FFCP PHASE1:Mm9::chr16:88563446..88563459,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54420 | |EntrezGene=54420 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1154 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z260,Q3UZK2 | |UniProt=Q9Z260,Q3UZK2 | ||
|association_with_transcript=-18bp_to_ENSMUST00000049697,NM_018778,uc007zuz.2_5end | |association_with_transcript=-18bp_to_ENSMUST00000049697,NM_018778,uc007zuz.2_5end | ||
|cluster_id=chr16:88563446..88563459,- | |||
|description=CAGE_peak_3_at_Cldn8_5end | |description=CAGE_peak_3_at_Cldn8_5end | ||
|id=chr16:88563446..88563459,- | |id=chr16:88563446..88563459,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!5.07e-12!16;UBERON:0001008!8.19e-12!17;UBERON:0005409!9.28e-12!59;UBERON:0000160!3.25e-11!43;UBERON:0002113!1.81e-10!14;UBERON:0003918!1.81e-10!14;UBERON:0005095!1.81e-10!14;UBERON:0007687!1.81e-10!14;UBERON:0002108!2.18e-08!16;UBERON:0001264!2.33e-08!12;UBERON:0003922!2.33e-08!12;UBERON:0002114!2.33e-08!12;UBERON:0003923!2.33e-08!12;UBERON:0003924!2.33e-08!12;UBERON:0003921!2.33e-08!12;UBERON:0001045!2.50e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,2.39e-16,18;UBERON:0002113,4.36e-16,14;UBERON:0003918,4.36e-16,14;UBERON:0011143,4.36e-16,14;UBERON:0005095,4.36e-16,14;UBERON:0007687,4.36e-16,14;UBERON:0001008,2.96e-15,19;UBERON:0000489,2.43e-11,21;UBERON:0001264,1.41e-10,12;UBERON:0000058,1.24e-07,7;UBERON:0002075,2.83e-07,19;UBERON:0000080,9.94e-07,4;UBERON:0005904,9.94e-07,4;UBERON:0006947,9.94e-07,4;UBERON:0002120,9.94e-07,4;UBERON:0004054,9.94e-07,4;UBERON:0004875,9.94e-07,4;UBERON:0004876,9.94e-07,4;UBERON:0005721,9.94e-07,4;UBERON:0005754,9.94e-07,4;UBERON:0007297,9.94e-07,4 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0,3.42042155021473,1.00812051903972,0,0,0,0,0.288851619751275,0.997407872150954,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,0,0,0,0,0,0.702222100658759,0,0,0,2.39433813620357,0,0,0,0.216491041011214,0,0.505524445014783,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,1.73126918545538,3.35898820647251,12.8888606801174,0.841767423545896,0.130120442962704,0.689706313300419,0,0.452114453507145,0.204109497453984,0,0.281105173679186,0.517406741478031,0.431135985865684,0.378212160335639,0.351902248327898,0,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,1.32167513193519,0,0.853153002140936,0.928946687441754,3.47942145569652,6.45387278794696,7.33847544688072,8.56015317506516,0,7.74085087202851,3.51869292320377,2.78539060857611,2.9244613067868,0.898819408654221,1.94524244887225,2.38969527905241,0.948339504765408,2.28497025219458,2.25415471346161,2.24016460629846,1.35766741017338,3.50679099451593,4.17361145020098,5.46157547524528,5.02395929092399,2.71473760627961,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0.37898282354097,0.162964976442026,0.169745085775188,0.938760993154008,0.167506257441816,0.238043640886014,0.195133647857799,0.788175720530955,0,0.318909537314974,0.327726629431476,0.518054945597687,0.289298117163023,0,0,15.2446924635901,6.62248191131358,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,1.31976098378028,2.65490276679926,0.971122544619926,1.81394134178851,2.45186603682668,2.06711325016541,2.76691633149535,0.775284879504663,1.81766864738753,3.20847640546249,2.84433082142234,5.27093042874994,3.09406629744561,0.680879211507576,0.720244376125241,1.29358683782755,1.07168517515796,1.59606210278046,1.96205699362278,2.63278432963394,0.913394847343798,0,0,6.17479514553893,1.15420377059036,1.61464426695906,1.44751019827574,2.50681922406587,2.1338316966858,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.813277868507395,1.18805874903981,0.627264888043406,0.218362563746178,0.539457385539283,0.743881101528023,1.57053565190418,2.07383957266869,6.21339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.608175645870493,0.308132871494482,0.389762468933385,0.179026695667481,0,0.240390899039938,0.147689527174577,0,0,0,0,0,0,2.49403421976732,0,0,0,3.86379188064381,1.31377732815827,1.46521299413812,0.214368379079066,4.01257683228291,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.943131706930381,1.03005658216871,0.320125762024346,0.631790158511746,1.90517476513229,0.811190281613988,0.964546102318525,0.412085900803307,0.441596760403192,0.685738504770831,0.177475806159338,0.476872379894642,0.290692833264657,0.752875043322645,0.423073039458382,0.73171189149109,1.05227884575137,0.950628796921032,0,0.830445126869219,0.492522411877817,0,0,0.192906610981141,0.749431733813838,1.16965804222704,1.07435527024149,0.191288332068843,0.661774257358546,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0,3.42042155021473,1.00812051903972,0,0,0,0,0.288851619751275,0.997407872150954,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,0,0,0,0,0,0.702222100658759,0,0,0,2.39433813620357,0,0,0,0.216491041011214,0,0.505524445014783,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,1.73126918545538,3.35898820647251,12.8888606801174,0.841767423545896,0.130120442962704,0.689706313300419,0,0.452114453507145,0.204109497453984,0,0.281105173679186,0.517406741478031,0.431135985865684,0.378212160335639,0.351902248327898,0,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,1.32167513193519,0,0.853153002140936,0.928946687441754,3.47942145569652,6.45387278794696,7.33847544688072,8.56015317506516,0,7.74085087202851,3.51869292320377,2.78539060857611,2.9244613067868,0.898819408654221,1.94524244887225,2.38969527905241,0.948339504765408,2.28497025219458,2.25415471346161,2.24016460629846,1.35766741017338,3.50679099451593,4.17361145020098,5.46157547524528,5.02395929092399,2.71473760627961,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0.37898282354097,0.162964976442026,0.169745085775188,0.938760993154008,0.167506257441816,0.238043640886014,0.195133647857799,0.788175720530955,0,0.318909537314974,0.327726629431476,0.518054945597687,0.289298117163023,0,0,15.2446924635901,6.62248191131358,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,1.31976098378028,2.65490276679926,0.971122544619926,1.81394134178851,2.45186603682668,2.06711325016541,2.76691633149535,0.775284879504663,1.81766864738753,3.20847640546249,2.84433082142234,5.27093042874994,3.09406629744561,0.680879211507576,0.720244376125241,1.29358683782755,1.07168517515796,1.59606210278046,1.96205699362278,2.63278432963394,0.913394847343798,0,0,6.17479514553893,1.15420377059036,1.61464426695906,1.44751019827574,2.50681922406587,2.1338316966858,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.813277868507395,1.18805874903981,0.627264888043406,0.218362563746178,0.539457385539283,0.743881101528023,1.57053565190418,2.07383957266869,6.21339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.608175645870493,0.308132871494482,0.389762468933385,0.179026695667481,0,0.240390899039938,0.147689527174577,0,0,0,0,0,0,2.49403421976732,0,0,0,3.86379188064381,1.31377732815827,1.46521299413812,0.214368379079066,4.01257683228291,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0.44449345560323,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.943131706930381,1.03005658216871,0.320125762024346,0.631790158511746,1.90517476513229,0.811190281613988,0.964546102318525,0.412085900803307,0.441596760403192,0.685738504770831,0.177475806159338,0.476872379894642,0.290692833264657,0.752875043322645,0.423073039458382,0.73171189149109,1.05227884575137,0.950628796921032,0,0.830445126869219,0.492522411877817,0,0,0.192906610981141,0.749431733813838,1.16965804222704,1.07435527024149,0.191288332068843,0.661774257358546,0 | ||
|short_description=p3@Cldn8 | |short_description=p3@Cldn8 | ||
}} | }} |
Latest revision as of 19:39, 25 September 2015
Short description: | p3@Cldn8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cldn8_5end |
Coexpression cluster: | MCL_coexpression_mm9:1154 |
Association with transcript: | -18bp_to_ENSMUST00000049697, NM_018778, uc007zuz.2_5end |
EntrezGene: | Cldn8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urinary system structure | 2.39e-16 | 18 |
kidney | 4.36e-16 | 14 |
kidney mesenchyme | 4.36e-16 | 14 |
upper urinary tract | 4.36e-16 | 14 |
kidney rudiment | 4.36e-16 | 14 |
kidney field | 4.36e-16 | 14 |
renal system | 2.96e-15 | 19 |
cavitated compound organ | 2.43e-11 | 21 |
pancreas | 1.41e-10 | 12 |
duct | 1.24e-07 | 7 |
viscus | 2.83e-07 | 19 |
mesonephros | 9.94e-07 | 4 |
duct of male reproductive system | 9.94e-07 | 4 |
male genital duct | 9.94e-07 | 4 |
pronephros | 9.94e-07 | 4 |
internal male genitalia | 9.94e-07 | 4 |
nephrogenic cord | 9.94e-07 | 4 |
urogenital ridge | 9.94e-07 | 4 |
pronephric mesoderm | 9.94e-07 | 4 |
rostral part of nephrogenic cord | 9.94e-07 | 4 |
presumptive pronephric mesoderm | 9.94e-07 | 4 |