FFCP PHASE1:Mm9::chr10:85807298..85807307,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=323 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:85807298..85807307,+ | |||
|description=CAGE_peak_at_chr10:85807298..85807307,+ | |description=CAGE_peak_at_chr10:85807298..85807307,+ | ||
|id=chr10:85807298..85807307,+ | |id=chr10:85807298..85807307,+ | ||
|ontology_enrichment_celltype=CL:0000333!8.74e-07!10;CL:0000095!8.74e-07!10;CL:0000243!8.74e-07!10;CL:0000123!8.74e-07!10;CL:0000125!8.74e-07!10;CL:0000030!8.74e-07!10;CL:0000339!8.74e-07!10 | |ontology_enrichment_celltype=CL:0000333!8.74e-07!10;CL:0000095!8.74e-07!10;CL:0000243!8.74e-07!10;CL:0000123!8.74e-07!10;CL:0000125!8.74e-07!10;CL:0000030!8.74e-07!10;CL:0000339!8.74e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.30e-18,2;CL:0002604,1.30e-18,2;CL:0002453,8.50e-18,8;CL:0000333,2.54e-14,10;CL:0000095,2.54e-14,10;CL:0000243,2.54e-14,10;CL:0000123,2.54e-14,10;CL:0000125,2.54e-14,10;CL:0000030,2.54e-14,10;CL:0000339,2.54e-14,10;CL:0000680,3.32e-14,6;CL:0000187,3.32e-14,6;CL:0000056,3.32e-14,6;CL:0000128,8.25e-14,6;CL:0000126,8.25e-14,6;CL:0000127,8.25e-14,6;CL:0000192,3.66e-13,3;CL:0000359,3.66e-13,3;CL:0002539,3.66e-13,3;CL:0000514,3.66e-13,3;CL:0000222,2.87e-12,7;CL:0000355,1.12e-09,9;CL:0002321,1.17e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.66e-13,3;UBERON:0004237,3.66e-13,3;UBERON:0004695,3.66e-13,3;UBERON:0002111,3.66e-13,3;UBERON:0004178,3.66e-13,3;UBERON:0000947,4.16e-10,4;UBERON:0001637,4.16e-10,4;UBERON:0004573,4.16e-10,4;UBERON:0003509,4.16e-10,4;UBERON:0004571,4.16e-10,4;UBERON:0010191,4.16e-10,4;UBERON:0004572,4.16e-10,4;UBERON:0001134,1.12e-09,9;UBERON:0002036,1.12e-09,9;UBERON:0002385,1.12e-09,9;UBERON:0000486,1.12e-09,9;UBERON:0007503,1.12e-09,9;UBERON:0001015,1.12e-09,9;UBERON:0002329,1.12e-09,9;UBERON:0003082,1.12e-09,9;UBERON:0003059,1.12e-09,9;UBERON:0007282,1.12e-09,9;UBERON:0004290,1.12e-09,9;UBERON:0009618,1.12e-09,9;UBERON:0000383,9.11e-09,10;UBERON:0000055,2.90e-08,5;UBERON:0007500,2.90e-08,5;UBERON:0001981,2.90e-08,5;UBERON:0002049,2.90e-08,5;UBERON:0007798,2.90e-08,5;UBERON:0004537,2.90e-08,5;UBERON:0006965,2.90e-08,5;UBERON:0007524,5.09e-08,11;UBERON:0003077,5.09e-08,11;UBERON:0007285,5.09e-08,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.93993100536592,0.367093504323363,0.782391344348039,1.30815093828268,1.31811709640683,1.94429899074283,0.419959264876088,0,0,0,0,0,0,1.54701627683233,0,0,0.633831403506179,0,0,0,0,0.7104801149461,1.19840044207362,0.384218305321555,0,0,0,0,0.441737081903227,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.427115042397309,0,0.605809546665472,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0.34255163915718,0.776813650941515,2.3750742250372,0.346970653532272,0,0,0,0.117588707135705,0.628332956648377,0.988779870937496,0.289198713839823,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0.255715457330331,0.41557608911912,0.162241263067758,0,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.374806898238915,0.517406741478031,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0.32833492815819,0.0810688095458557,0,0,0.402619256281115,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0.502670417600539,0,0,0,0,0,0.758671603812327,0,0,0,0,0.140271639780637,0.569128834118316,1.03327103585722,0.941992367048249,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0.234690248288502,0,0.476087281772027,0.390267295715598,0.157635144106191,0.44292937929755,0.478364305972461,0.655453258862952,0.345369963731791,0.867894351489069,0,0,0,0.275936746304732,0,0,0.491804836130026,0.252470927204373,0,0.390438744296638,0,0,0.222798674082394,0,0,0.292255857911312,0.790575555893047,0.642642632843614,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0,0.356737635204141,0.164549020602121,0,0,0.42366414172764,0,0.8244312647074,0.161464426695906,0,0.119372344003136,0.492422699235184,0,0,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0.299033092087958,0,0,0.258319646955462,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.120195449519969,0,0,0,0.100826185136841,0.292373642219257,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.760437899670719,0,0,0.256100609619477,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.581385666529314,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.93993100536592,0.367093504323363,0.782391344348039,1.30815093828268,1.31811709640683,1.94429899074283,0.419959264876088,0,0,0,0,0,0,1.54701627683233,0,0,0.633831403506179,0,0,0,0,0.7104801149461,1.19840044207362,0.384218305321555,0,0,0,0,0.441737081903227,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0.427115042397309,0,0.605809546665472,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0.34255163915718,0.776813650941515,2.3750742250372,0.346970653532272,0,0,0,0.117588707135705,0.628332956648377,0.988779870937496,0.289198713839823,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0.255715457330331,0.41557608911912,0.162241263067758,0,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.374806898238915,0.517406741478031,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0.32833492815819,0.0810688095458557,0,0,0.402619256281115,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0.502670417600539,0,0,0,0,0,0.758671603812327,0,0,0,0,0.140271639780637,0.569128834118316,1.03327103585722,0.941992367048249,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0.234690248288502,0,0.476087281772027,0.390267295715598,0.157635144106191,0.44292937929755,0.478364305972461,0.655453258862952,0.345369963731791,0.867894351489069,0,0,0,0.275936746304732,0,0,0.491804836130026,0.252470927204373,0,0.390438744296638,0,0,0.222798674082394,0,0,0.292255857911312,0.790575555893047,0.642642632843614,0.141940085208269,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0,0.356737635204141,0.164549020602121,0,0,0.42366414172764,0,0.8244312647074,0.161464426695906,0,0.119372344003136,0.492422699235184,0,0,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0.129614973291793,0,0,0.299033092087958,0,0,0.258319646955462,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.120195449519969,0,0,0,0.100826185136841,0.292373642219257,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.760437899670719,0,0,0.256100609619477,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.581385666529314,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr10:85807298..85807307,+ | |short_description=p@chr10:85807298..85807307,+ | ||
}} | }} |
Latest revision as of 23:04, 4 August 2015
Short description: | p@chr10:85807298..85807307, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:85807298..85807307, + |
Coexpression cluster: | MCL_coexpression_mm9:323 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.30e-18 | 2 |
astrocyte of the hippocampus | 1.30e-18 | 2 |
oligodendrocyte precursor cell | 8.50e-18 | 8 |
migratory neural crest cell | 2.54e-14 | 10 |
neuron associated cell | 2.54e-14 | 10 |
glial cell (sensu Vertebrata) | 2.54e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 2.54e-14 | 10 |
glial cell | 2.54e-14 | 10 |
glioblast | 2.54e-14 | 10 |
glioblast (sensu Vertebrata) | 2.54e-14 | 10 |
muscle precursor cell | 3.32e-14 | 6 |
muscle cell | 3.32e-14 | 6 |
myoblast | 3.32e-14 | 6 |
oligodendrocyte | 8.25e-14 | 6 |
macroglial cell | 8.25e-14 | 6 |
astrocyte | 8.25e-14 | 6 |
smooth muscle cell | 3.66e-13 | 3 |
vascular associated smooth muscle cell | 3.66e-13 | 3 |
aortic smooth muscle cell | 3.66e-13 | 3 |
smooth muscle myoblast | 3.66e-13 | 3 |
mesodermal cell | 2.87e-12 | 7 |
multi-potent skeletal muscle stem cell | 1.12e-09 | 9 |
embryonic cell | 1.17e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 3.66e-13 | 3 |
blood vessel smooth muscle | 3.66e-13 | 3 |
arterial system smooth muscle | 3.66e-13 | 3 |
artery smooth muscle tissue | 3.66e-13 | 3 |
aorta smooth muscle tissue | 3.66e-13 | 3 |
aorta | 4.16e-10 | 4 |
artery | 4.16e-10 | 4 |
systemic artery | 4.16e-10 | 4 |
arterial blood vessel | 4.16e-10 | 4 |
systemic arterial system | 4.16e-10 | 4 |
aortic system | 4.16e-10 | 4 |
arterial system | 4.16e-10 | 4 |
skeletal muscle tissue | 1.12e-09 | 9 |
striated muscle tissue | 1.12e-09 | 9 |
muscle tissue | 1.12e-09 | 9 |
multilaminar epithelium | 1.12e-09 | 9 |
epithelial vesicle | 1.12e-09 | 9 |
musculature | 1.12e-09 | 9 |
somite | 1.12e-09 | 9 |
myotome | 1.12e-09 | 9 |
presomitic mesoderm | 1.12e-09 | 9 |
presumptive segmental plate | 1.12e-09 | 9 |
dermomyotome | 1.12e-09 | 9 |
trunk paraxial mesoderm | 1.12e-09 | 9 |
musculature of body | 9.11e-09 | 10 |
vessel | 2.90e-08 | 5 |
epithelial tube open at both ends | 2.90e-08 | 5 |
blood vessel | 2.90e-08 | 5 |
vasculature | 2.90e-08 | 5 |
vascular system | 2.90e-08 | 5 |
blood vasculature | 2.90e-08 | 5 |
vascular cord | 2.90e-08 | 5 |
dense mesenchyme tissue | 5.09e-08 | 11 |
paraxial mesoderm | 5.09e-08 | 11 |
presumptive paraxial mesoderm | 5.09e-08 | 11 |