FFCP PHASE1:Hg19::chr10:70088287..70088298,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:70088287..70088298,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:70088287..70088298,+ | |description=CAGE_peak_at_chr10:70088287..70088298,+ | ||
|id=chr10:70088287..70088298,+ | |id=chr10:70088287..70088298,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.19e-40!42;CL:0000860!3.53e-38!45;CL:0000766!8.09e-35!76;CL:0000763!1.63e-31!112;CL:0000049!1.63e-31!112;CL:0000839!1.92e-31!70;CL:0002194!7.14e-31!63;CL:0000576!7.14e-31!63;CL:0000040!7.14e-31!63;CL:0000559!7.14e-31!63;CL:0000557!8.54e-31!71;CL:0002009!1.67e-29!65;CL:0002032!3.09e-18!165;CL:0000837!3.09e-18!165;CL:0000037!9.33e-17!172;CL:0000566!9.33e-17!172;CL:0000988!7.33e-15!182;CL:0000738!1.54e-14!140;CL:0002031!2.23e-14!124;CL:0002087!7.40e-13!119 | |ontology_enrichment_celltype=CL:0002057!9.19e-40!42;CL:0000860!3.53e-38!45;CL:0000766!8.09e-35!76;CL:0000763!1.63e-31!112;CL:0000049!1.63e-31!112;CL:0000839!1.92e-31!70;CL:0002194!7.14e-31!63;CL:0000576!7.14e-31!63;CL:0000040!7.14e-31!63;CL:0000559!7.14e-31!63;CL:0000557!8.54e-31!71;CL:0002009!1.67e-29!65;CL:0002032!3.09e-18!165;CL:0000837!3.09e-18!165;CL:0000037!9.33e-17!172;CL:0000566!9.33e-17!172;CL:0000988!7.33e-15!182;CL:0000738!1.54e-14!140;CL:0002031!2.23e-14!124;CL:0002087!7.40e-13!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.59e-83;33!CL:0002057;1.59e-83;33!CL:0000473;1.86e-57;39!CL:0000234;1.86e-57;39!CL:0000576;3.55e-40;48!CL:0000766;5.98e-21;69!CL:0000763;1.33e-12;100!CL:0002087;2.03e-09;104!CL:0000775;9.22e-08;3!CL:0000738;2.70e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.44e-70,42;CL:0002057,1.44e-70,42;CL:0000473,4.75e-61,48;CL:0000234,4.75e-61,48;CL:0000766,9.06e-49,72;CL:0002194,1.01e-47,59;CL:0000576,1.01e-47,59;CL:0000040,1.01e-47,59;CL:0000559,1.01e-47,59;CL:0002009,5.31e-46,61;CL:0000839,3.77e-42,66;CL:0000557,1.90e-41,67;CL:0000763,1.21e-30,108;CL:0000049,1.21e-30,108;CL:0000738,3.97e-23,136;CL:0002087,5.66e-22,115;CL:0002031,7.81e-21,120;CL:0002032,1.30e-18,161;CL:0000837,1.30e-18,161;CL:0000037,1.38e-17,168;CL:0000988,2.17e-16,177;CL:0000775,8.34e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.09e-49;42!CL:0000049;2.69e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.62e-30!102;UBERON:0003061!1.62e-30!102;UBERON:0002193!1.31e-28!112;UBERON:0002371!4.40e-27!80;UBERON:0001474!3.56e-24!86;UBERON:0004765!1.28e-21!101;UBERON:0001434!1.28e-21!101;UBERON:0002405!3.91e-17!115;UBERON:0003081!1.25e-09!216;UBERON:0007023!2.64e-09!115;UBERON:0001049!3.13e-09!57;UBERON:0005068!3.13e-09!57;UBERON:0006241!3.13e-09!57;UBERON:0007135!3.13e-09!57;UBERON:0002204!8.78e-09!167;UBERON:0001893!1.58e-08!34;UBERON:0002780!2.57e-08!41;UBERON:0001890!2.57e-08!41;UBERON:0006240!2.57e-08!41;UBERON:0003080!5.29e-08!42;UBERON:0002791!5.94e-08!33;UBERON:0000178!7.36e-08!15;UBERON:0000179!7.36e-08!15;UBERON:0000463!7.36e-08!15;UBERON:0002616!7.39e-08!59;UBERON:0002020!9.72e-08!34;UBERON:0003528!9.72e-08!34;UBERON:0001869!4.44e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.19e-25;15!UBERON:0000179;1.19e-25;15!UBERON:0000463;1.19e-25;15!UBERON:0002390;2.51e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.19e-53,98;UBERON:0003061,9.19e-53,98;UBERON:0002193,2.67e-47,108;UBERON:0002371,6.02e-36,76;UBERON:0001474,6.09e-33,82;UBERON:0004765,1.49e-29,90;UBERON:0002405,1.98e-28,93;UBERON:0001434,4.53e-26,100;UBERON:0000178,1.13e-25,15;UBERON:0000179,1.13e-25,15;UBERON:0000463,1.13e-25,15;UBERON:0003081,4.52e-22,203;UBERON:0002204,1.90e-13,167;UBERON:0000926,8.93e-13,315;UBERON:0004120,8.93e-13,315;UBERON:0006603,8.93e-13,315 | |||
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| ||
|short_description=p@chr10:70088287..70088298,+ | |short_description=p@chr10:70088287..70088298,+ | ||
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Latest revision as of 14:56, 23 July 2015
Short description: | p@chr10:70088287..70088298, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:70088287..70088298, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.44e-70 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.44e-70 | 42 |
defensive cell | 4.75e-61 | 48 |
phagocyte | 4.75e-61 | 48 |
myeloid leukocyte | 9.06e-49 | 72 |
monopoietic cell | 1.01e-47 | 59 |
monocyte | 1.01e-47 | 59 |
monoblast | 1.01e-47 | 59 |
promonocyte | 1.01e-47 | 59 |
macrophage dendritic cell progenitor | 5.31e-46 | 61 |
myeloid lineage restricted progenitor cell | 3.77e-42 | 66 |
granulocyte monocyte progenitor cell | 1.90e-41 | 67 |
myeloid cell | 1.21e-30 | 108 |
common myeloid progenitor | 1.21e-30 | 108 |
leukocyte | 3.97e-23 | 136 |
nongranular leukocyte | 5.66e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 7.81e-21 | 120 |
hematopoietic oligopotent progenitor cell | 1.30e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.30e-18 | 161 |
hematopoietic stem cell | 1.38e-17 | 168 |
hematopoietic cell | 2.17e-16 | 177 |
neutrophil | 8.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.19e-53 | 98 |
blood island | 9.19e-53 | 98 |
hemolymphoid system | 2.67e-47 | 108 |
bone marrow | 6.02e-36 | 76 |
bone element | 6.09e-33 | 82 |
skeletal element | 1.49e-29 | 90 |
immune system | 1.98e-28 | 93 |
skeletal system | 4.53e-26 | 100 |
blood | 1.13e-25 | 15 |
haemolymphatic fluid | 1.13e-25 | 15 |
organism substance | 1.13e-25 | 15 |
lateral plate mesoderm | 4.52e-22 | 203 |
musculoskeletal system | 1.90e-13 | 167 |
mesoderm | 8.93e-13 | 315 |
mesoderm-derived structure | 8.93e-13 | 315 |
presumptive mesoderm | 8.93e-13 | 315 |