FFCP PHASE1:Mm9::chr14:79935342..79935383,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=280 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:79935342..79935383,+ | |||
|description=CAGE_peak_at_chr14:79935342..79935383,+ | |description=CAGE_peak_at_chr14:79935342..79935383,+ | ||
|id=chr14:79935342..79935383,+ | |id=chr14:79935342..79935383,+ | ||
|ontology_enrichment_celltype=CL:0000988!3.48e-07!32;CL:0002032!3.48e-07!32;CL:0000037!3.48e-07!32;CL:0000566!3.48e-07!32;CL:0000837!3.48e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.53e-11,32;CL:0002032,2.53e-11,32;CL:0000037,2.53e-11,32;CL:0000837,2.53e-11,32;CL:0000838,1.15e-08,12;CL:0000791,1.82e-08,9;CL:0000789,1.82e-08,9;CL:0002420,1.82e-08,9;CL:0002419,1.82e-08,9;CL:0000790,1.82e-08,9;CL:0000084,9.77e-08,11;CL:0000827,9.77e-08,11;CL:0000542,1.05e-07,13;CL:0000051,1.05e-07,13;CL:0002031,1.17e-07,25;CL:0000624,1.84e-07,8;CL:0002320,4.16e-07,46;CL:0000134,4.16e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!9.35e-12!193;UBERON:0004120!9.35e-12!193;UBERON:0006603!9.35e-12!193;UBERON:0002405!3.43e-10!70;UBERON:0005057!4.62e-09!51;UBERON:0001041!2.60e-08!92;UBERON:0003081!2.99e-08!88;UBERON:0000077!5.59e-08!97;UBERON:0003104!1.75e-07!131;UBERON:0009142!1.75e-07!131;UBERON:0002193!4.57e-07!48;UBERON:0009569!4.80e-07!66;UBERON:0001048!6.44e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,2.39e-11,80;UBERON:0003081,1.03e-10,87;UBERON:0002390,1.70e-10,45;UBERON:0003061,1.70e-10,45;UBERON:0002193,2.77e-10,48;UBERON:0002405,2.77e-10,48;UBERON:0005911,1.01e-08,69;UBERON:0001048,1.11e-08,134;UBERON:0004177,2.01e-08,29;UBERON:0005057,2.01e-08,29;UBERON:0000077,1.61e-07,35;UBERON:0000926,2.20e-07,120;UBERON:0004120,2.20e-07,120;UBERON:0006603,2.20e-07,120;UBERON:0002384,4.16e-07,46;UBERON:0003914,5.03e-07,47;UBERON:0001004,8.66e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,8.52213934714403,19.006477490475,10.5329036844897,1.88339765048055,1.43589886191606,25.5089087597497,23.4286678482913,1.99865857089398,9.11138703254217,3.49780939064073,11.8298312009339,8.5010948835558,8.91218268775863,1.61582251287033,2.08510997521859,0,0.47997726838022,0.91763712426868,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,7.53356935326434,4.6880120671428,4.71171369576418,17.6469446409304,8.87959130445979,5.34061388334269,0,0,0,0,0,0,0,0,0,46.6435644840507,77.6137491952139,94.7784513581748,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0.210324961351382,0,0,0.244981598429908,0,0,0,0.255374676170375,0.307213066512487,0.263772575460388,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0.908714319998209,0,26.3776684718527,4.30211938490693,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,2.2836775943812,16.0541487861246,1.33597925158342,0.867426633830679,0,0.461230994512117,0.904335843315735,0.823120949949934,1.13099932196708,0.494389935468748,2.89198713839823,3.5384422077995,0.808834249737046,2.42925670306433,0.969750506270444,0,0.292780797011547,0,0.255457055208591,42.1749238260839,20.9965955847693,26.4306072311975,0.299581278809645,0.915001205637253,0,0.347648640384553,0.511430914660661,0.41557608911912,0.324482526135515,0.305518091550949,2.98576729464223,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.60281927134286,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0,0.43839146485515,0.834141747676794,1.0447564995665,1.23469281844766,0.398068533636986,6.31991868581911,3.08817488537658,6.53576048609863,1.44988040774851,3.04883877975425,2.16074473753218,1.42046841351126,1.37734962223183,1.85120535464854,0.930135779001631,0.536546802799238,1.40118410840603,0.658239399653922,2.62667942526552,2.59420190546738,1.90059983652932,3.51280184465681,3.75777972529041,0.420579897128254,0.308713837137853,0.330418782983798,0,0,0.696710015581316,0.38660238396628,0.605050573870028,0.22237804384487,0,0.474529061544512,0.494096864172033,0.502670417600539,1.39269530428806,0.58489226135736,0,1.08069024937347,1.1948476395262,1.32767530667157,0.799739588268102,0,0.610953983535943,0.775809948670503,0.631222379012867,0.822074982615345,0.295220295959204,0.627994911365499,1.23397163921801,0.889357881261447,4.50481785433454,3.34150291692445,4.94696647246678,3.24576194221605,2.894125917029,2.03700681425136,3.45235364940973,3.24270453550071,2.19649130550465,1.43768206527355,1.86070473834252,0.312037673114561,1.51547326768267,1.25578189465339,1.92977408545347,5.91210208533135,0.189491411770485,0.162964976442026,0.848725428875941,0.938760993154008,0.502518772325447,1.19021820443007,2.34160377429359,4.25614889086716,4.20782910332672,2.23236676120482,4.91589944147214,5.69860440157455,5.64131328467895,0,0,1.47529281905711,0.551873492609465,0.321101179975584,0.117211686592203,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0.642642632843614,0.851640511249612,0.712262414669021,0.81443479676788,1.15479086080775,2.65490276679926,0,0,0.377210159511796,0,0.922305443831782,1.03371317267288,1.81766864738753,0.712994756769443,0.948110273807448,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0,0.177340233642274,0.535106452806212,0.164549020602121,0.608929898229199,0.704015124191131,0.21183207086382,0.661585194164886,0.98931751764888,1.13025098687134,0.72375509913787,0.596861720015682,0,1.1659233465194,0.370850604021019,5.12612642393558,2.27025554759545,3.33350149265481,5.08594833912666,5.33107488111998,6.86334519619568,53.0332701580829,50.8023771934878,49.7519905695926,0,0.316335993581135,0.406638934253697,0.216010681643603,0.418176592028937,0.655087691238533,0.134864346384821,0.578574190077352,0.523511883968059,0.777689839750757,1.24267862617385,0,0.598066184175915,0.330916980914195,0.388902376688095,0.516639293910924,0.506868376472335,0.117357238645754,0,0,0,0,2.21207784439725,0.405450430580328,0.410843828659309,1.29920822977795,1.61124026100733,2.18549490259391,1.80293174279953,2.21534290761866,1.21159739937777,0.381034033274999,0.504130925684203,2.33898913775406,1.6356013078856,2.80504565235765,1.36038230169127,0,0,0,1.35232715822533,1.50145980360946,0.549454872801795,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0.31136204275253,0.798049746802062,0.341467211508268,0.486213434136588,1.04806581313991,0.919217542250071,0.888986911206461,0.618105171716683,0.962757628775446,0.505394423527595,0.25347929989024,1.50901073108861,1.03005658216871,0.512201219238954,0.976402972245426,1.42888107384922,1.0429589335037,0,0.824171801606613,0.588795680537589,0.685738504770831,0.887379030796687,0.953744759789284,0.872078499793971,1.12931256498397,0.761531471025089,0.365855945745545,0.526139422875686,0.950628796921032,0.561142271657738,1.30498519936592,0.788035859004508,0.409231043169689,0.929621047115796,0.192906610981141,0.249810577937946,0.935726433781634,0.429742108096597,0.382576664137687,0.661774257358546,1.39120701372253 | |phase1_expression=0,0,0,0,0,0,0,8.52213934714403,19.006477490475,10.5329036844897,1.88339765048055,1.43589886191606,25.5089087597497,23.4286678482913,1.99865857089398,9.11138703254217,3.49780939064073,11.8298312009339,8.5010948835558,8.91218268775863,1.61582251287033,2.08510997521859,0,0.47997726838022,0.91763712426868,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,7.53356935326434,4.6880120671428,4.71171369576418,17.6469446409304,8.87959130445979,5.34061388334269,0,0,0,0,0,0,0,0,0,46.6435644840507,77.6137491952139,94.7784513581748,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0.210324961351382,0,0,0.244981598429908,0,0,0,0.255374676170375,0.307213066512487,0.263772575460388,0,0,0,0,0.30559649555362,0,0.142371680799103,0,0.908714319998209,0,26.3776684718527,4.30211938490693,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0.216491041011214,0,0.505524445014783,2.2836775943812,16.0541487861246,1.33597925158342,0.867426633830679,0,0.461230994512117,0.904335843315735,0.823120949949934,1.13099932196708,0.494389935468748,2.89198713839823,3.5384422077995,0.808834249737046,2.42925670306433,0.969750506270444,0,0.292780797011547,0,0.255457055208591,42.1749238260839,20.9965955847693,26.4306072311975,0.299581278809645,0.915001205637253,0,0.347648640384553,0.511430914660661,0.41557608911912,0.324482526135515,0.305518091550949,2.98576729464223,0,0.210441855886474,0.130120442962704,0,0.360124259610698,0.60281927134286,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0,0.43839146485515,0.834141747676794,1.0447564995665,1.23469281844766,0.398068533636986,6.31991868581911,3.08817488537658,6.53576048609863,1.44988040774851,3.04883877975425,2.16074473753218,1.42046841351126,1.37734962223183,1.85120535464854,0.930135779001631,0.536546802799238,1.40118410840603,0.658239399653922,2.62667942526552,2.59420190546738,1.90059983652932,3.51280184465681,3.75777972529041,0.420579897128254,0.308713837137853,0.330418782983798,0,0,0.696710015581316,0.38660238396628,0.605050573870028,0.22237804384487,0,0.474529061544512,0.494096864172033,0.502670417600539,1.39269530428806,0.58489226135736,0,1.08069024937347,1.1948476395262,1.32767530667157,0.799739588268102,0,0.610953983535943,0.775809948670503,0.631222379012867,0.822074982615345,0.295220295959204,0.627994911365499,1.23397163921801,0.889357881261447,4.50481785433454,3.34150291692445,4.94696647246678,3.24576194221605,2.894125917029,2.03700681425136,3.45235364940973,3.24270453550071,2.19649130550465,1.43768206527355,1.86070473834252,0.312037673114561,1.51547326768267,1.25578189465339,1.92977408545347,5.91210208533135,0.189491411770485,0.162964976442026,0.848725428875941,0.938760993154008,0.502518772325447,1.19021820443007,2.34160377429359,4.25614889086716,4.20782910332672,2.23236676120482,4.91589944147214,5.69860440157455,5.64131328467895,0,0,1.47529281905711,0.551873492609465,0.321101179975584,0.117211686592203,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0.642642632843614,0.851640511249612,0.712262414669021,0.81443479676788,1.15479086080775,2.65490276679926,0,0,0.377210159511796,0,0.922305443831782,1.03371317267288,1.81766864738753,0.712994756769443,0.948110273807448,0,0,0.340439605753788,0.36012218806262,0.258717367565509,0,0.177340233642274,0.535106452806212,0.164549020602121,0.608929898229199,0.704015124191131,0.21183207086382,0.661585194164886,0.98931751764888,1.13025098687134,0.72375509913787,0.596861720015682,0,1.1659233465194,0.370850604021019,5.12612642393558,2.27025554759545,3.33350149265481,5.08594833912666,5.33107488111998,6.86334519619568,53.0332701580829,50.8023771934878,49.7519905695926,0,0.316335993581135,0.406638934253697,0.216010681643603,0.418176592028937,0.655087691238533,0.134864346384821,0.578574190077352,0.523511883968059,0.777689839750757,1.24267862617385,0,0.598066184175915,0.330916980914195,0.388902376688095,0.516639293910924,0.506868376472335,0.117357238645754,0,0,0,0,2.21207784439725,0.405450430580328,0.410843828659309,1.29920822977795,1.61124026100733,2.18549490259391,1.80293174279953,2.21534290761866,1.21159739937777,0.381034033274999,0.504130925684203,2.33898913775406,1.6356013078856,2.80504565235765,1.36038230169127,0,0,0,1.35232715822533,1.50145980360946,0.549454872801795,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0.31136204275253,0.798049746802062,0.341467211508268,0.486213434136588,1.04806581313991,0.919217542250071,0.888986911206461,0.618105171716683,0.962757628775446,0.505394423527595,0.25347929989024,1.50901073108861,1.03005658216871,0.512201219238954,0.976402972245426,1.42888107384922,1.0429589335037,0,0.824171801606613,0.588795680537589,0.685738504770831,0.887379030796687,0.953744759789284,0.872078499793971,1.12931256498397,0.761531471025089,0.365855945745545,0.526139422875686,0.950628796921032,0.561142271657738,1.30498519936592,0.788035859004508,0.409231043169689,0.929621047115796,0.192906610981141,0.249810577937946,0.935726433781634,0.429742108096597,0.382576664137687,0.661774257358546,1.39120701372253 | ||
|short_description=p@chr14:79935342..79935383,+ | |short_description=p@chr14:79935342..79935383,+ | ||
}} | }} |
Latest revision as of 21:02, 4 August 2015
Short description: | p@chr14:79935342..79935383, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:79935342..79935383, + |
Coexpression cluster: | MCL_coexpression_mm9:280 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.53e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.53e-11 | 32 |
hematopoietic stem cell | 2.53e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.53e-11 | 32 |
lymphoid lineage restricted progenitor cell | 1.15e-08 | 12 |
mature alpha-beta T cell | 1.82e-08 | 9 |
alpha-beta T cell | 1.82e-08 | 9 |
immature T cell | 1.82e-08 | 9 |
mature T cell | 1.82e-08 | 9 |
immature alpha-beta T cell | 1.82e-08 | 9 |
T cell | 9.77e-08 | 11 |
pro-T cell | 9.77e-08 | 11 |
lymphocyte | 1.05e-07 | 13 |
common lymphoid progenitor | 1.05e-07 | 13 |
hematopoietic lineage restricted progenitor cell | 1.17e-07 | 25 |
CD4-positive, alpha-beta T cell | 1.84e-07 | 8 |
connective tissue cell | 4.16e-07 | 46 |
mesenchymal cell | 4.16e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
foregut | 2.39e-11 | 80 |
lateral plate mesoderm | 1.03e-10 | 87 |
hematopoietic system | 1.70e-10 | 45 |
blood island | 1.70e-10 | 45 |
hemolymphoid system | 2.77e-10 | 48 |
immune system | 2.77e-10 | 48 |
endo-epithelium | 1.01e-08 | 69 |
primordium | 1.11e-08 | 134 |
hemopoietic organ | 2.01e-08 | 29 |
immune organ | 2.01e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 1.61e-07 | 35 |
mesoderm | 2.20e-07 | 120 |
mesoderm-derived structure | 2.20e-07 | 120 |
presumptive mesoderm | 2.20e-07 | 120 |
connective tissue | 4.16e-07 | 46 |
epithelial tube | 5.03e-07 | 47 |
respiratory system | 8.66e-07 | 42 |