FFCP PHASE1:Hg19::chr11:122929699..122929702,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30353 | |HGNC=30353 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000384390_5end | |association_with_transcript=0bp_to_ENST00000384390_5end | ||
|cluster_id=chr11:122929699..122929702,- | |||
|description=CAGE_peak_1_at_SNORD14D_5end | |description=CAGE_peak_1_at_SNORD14D_5end | ||
|id=chr11:122929699..122929702,- | |id=chr11:122929699..122929702,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.55e-15;32!CL:0002328;3.28e-12;3!CL:0002202;1.09e-10;9!CL:0002632;1.09e-10;9!CL:0000192;2.46e-09;43!CL:0002594;1.01e-08;4!CL:0002368;2.85e-07;13!CL:0002595;3.15e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.46e-16,32;CL:0002328,3.29e-12,3;CL:0000192,2.13e-11,43;CL:0000514,2.13e-11,43;CL:0002202,1.10e-10,9;CL:0002632,1.10e-10,9;CL:0002594,1.17e-08,4;CL:0000187,2.72e-08,55;CL:0000680,1.01e-07,58;CL:0000056,1.01e-07,58;CL:0000355,1.01e-07,58;CL:0002368,2.85e-07,13;CL:0002595,3.12e-07,5;CL:0000393,3.30e-07,61;CL:0000211,3.30e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.46e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001981!3.55e-10!60;UBERON:0007500!3.55e-10!60;UBERON:0004537!3.55e-10!60;UBERON:0006965!3.55e-10!60;UBERON:0001637!1.68e-09!42;UBERON:0003509!1.68e-09!42;UBERON:0004572!1.68e-09!42;UBERON:0000055!7.41e-08!69;UBERON:0004573!2.32e-07!33;UBERON:0004571!2.32e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.80e-17;42!UBERON:0003509;7.80e-17;42!UBERON:0004572;7.80e-17;42!UBERON:0007500;8.83e-15;56!UBERON:0001981;8.83e-15;56!UBERON:0004537;8.83e-15;56!UBERON:0004573;2.85e-12;33!UBERON:0004571;2.85e-12;33!UBERON:0004815;3.28e-12;3!UBERON:0002031;3.28e-12;3!UBERON:0000055;3.01e-11;65!UBERON:0001310;1.01e-08;4!UBERON:0000025;2.76e-08;93!UBERON:0000490;7.79e-08;33!UBERON:0002185;1.78e-07;5!UBERON:0003834;3.15e-07;5!UBERON:0001533;3.15e-07;5!UBERON:0002049;4.21e-07;75!UBERON:0007798;4.21e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.64e-23,42;UBERON:0003509,2.64e-23,42;UBERON:0004572,2.64e-23,42;UBERON:0007500,1.10e-21,59;UBERON:0001981,1.10e-21,59;UBERON:0004537,1.10e-21,59;UBERON:0006965,1.10e-21,59;UBERON:0000055,4.12e-18,68;UBERON:0004573,2.08e-15,33;UBERON:0004571,2.08e-15,33;UBERON:0002049,4.06e-15,78;UBERON:0007798,4.06e-15,78;UBERON:0004872,6.77e-14,83;UBERON:0001009,2.17e-12,112;UBERON:0000490,2.77e-12,148;UBERON:0004815,3.29e-12,3;UBERON:0002031,3.29e-12,3;UBERON:0002329,3.29e-12,71;UBERON:0003059,3.29e-12,71;UBERON:0007282,3.29e-12,71;UBERON:0004290,3.29e-12,71;UBERON:0009618,3.29e-12,71;UBERON:0003077,5.58e-12,72;UBERON:0007285,5.58e-12,72;UBERON:0007524,9.32e-12,73;UBERON:0004535,1.10e-11,109;UBERON:0000486,4.04e-11,83;UBERON:0007503,9.92e-11,78;UBERON:0001134,1.28e-09,62;UBERON:0002036,1.28e-09,62;UBERON:0003082,1.28e-09,62;UBERON:0003914,2.11e-09,117;UBERON:0002385,3.25e-09,64;UBERON:0001015,3.25e-09,64;UBERON:0000383,3.25e-09,64;UBERON:0001310,1.17e-08,4;UBERON:0002185,1.79e-07,5;UBERON:0003498,2.22e-07,5;UBERON:0005985,2.22e-07,5;UBERON:0003834,3.12e-07,5;UBERON:0001533,3.12e-07,5;UBERON:0000485,5.31e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0.164201178899891,0,0,0.383829398097213,0.154816123316076,9.19421224478927,20.482002476921,5.9160641626686,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,1.57204305099666,0.205601498999509,0,0.651844533267181,0,0,0.111410456885174,0.589211814949674,0,0,0,0,0,0,0.579606171470105,0.296573126324121,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0.301150238155546,0.255973222308837,0,0,0.821127996921047,0,0.267440195783507,0.724122019413995,0,0,0,0,1.50401373190767,0.289693037921647,0,0.973269740605272,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0.79504962946682,4.30117297553062,0,1.13061588384802,0,0,3.76190939766259,0,0,0,0,1.52054421143703,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0.112611480483322,13.7984973719295,10.4419222552494,0.366403487860815,1.31780417436063,0,0,0,0,0.264818361626438,2.29469296599051,1.06400514659507,0.560677600142307,0,0,0,0,0.490385709340376,0,0,0,0.312160076830321,2.85235910772225,0.448346041655403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89694817844431,0.85422955527427,0.211931901159562,0,0.103052529238439,0,0,0,0.0974370051611986,1.00973509697646,0,0,1.77504796258307,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0,10.9514672630871,0,29.0083334840209,0,0,0,0.168584690078102,0,0,0.217879444092406,0.237270619111097,0,0,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0,0.219500570817251,33.7205259772859,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,28.3703182582256,0,0.176096868026452,0,0,0,0,0,0,34.214489204541,0.205654985406647,0,0.285826432630578,0,0,0,0.129271715757778,0,56.635284421252,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0,0.542621605391443,0,0.325736184293735,0,0,0.301439377059586,0,0,1.2162378064119,0,0,0,0,0,0,0.61642896765115,0,0.112085143993527,0.197030760201927,0,0.385029108839245,0,0,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0.24538298343828,0,0,0.207970861530807,0,0,0,2.70851489754947,0,0,0,1.84369168541703,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.804269605718038,1.48418066444991,0.308419387605311,0.177561725313127,0,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0.114814448164607,0.182091168006717,0.262248829918848,0,0,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0.462145851343933,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,2.7881490806424,0,2.66153015158511,0.869932992075073,0.9266210955196,1.28812398067792,0,0,0,0.255897791311334,0,0.636406495851874,4.70969184119538,0,0,0,3.841467149893,4.75530963519025,0.421258456238981,0,0,14.7910205459458,0.136499911407986,0.141405431953713,15.821136326834,14.8868642757454,0,1.31535265576129,0,0,1.21746226177622,6.8161169581945,0.845086807596724,0,0,3.5667105148125,0,0.211107635297664,0,0,0,0.577332676353072,37.5369274300041,44.6453037931423,0.470719003883896,0,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.213425530045242,0.318852545457645,0,0,0.211673582723883,0,0,0,0.156679895773023,2.50634477090067,0.169291777801603,0.321176150207399,0.403599414382095,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0,0,0.222886768554957,0.568272293612826,0,0,0,0,0.281338832821026,0,0.16480387422676,0,0,0,0,0,0.615424027305347,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0.508507300585533,0.472775363535873,0.689486746482929,0.291604613383254,0.347249989866585,0,0,0,0.331737779793674,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0.217294743844016,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0,0,0.189753732724185,0,0.421996129056054,0,0,0,0,0.796118080530053,0,3.85477467284809,1.23563938946503,0.522109747527277,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0.199679000498991,0,1.11585728720936,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0.169346664131569,0,0.272406812223151,0.160753148465019,0.137539436597234,0,0,0,0.121499113316049,0,0,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,0.340776043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| ||
|short_description=p1@SNORD14D | |short_description=p1@SNORD14D | ||
}} | }} |
Latest revision as of 08:59, 16 September 2015
Short description: | p1@SNORD14D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORD14D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000384390_5end |
EntrezGene: | NA |
HGNC: | 30353 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.46e-16 | 32 |
bronchial epithelial cell | 3.29e-12 | 3 |
smooth muscle cell | 2.13e-11 | 43 |
smooth muscle myoblast | 2.13e-11 | 43 |
epithelial cell of tracheobronchial tree | 1.10e-10 | 9 |
epithelial cell of lower respiratory tract | 1.10e-10 | 9 |
smooth muscle cell of the umbilical artery | 1.17e-08 | 4 |
muscle cell | 2.72e-08 | 55 |
muscle precursor cell | 1.01e-07 | 58 |
myoblast | 1.01e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.01e-07 | 58 |
respiratory epithelial cell | 2.85e-07 | 13 |
smooth muscle cell of the subclavian artery | 3.12e-07 | 5 |
electrically responsive cell | 3.30e-07 | 61 |
electrically active cell | 3.30e-07 | 61 |