FFCP PHASE1:Mm9::chr11:33478969..33478983,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216643 | |EntrezGene=216643 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1563 | |||
|TSSclassifier=NA | |||
|UniProt=A8Y5I7 | |UniProt=A8Y5I7 | ||
|association_with_transcript=-10bp_to_ENSMUST00000135350_5end | |association_with_transcript=-10bp_to_ENSMUST00000135350_5end | ||
|cluster_id=chr11:33478969..33478983,- | |||
|description=CAGE_peak_2_at_Gabrp_5end | |description=CAGE_peak_2_at_Gabrp_5end | ||
|id=chr11:33478969..33478983,- | |id=chr11:33478969..33478983,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.11e-07,3;CL:0002202,1.11e-07,3;CL:0000069,1.11e-07,3;CL:0002632,1.11e-07,3;CL:0002368,1.11e-07,3;CL:0000307,1.11e-07,3;CL:0000377,1.11e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000474!9.81e-09!9;UBERON:0003100!5.87e-08!11;UBERON:0003134!7.87e-08!8;UBERON:0005178!2.66e-07!17;UBERON:0005181!2.66e-07!17;UBERON:0002224!2.66e-07!17;UBERON:0000915!2.66e-07!17;UBERON:0008947!2.66e-07!17;UBERON:0003258!2.66e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.03e-15,17;UBERON:0005181,2.03e-15,17;UBERON:0002224,2.03e-15,17;UBERON:0000915,2.03e-15,17;UBERON:0008947,2.03e-15,17;UBERON:0003258,2.03e-15,17;UBERON:0000474,6.01e-15,9;UBERON:0003134,6.40e-13,8;UBERON:0003100,6.24e-12,11;UBERON:0003102,9.31e-11,22;UBERON:0000014,2.58e-10,5;UBERON:0001003,2.58e-10,5;UBERON:0002097,2.58e-10,5;UBERON:0002199,2.58e-10,5;UBERON:0007029,2.58e-10,5;UBERON:0007376,2.58e-10,5;UBERON:0002416,2.58e-10,5;UBERON:0007383,2.58e-10,5;UBERON:0002048,3.12e-10,14;UBERON:0000117,3.12e-10,14;UBERON:0000171,3.12e-10,14;UBERON:0000170,3.12e-10,14;UBERON:0005597,3.12e-10,14;UBERON:0000118,3.12e-10,14;UBERON:0002102,1.87e-09,7;UBERON:0004710,1.87e-09,7;UBERON:0005419,1.87e-09,7;UBERON:0005417,1.87e-09,7;UBERON:0005729,1.87e-09,7;UBERON:0010708,3.50e-08,8;UBERON:0005153,4.09e-08,17;UBERON:0003975,7.01e-08,5;UBERON:0003126,1.11e-07,3;UBERON:0001005,1.11e-07,3;UBERON:0007196,1.11e-07,3;UBERON:0001558,1.11e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,3.83981814704176,2.2940928106717,0,0,0.215471232685889,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,12.5564803786504,10.387754484479,13.1436355703844,0.5709193985953,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0.210441855886474,0.780722657776222,0.229902104433473,0.540186389416048,0.150704817835715,0.272145996605311,0.2562274405697,0.0937017245597288,0.517406741478031,0.646703978798527,2.08016688184601,2.63926686245923,1.97276159184817,1.66828349535359,1.39300866608867,1.64625709126355,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0,0.528901133327089,0.213288250535234,1.16118335930219,0.77320476793256,0,0,0.190225626112559,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0.203651327845314,0.775809948670503,0.210407459670956,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0.449724224769707,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0,8.31389355749721,0,0,0,0,0.335012514883631,1.19021820443007,1.75620283072019,2.52216230569906,2.6575762757853,1.11618338060241,3.93271955317771,4.48980952851328,6.79850575333104,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6968616189571,1.42452482933804,4.23506094319298,13.1976098378028,0,0,0.302323556964751,0.377210159511796,2.06711325016541,1.22974059177571,0.516856586336442,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,1.03135543248187,0,0.18006109403131,0,0,0,0,0,0,0.704015124191131,8.26145076368899,0.441056796109924,5.44124634706884,1.61464426695906,1.80938774784468,3.22305328808468,5.0883678920969,0,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0.218362563746178,0.404593039154462,0.247960367176008,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,16.7037403151552,18.4983140509938,17.1494703263253,26.5833215138743,0,0,0,0,0,0,0,0,0,0,0.726511433089237,1.59609949360412,1.36586884603307,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0,0,0.715308569841963,0.436039249896986,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.999242311751784,0.701794825336225,0.429742108096597,0.191288332068843,0.882365676478062,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,3.83981814704176,2.2940928106717,0,0,0.215471232685889,0,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,12.5564803786504,10.387754484479,13.1436355703844,0.5709193985953,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0.210441855886474,0.780722657776222,0.229902104433473,0.540186389416048,0.150704817835715,0.272145996605311,0.2562274405697,0.0937017245597288,0.517406741478031,0.646703978798527,2.08016688184601,2.63926686245923,1.97276159184817,1.66828349535359,1.39300866608867,1.64625709126355,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0,0.528901133327089,0.213288250535234,1.16118335930219,0.77320476793256,0,0,0.190225626112559,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,0.203651327845314,0.775809948670503,0.210407459670956,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0.449724224769707,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0,8.31389355749721,0,0,0,0,0.335012514883631,1.19021820443007,1.75620283072019,2.52216230569906,2.6575762757853,1.11618338060241,3.93271955317771,4.48980952851328,6.79850575333104,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6968616189571,1.42452482933804,4.23506094319298,13.1976098378028,0,0,0.302323556964751,0.377210159511796,2.06711325016541,1.22974059177571,0.516856586336442,1.45413491791002,0.712994756769443,0.948110273807448,1.05418608574999,1.03135543248187,0,0.18006109403131,0,0,0,0,0,0,0.704015124191131,8.26145076368899,0.441056796109924,5.44124634706884,1.61464426695906,1.80938774784468,3.22305328808468,5.0883678920969,0,0,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0.218362563746178,0.404593039154462,0.247960367176008,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,16.7037403151552,18.4983140509938,17.1494703263253,26.5833215138743,0,0,0,0,0,0,0,0,0,0,0.726511433089237,1.59609949360412,1.36586884603307,0.243106717068294,0.209613162627982,0,0.44449345560323,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0,0,0.715308569841963,0.436039249896986,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.355905054372522,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.999242311751784,0.701794825336225,0.429742108096597,0.191288332068843,0.882365676478062,0 | ||
|short_description=p2@Gabrp | |short_description=p2@Gabrp | ||
}} | }} |
Latest revision as of 07:49, 27 September 2015
Short description: | p2@Gabrp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gabrp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1563 |
Association with transcript: | -10bp_to_ENSMUST00000135350_5end |
EntrezGene: | Gabrp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.11e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.11e-07 | 3 |
branched duct epithelial cell | 1.11e-07 | 3 |
epithelial cell of lower respiratory tract | 1.11e-07 | 3 |
respiratory epithelial cell | 1.11e-07 | 3 |
tracheal epithelial cell | 1.11e-07 | 3 |
tracheoblast | 1.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 2.03e-15 | 17 |
thoracic segment organ | 2.03e-15 | 17 |
thoracic cavity | 2.03e-15 | 17 |
thoracic segment of trunk | 2.03e-15 | 17 |
respiratory primordium | 2.03e-15 | 17 |
endoderm of foregut | 2.03e-15 | 17 |
female reproductive system | 6.01e-15 | 9 |
female reproductive organ | 6.40e-13 | 8 |
female organism | 6.24e-12 | 11 |
surface structure | 9.31e-11 | 22 |
zone of skin | 2.58e-10 | 5 |
skin epidermis | 2.58e-10 | 5 |
skin of body | 2.58e-10 | 5 |
integument | 2.58e-10 | 5 |
surface | 2.58e-10 | 5 |
outer epithelium | 2.58e-10 | 5 |
integumental system | 2.58e-10 | 5 |
enveloping layer of ectoderm | 2.58e-10 | 5 |
lung | 3.12e-10 | 14 |
respiratory tube | 3.12e-10 | 14 |
respiration organ | 3.12e-10 | 14 |
pair of lungs | 3.12e-10 | 14 |
lung primordium | 3.12e-10 | 14 |
lung bud | 3.12e-10 | 14 |
forelimb | 1.87e-09 | 7 |
pectoral appendage | 1.87e-09 | 7 |
pectoral appendage bud | 1.87e-09 | 7 |
forelimb bud | 1.87e-09 | 7 |
forelimb/pectoral fin field | 1.87e-09 | 7 |
pectoral complex | 3.50e-08 | 8 |
epithelial bud | 4.09e-08 | 17 |
internal female genitalia | 7.01e-08 | 5 |
trachea | 1.11e-07 | 3 |
respiratory airway | 1.11e-07 | 3 |
tracheobronchial tree | 1.11e-07 | 3 |
lower respiratory tract | 1.11e-07 | 3 |