FFCP PHASE1:Hg19::chr10:119008587..119008609,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:119008587..119008609,+ | |||
|coexpression_cluster_id=C104 | |||
|description=CAGE_peak_at_chr10:119008587..119008609,+ | |description=CAGE_peak_at_chr10:119008587..119008609,+ | ||
|id=chr10:119008587..119008609,+ | |id=chr10:119008587..119008609,+ | ||
|ontology_enrichment_celltype=CL:0002274!2.00e-58!5;CL:0000457!2.00e-58!5;CL:0002191!2.00e-58!5;CL:0000097!2.00e-58!5;CL:0000831!2.00e-58!5;CL:0002028!2.00e-58!5;CL:0000163!9.92e-33!9;CL:0000819!3.25e-19!1;CL:0000785!2.72e-10!2;CL:0000955!2.72e-10!2;CL:0000818!2.72e-10!2;CL:0000954!2.72e-10!2;CL:0000816!2.72e-10!2;CL:0000151!1.06e-08!35;CL:0000766!2.26e-08!76;CL:0000738!9.55e-08!140;CL:0000767!2.05e-07!3;CL:0000817!2.79e-07!3;CL:0002031!9.32e-07!124 | |ontology_enrichment_celltype=CL:0002274!2.00e-58!5;CL:0000457!2.00e-58!5;CL:0002191!2.00e-58!5;CL:0000097!2.00e-58!5;CL:0000831!2.00e-58!5;CL:0002028!2.00e-58!5;CL:0000163!9.92e-33!9;CL:0000819!3.25e-19!1;CL:0000785!2.72e-10!2;CL:0000955!2.72e-10!2;CL:0000818!2.72e-10!2;CL:0000954!2.72e-10!2;CL:0000816!2.72e-10!2;CL:0000151!1.06e-08!35;CL:0000766!2.26e-08!76;CL:0000738!9.55e-08!140;CL:0000767!2.05e-07!3;CL:0000817!2.79e-07!3;CL:0002031!9.32e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.71e-125;5!CL:0000163;3.09e-70;9!CL:0000151;4.01e-18;36!CL:0000767;1.60e-14;3!CL:0000766;2.88e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.71e-125,5;CL:0002028,1.71e-125,5;CL:0000163,3.09e-70,9;CL:0000151,3.00e-18,36;CL:0000767,1.60e-14,3;CL:0000766,3.42e-14,72;CL:0000839,3.87e-10,66;CL:0000557,5.34e-10,67;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060073!3.25e-19!1;DOID:8675!3.25e-19!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!2.25e-19!1;UBERON:0006518!2.25e-19!1;UBERON:0008949!2.25e-19!1;UBERON:0000101!2.25e-19!1;UBERON:0002167!2.25e-19!1;UBERON:0002363!5.62e-19!1;UBERON:0007647!5.62e-19!1;UBERON:0010115!5.62e-19!1;UBERON:0002360!3.58e-10!2;UBERON:0000094!3.58e-10!2;UBERON:0007645!3.58e-10!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.64e-09,76;UBERON:0001474,2.64e-08,82;UBERON:0004765,1.26e-07,90;UBERON:0002405,2.12e-07,93;UBERON:0002390,4.69e-07,98;UBERON:0003061,4.69e-07,98;UBERON:0001434,6.30e-07,100 | |||
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|short_description=p@chr10:119008587..119008609,+ | |short_description=p@chr10:119008587..119008609,+ | ||
}} | }} |
Latest revision as of 10:50, 23 July 2015
Short description: | p@chr10:119008587..119008609, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:119008587..119008609, + |
Coexpression cluster: | C104_Mast_Basophils_immature_CD14_CD34_eye_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.71e-125 | 5 |
basophil mast progenitor cell | 1.71e-125 | 5 |
endocrine cell | 3.09e-70 | 9 |
secretory cell | 3.00e-18 | 36 |
basophil | 1.60e-14 | 3 |
myeloid leukocyte | 3.42e-14 | 72 |
myeloid lineage restricted progenitor cell | 3.87e-10 | 66 |
granulocyte monocyte progenitor cell | 5.34e-10 | 67 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.64e-09 | 76 |
bone element | 2.64e-08 | 82 |
skeletal element | 1.26e-07 | 90 |
immune system | 2.12e-07 | 93 |
hematopoietic system | 4.69e-07 | 98 |
blood island | 4.69e-07 | 98 |
skeletal system | 6.30e-07 | 100 |