FFCP PHASE1:Hg19::chr11:14666236..14666249,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5140 | |EntrezGene=5140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8779 | |HGNC=8779 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=430bp_to_ENST00000534317_5end | |association_with_transcript=430bp_to_ENST00000534317_5end | ||
|cluster_id=chr11:14666236..14666249,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_10_at_PDE3B_5end | |description=CAGE_peak_10_at_PDE3B_5end | ||
|id=chr11:14666236..14666249,+ | |id=chr11:14666236..14666249,+ | ||
|ontology_enrichment_celltype=CL:0000791!6.56e-27!18;CL:0000789!6.56e-27!18;CL:0002420!6.56e-27!18;CL:0002419!6.56e-27!18;CL:0000790!6.56e-27!18;CL:0002087!1.43e-21!119;CL:0000738!5.33e-21!140;CL:0000084!5.22e-20!25;CL:0000827!5.22e-20!25;CL:0000542!9.39e-19!53;CL:0000051!9.39e-19!53;CL:0000037!3.09e-18!172;CL:0000566!3.09e-18!172;CL:0000838!7.89e-18!52;CL:0000988!2.55e-16!182;CL:0000625!6.26e-16!11;CL:0002032!8.90e-16!165;CL:0000837!8.90e-16!165;CL:0002031!1.01e-15!124;CL:0000624!1.12e-11!6 | |ontology_enrichment_celltype=CL:0000791!6.56e-27!18;CL:0000789!6.56e-27!18;CL:0002420!6.56e-27!18;CL:0002419!6.56e-27!18;CL:0000790!6.56e-27!18;CL:0002087!1.43e-21!119;CL:0000738!5.33e-21!140;CL:0000084!5.22e-20!25;CL:0000827!5.22e-20!25;CL:0000542!9.39e-19!53;CL:0000051!9.39e-19!53;CL:0000037!3.09e-18!172;CL:0000566!3.09e-18!172;CL:0000838!7.89e-18!52;CL:0000988!2.55e-16!182;CL:0000625!6.26e-16!11;CL:0002032!8.90e-16!165;CL:0000837!8.90e-16!165;CL:0002031!1.01e-15!124;CL:0000624!1.12e-11!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.98e-56;18!CL:0000789;1.98e-56;18!CL:0002419;1.98e-56;18!CL:0000084;8.26e-40;25!CL:0000625;5.26e-38;11!CL:0000624;1.92e-23;6!CL:0000226;1.94e-17;3!CL:0000842;1.94e-17;3!CL:0000623;7.68e-17;3!CL:0000542;3.23e-14;53!CL:0000815;5.99e-12;2!CL:0000792;5.99e-12;2!CL:0002677;5.99e-12;2!CL:0000898;3.00e-08;3!CL:0002087;1.07e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.32e-57,18;CL:0000789,9.32e-57,18;CL:0002420,9.32e-57,18;CL:0002419,9.32e-57,18;CL:0000790,9.32e-57,18;CL:0000084,4.83e-40,25;CL:0000827,4.83e-40,25;CL:0000625,2.39e-38,11;CL:0000838,4.52e-30,52;CL:0000542,1.98e-29,53;CL:0000051,1.98e-29,53;CL:0000624,1.93e-23,6;CL:0002087,7.66e-20,115;CL:0000226,2.00e-17,3;CL:0000842,2.00e-17,3;CL:0000623,3.89e-17,3;CL:0000825,3.89e-17,3;CL:0000738,4.88e-16,136;CL:0002031,1.48e-13,120;CL:0000037,4.58e-12,168;CL:0000815,5.53e-12,2;CL:0000792,5.53e-12,2;CL:0002677,5.53e-12,2;CL:0000988,3.30e-11,177;CL:0002032,4.75e-09,161;CL:0000837,4.75e-09,161;CL:0000898,2.84e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.98e-56;18!CL:0000051;3.23e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.74e-07!7;UBERON:0002390!2.83e-07!102;UBERON:0003061!2.83e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,1.20326668482085,1.08505435357926,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,1.17447437874188,0,0,0,0,5.31116379307349,4.32311839024081,4.11202997999018,1.33749196312542,3.58514493296949,4.73447805734733,9.74133642039557,1.00269411196656,1.47302953737419,2.21533894583621,1.62482318259009,0.384273959177026,0.650296737799391,0.822189523018381,1.10540007114339,1.15921234294021,5.78317596332036,6.1534390460634,2.09071047609954,0.453237370790265,0.766440987203842,0.68725489096526,2.78321661221453,1.91139248594458,1.95325036156926,3.8018081777935,1.50575119077773,1.27986611154418,1.24930726552346,0.710331756132051,0,1.41124720257313,1.60464117470104,6.95157138637435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,3.15249216323084,1.94064817373566,1.66845947163673,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,2.5885704098234,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0,0,0.648473311192717,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.886642856860642,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0.306345576763462,0.983617892129413,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.0645889098360061,0.372448285775147,0,0,0,0,0,0.202056159043763,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,1.20326668482085,1.08505435357926,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,1.17447437874188,0,0,0,0,5.31116379307349,4.32311839024081,4.11202997999018,1.33749196312542,3.58514493296949,4.73447805734733,9.74133642039557,1.00269411196656,1.47302953737419,2.21533894583621,1.62482318259009,0.384273959177026,0.650296737799391,0.822189523018381,1.10540007114339,1.15921234294021,5.78317596332036,6.1534390460634,2.09071047609954,0.453237370790265,0.766440987203842,0.68725489096526,2.78321661221453,1.91139248594458,1.95325036156926,3.8018081777935,1.50575119077773,1.27986611154418,1.24930726552346,0.710331756132051,0,1.41124720257313,1.60464117470104,6.95157138637435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,3.15249216323084,1.94064817373566,1.66845947163673,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,2.5885704098234,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0,0,0.648473311192717,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.886642856860642,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0.306345576763462,0.983617892129413,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.0645889098360061,0.372448285775147,0,0,0,0,0,0.202056159043763,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p10@PDE3B | |short_description=p10@PDE3B | ||
}} | }} |
Latest revision as of 21:57, 16 September 2015
Short description: | p10@PDE3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PDE3B_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 430bp_to_ENST00000534317_5end |
EntrezGene: | PDE3B |
HGNC: | 8779 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.32e-57 | 18 |
alpha-beta T cell | 9.32e-57 | 18 |
immature T cell | 9.32e-57 | 18 |
mature T cell | 9.32e-57 | 18 |
immature alpha-beta T cell | 9.32e-57 | 18 |
T cell | 4.83e-40 | 25 |
pro-T cell | 4.83e-40 | 25 |
CD8-positive, alpha-beta T cell | 2.39e-38 | 11 |
lymphoid lineage restricted progenitor cell | 4.52e-30 | 52 |
lymphocyte | 1.98e-29 | 53 |
common lymphoid progenitor | 1.98e-29 | 53 |
CD4-positive, alpha-beta T cell | 1.93e-23 | 6 |
nongranular leukocyte | 7.66e-20 | 115 |
single nucleate cell | 2.00e-17 | 3 |
mononuclear cell | 2.00e-17 | 3 |
natural killer cell | 3.89e-17 | 3 |
pro-NK cell | 3.89e-17 | 3 |
leukocyte | 4.88e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 1.48e-13 | 120 |
hematopoietic stem cell | 4.58e-12 | 168 |
regulatory T cell | 5.53e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.53e-12 | 2 |
naive regulatory T cell | 5.53e-12 | 2 |
hematopoietic cell | 3.30e-11 | 177 |
hematopoietic oligopotent progenitor cell | 4.75e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.75e-09 | 161 |
naive T cell | 2.84e-08 | 3 |