FFCP PHASE1:Hg19::chr10:120116498..120116505,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-114bp_to_ENST00000445161_5end | |association_with_transcript=-114bp_to_ENST00000445161_5end | ||
|cluster_id=chr10:120116498..120116505,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_3_at_ENST00000445161_5end | |description=CAGE_peak_3_at_ENST00000445161_5end | ||
|id=chr10:120116498..120116505,+ | |id=chr10:120116498..120116505,+ | ||
|ontology_enrichment_celltype=CL:0000242!6.48e-18!2;CL:0000312!5.73e-08!5;CL:0000240!7.58e-07!6;CL:0000311!7.58e-07!6;CL:0000079!7.58e-07!6;CL:0000237!7.58e-07!6;CL:0000036!7.58e-07!6;CL:0000357!7.58e-07!6;CL:0000114!7.58e-07!6 | |ontology_enrichment_celltype=CL:0000242!6.48e-18!2;CL:0000312!5.73e-08!5;CL:0000240!7.58e-07!6;CL:0000311!7.58e-07!6;CL:0000079!7.58e-07!6;CL:0000237!7.58e-07!6;CL:0000036!7.58e-07!6;CL:0000357!7.58e-07!6;CL:0000114!7.58e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000123;5.04e-34;2!CL:0000242;5.04e-34;2!CL:0000312;1.60e-14;5!CL:0000240;2.45e-12;6!CL:0000311;2.45e-12;6!CL:0000079;2.45e-12;6!CL:0000237;2.45e-12;6!CL:0000362;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.04e-34,2;CL:0000312,1.60e-14,5;CL:0000240,2.45e-12,6;CL:0000311,2.45e-12,6;CL:0000079,2.45e-12,6;CL:0000237,2.45e-12,6;CL:0000036,2.45e-12,6;CL:0000357,2.45e-12,6;CL:0000114,2.45e-12,6;CL:0000362,1.12e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.61e-34;2!CL:0000357;2.45e-12;6!CL:0000114;2.45e-12;6 | |||
|ontology_enrichment_disease=DOID:5409!1.44e-09!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!6.25e-45!3;UBERON:0004054!6.25e-45!3;UBERON:0001301!1.84e-34!1;UBERON:0001000!3.61e-34!1;UBERON:0005352!3.61e-34!1;UBERON:0005904!5.06e-34!4;UBERON:0000989!7.06e-34!1;UBERON:0008811!7.06e-34!1;UBERON:0006258!7.06e-34!1;UBERON:0005876!7.06e-34!1;UBERON:0004874!7.06e-34!1;UBERON:0003135!1.07e-27!11;UBERON:0003101!2.73e-14!22;UBERON:0000079!2.73e-14!22;UBERON:0004876!1.29e-07!20;UBERON:0003133!6.12e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;9.74e-88;3!UBERON:0004054;9.74e-88;3!UBERON:0001301;1.23e-66;1!UBERON:0005904;3.35e-66;4!UBERON:0001000;4.66e-66;1!UBERON:0005352;4.66e-66;1!UBERON:0000058;2.38e-27;10!UBERON:0003135;5.49e-25;11!UBERON:0004175;1.09e-13;21!UBERON:0003101;4.01e-13;22!UBERON:0000079;4.01e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,9.74e-88,3;UBERON:0004054,9.74e-88,3;UBERON:0001301,1.23e-66,1;UBERON:0005904,3.35e-66,4;UBERON:0001000,4.66e-66,1;UBERON:0005352,4.66e-66,1;UBERON:0003135,5.49e-25,11;UBERON:0000058,5.27e-15,19;UBERON:0003101,4.01e-13,22;UBERON:0000079,4.01e-13,22;UBERON:0004175,1.09e-11,25;UBERON:0005103,1.24e-09,8;UBERON:0000083,1.24e-09,8;UBERON:0009201,1.24e-09,8;UBERON:0006553,1.24e-09,8;UBERON:0003074,1.24e-09,8;UBERON:0003060,1.24e-09,8;UBERON:0000080,1.04e-08,9;UBERON:0002120,1.04e-08,9;UBERON:0004875,1.04e-08,9;UBERON:0005721,1.04e-08,9;UBERON:0005754,1.04e-08,9;UBERON:0007297,1.04e-08,9;UBERON:0004876,2.32e-07,11;UBERON:0003887,7.48e-07,12 | |||
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|short_description=p3@ENST00000445161 | |short_description=p3@ENST00000445161 | ||
}} | }} |
Latest revision as of 10:54, 23 July 2015
Short description: | p3@ENST00000445161 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000445161_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -114bp_to_ENST00000445161_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.04e-34 | 2 |
keratinocyte | 1.60e-14 | 5 |
stratified squamous epithelial cell | 2.45e-12 | 6 |
keratin accumulating cell | 2.45e-12 | 6 |
stratified epithelial cell | 2.45e-12 | 6 |
keratinizing barrier epithelial cell | 2.45e-12 | 6 |
epithelial fate stem cell | 2.45e-12 | 6 |
stratified epithelial stem cell | 2.45e-12 | 6 |
surface ectodermal cell | 2.45e-12 | 6 |
epidermal cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 9.74e-88 | 3 |
internal male genitalia | 9.74e-88 | 3 |
epididymis | 1.23e-66 | 1 |
duct of male reproductive system | 3.35e-66 | 4 |
vas deferens | 4.66e-66 | 1 |
spermatic cord | 4.66e-66 | 1 |
male reproductive organ | 5.49e-25 | 11 |
duct | 5.27e-15 | 19 |
male organism | 4.01e-13 | 22 |
male reproductive system | 4.01e-13 | 22 |
internal genitalia | 1.09e-11 | 25 |
mesonephric epithelium | 1.24e-09 | 8 |
mesonephric tubule | 1.24e-09 | 8 |
nephric duct | 1.24e-09 | 8 |
renal duct | 1.24e-09 | 8 |
mesonephric duct | 1.24e-09 | 8 |
pronephric duct | 1.24e-09 | 8 |
mesonephros | 1.04e-08 | 9 |
pronephros | 1.04e-08 | 9 |
nephrogenic cord | 1.04e-08 | 9 |
pronephric mesoderm | 1.04e-08 | 9 |
rostral part of nephrogenic cord | 1.04e-08 | 9 |
presumptive pronephric mesoderm | 1.04e-08 | 9 |
urogenital ridge | 2.32e-07 | 11 |
intraembryonic coelom | 7.48e-07 | 12 |