FFCP PHASE1:Hg19::chr10:73576943..73576992,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:73576943..73576992,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_at_chr10:73576943..73576992,- | |description=CAGE_peak_at_chr10:73576943..73576992,- | ||
|id=chr10:73576943..73576992,- | |id=chr10:73576943..73576992,- | ||
|ontology_enrichment_celltype=CL:0002194!5.92e-26!63;CL:0000576!5.92e-26!63;CL:0000040!5.92e-26!63;CL:0000559!5.92e-26!63;CL:0002009!1.36e-25!65;CL:0002057!5.73e-24!42;CL:0000766!2.48e-23!76;CL:0000557!1.88e-22!71;CL:0000839!3.69e-22!70;CL:0000860!7.77e-21!45;CL:0000763!2.28e-09!112;CL:0000049!2.28e-09!112 | |ontology_enrichment_celltype=CL:0002194!5.92e-26!63;CL:0000576!5.92e-26!63;CL:0000040!5.92e-26!63;CL:0000559!5.92e-26!63;CL:0002009!1.36e-25!65;CL:0002057!5.73e-24!42;CL:0000766!2.48e-23!76;CL:0000557!1.88e-22!71;CL:0000839!3.69e-22!70;CL:0000860!7.77e-21!45;CL:0000763!2.28e-09!112;CL:0000049!2.28e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.36e-30;39!CL:0000234;1.36e-30;39!CL:0000860;1.28e-29;33!CL:0002057;1.28e-29;33!CL:0000576;5.27e-25;48!CL:0000766;3.13e-17;69!CL:0000235;2.90e-08;6!CL:0000763;7.28e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.29e-46,59;CL:0000576,4.29e-46,59;CL:0000040,4.29e-46,59;CL:0000559,4.29e-46,59;CL:0000473,2.39e-45,48;CL:0000234,2.39e-45,48;CL:0002009,7.59e-44,61;CL:0000766,1.58e-39,72;CL:0000839,7.76e-39,66;CL:0000860,1.92e-38,42;CL:0002057,1.92e-38,42;CL:0000557,6.30e-38,67;CL:0000763,5.42e-19,108;CL:0000049,5.42e-19,108;CL:0002087,4.29e-15,115;CL:0002031,4.28e-13,120;CL:0000738,7.95e-13,136;CL:0000235,3.05e-08,6;CL:0002032,2.52e-07,161;CL:0000837,2.52e-07,161;CL:0000037,4.53e-07,168;CL:0002393,5.92e-07,9;CL:0002397,5.92e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.89e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.15e-19!80;UBERON:0001474!4.00e-18!86;UBERON:0002405!9.61e-17!115;UBERON:0002193!3.84e-16!112;UBERON:0002390!7.02e-15!102;UBERON:0003061!7.02e-15!102;UBERON:0004765!2.19e-14!101;UBERON:0001434!2.19e-14!101;UBERON:0003081!9.77e-12!216;UBERON:0002204!1.34e-10!167;UBERON:0000467!4.23e-10!625;UBERON:0000480!4.47e-10!626;UBERON:0000062!1.78e-09!511;UBERON:0000468!1.88e-09!659;UBERON:0000926!1.03e-08!448;UBERON:0004120!1.03e-08!448;UBERON:0006603!1.03e-08!448;UBERON:0000923!8.52e-07!604;UBERON:0005291!8.52e-07!604;UBERON:0006598!8.52e-07!604;UBERON:0002532!8.52e-07!604;UBERON:0002050!8.93e-07!605;UBERON:0005423!8.93e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.46e-33,76;UBERON:0001474,9.11e-31,82;UBERON:0004765,2.88e-28,90;UBERON:0002405,3.19e-28,93;UBERON:0002390,1.03e-25,98;UBERON:0003061,1.03e-25,98;UBERON:0001434,3.44e-25,100;UBERON:0002193,1.12e-24,108;UBERON:0003081,3.49e-20,203;UBERON:0002204,7.45e-15,167;UBERON:0000926,5.21e-14,315;UBERON:0004120,5.21e-14,315;UBERON:0006603,5.21e-14,315 | |||
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| ||
|short_description=p@chr10:73576943..73576992,- | |short_description=p@chr10:73576943..73576992,- | ||
}} | }} |
Latest revision as of 15:17, 23 July 2015
Short description: | p@chr10:73576943..73576992, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73576943..73576992, - |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.29e-46 | 59 |
monocyte | 4.29e-46 | 59 |
monoblast | 4.29e-46 | 59 |
promonocyte | 4.29e-46 | 59 |
defensive cell | 2.39e-45 | 48 |
phagocyte | 2.39e-45 | 48 |
macrophage dendritic cell progenitor | 7.59e-44 | 61 |
myeloid leukocyte | 1.58e-39 | 72 |
myeloid lineage restricted progenitor cell | 7.76e-39 | 66 |
classical monocyte | 1.92e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.92e-38 | 42 |
granulocyte monocyte progenitor cell | 6.30e-38 | 67 |
myeloid cell | 5.42e-19 | 108 |
common myeloid progenitor | 5.42e-19 | 108 |
nongranular leukocyte | 4.29e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 4.28e-13 | 120 |
leukocyte | 7.95e-13 | 136 |
macrophage | 3.05e-08 | 6 |
hematopoietic oligopotent progenitor cell | 2.52e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-07 | 161 |
hematopoietic stem cell | 4.53e-07 | 168 |
intermediate monocyte | 5.92e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.92e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.46e-33 | 76 |
bone element | 9.11e-31 | 82 |
skeletal element | 2.88e-28 | 90 |
immune system | 3.19e-28 | 93 |
hematopoietic system | 1.03e-25 | 98 |
blood island | 1.03e-25 | 98 |
skeletal system | 3.44e-25 | 100 |
hemolymphoid system | 1.12e-24 | 108 |
lateral plate mesoderm | 3.49e-20 | 203 |
musculoskeletal system | 7.45e-15 | 167 |
mesoderm | 5.21e-14 | 315 |
mesoderm-derived structure | 5.21e-14 | 315 |
presumptive mesoderm | 5.21e-14 | 315 |