | 133 | 0.0674 |
| 134 | 134 | 0.165 |
| 135 | 135 | 0.0225 |
| 136 | 136 | 0.0756 |
| 137 | 137 | 0.188 |
| 138 | 138 | 0.939 |
| 139 | 139 | 0.991 |
| 14 | 14 | 0.407 |
| 140 | 140 | 0.619 |
| 141 | 141 | 0.18 |
| 142 | 142 | 0.705 |
| 143 | 143 | 0.514 |
| 144 | 144 | 0.927 |
| 145 | 145 | 0.624 |
| 146 | 146 | 0.742 |
| 147 | 147 | 0.131 |
| 148 | 148 | 0.706 |
| 149 | 149 | 0.688 |
| 15 | 15 | 0.247 |
| 150 | 150 | 0.0569 |
| 151 | 151 | 0.978 |
| 152 | 152 | 0.258 |
| 153 | 153 | 0.38 |
| 154 | 154 | 0.689 |
| 155 | 155 | 0.617 |
| 156 | 156 | 0.858 |
| 157 | 157 | 0.419 |
| 158 | 158 | 0.0722 |
| 159 | 159 | 0.225 |
| 16 | 16 | 0.0792 |
| 160 | 160 | 0.743 |
| 161 | 161 | 0.644 |
| 162 | 162 | 0.0711 |
| 163 | 163 | 0.71 |
| 164 | 164 | 0.0705 |
| 165 | 165 | 0.712 |
| 166 | 166 | 0.349 |
| 167 | 167 | 0.0359 |
| 168 | 168 | 0.121 |
| 169 | 169 | 0.821 |
| 17 | 17 | 0.877 |
| 18 | 18 | 0.128 |
| 19 | 19 | 0.135 |
| 2 | 2 | 0.226 |
| 20 | 20 | 0.144 |
| 21 | 21 | 0.144 |
| 22 | 22 | 0.455 |
| 23 | 23 | 0.644 |
| 24 | 24 | 0.946 |
| 25 | 25 | 0.588 |
| 26 | 26 | 0.0923 |
| 27 | 27 | 0.482 |
| 28 | 28 | 0.85 |
| 29 | 29 | 0.0645 |
| 3 | 3 | 0.445 |
| 30 | 30 | 0.209 |
| 31 | 31 | 0.531 |
| 32 | 32 | 6.14773e-7 |
| 33 | 33 | 0.082 |
| 34 | 34 | 0.45 |
| 35 | 35 | 0.121 |
| 36 | 36 | 0.265 |
| 37 | 37 | 0.0514 |
| 38 | 38 | 0.953 |
| 39 | 39 | 0.728 |
| 4 | 4 | 0.755 |
| 40 | 40 | 0.199 |
| 41 | 41 | 0.242 |
| 42 | 42 | 0.942 |
| 43 | 43 | 0.401 |
| 44 | 44 | 0.0976 |
| 45 | 45 | 0.142 |
| 46 | 46 | 0.242 |
| 47 | 47 | 0.102 |
| 48 | 48 | 0.215 |
| 49 | 49 | 0.584 |
| 5 | 5 | 0.944 |
| 50 | 50 | 0.862 |
| 51 | 51 | 0.8 |
| 52 | 52 | 0.57 |
| 53 | 53 | 0.314 |
| 54 | 54 | 0.76 |
| 55 | 55 | 0.278 |
| 56 | 56 | 0.596 |
| 57 | 57 | 0.223 |
| 58 | 58 | 0.469 |
| 59 | 59 | 0.665 |
| 6 | 6 | 0.437 |
| 60 | 60 | 0.749 |
| 61 | 61 | 0.255 |
| 62 | 62 | 0.886 |
| 63 | 63 | 0.281 |
| 64 | 64 | 0.217 |
| 65 | 65 | 0.771 |
| 66 | 66 | 0.569 |
| 67 | 67 | 0.224 |
| 68 | 68 | 0.806 |
| 69 | 69 | 0.365 |
| 7 | 7 | 0.971 |
| 70 | 70 | 0.37 |
| 71 | 71 | 0.0433 |
| 72 | 72 | 0.81 |
| 73 | 73 | 0.363 |
| 74 | 74 | 0.549 |
| 75 | 75 | 0.024 |
| 76 | 76 | 0.294 |
| 77 | 77 | 0.457 |
| 78 | 78 | 0.52 |
| 79 | 79 | 0.0979 |
| 8 | 8 | 0.0874 |
| 80 | 80 | 0.00905 |
| 81 | 81 | 0.299 |
| 82 | 82 | 0.845 |
| 83 | 83 | 0.858 |
| 84 | 84 | 0.817 |
| 85 | 85 | 0.709 |
| 86 | 86 | 0.775 |
| 87 | 87 | 0.0127 |
| 88 | 88 | 0.899 |
| 89 | 89 | 0.796 |
| 9 | 9 | 0.138 |
| 90 | 90 | 0.125 |
| 91 | 91 | 0.95 |
| 92 | 92 | 0.927 |
| 93 | 93 | 0.785 |
| 94 | 94 | 0.665 |
| 95 | 95 | 0.283 |
| 96 | 96 | 0.552 |
| 97 | 97 | 0.874 |
| 98 | 98 | 0.965 |
| 99 | 99 | 0.28 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11944
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
DOID:4236 carcinosarcoma
EFO:0002091 biological replicate
FF:0000003 cell line sample
FF:0000210 human sample
UBERON:0003134 female reproductive organ
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
154 (mixed cell type cancer)
4236 (carcinosarcoma)
UBERON: Anatomy
0000468 (multi-cellular organism)
0003134 (female reproductive organ)
0005156 (reproductive structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)
