FFCP PHASE1:Hg19::chr12:102707060..102707072,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:102707060..102707072,+ | |||
|description=CAGE_peak_at_chr12:102707060..102707072,+ | |description=CAGE_peak_at_chr12:102707060..102707072,+ | ||
|id=chr12:102707060..102707072,+ | |id=chr12:102707060..102707072,+ | ||
|ontology_enrichment_celltype=CL:0002541!9.68e-15!3;CL:0000039!1.28e-11!7;CL:0000586!1.28e-11!7;CL:0002322!1.67e-08!5 | |ontology_enrichment_celltype=CL:0002541!9.68e-15!3;CL:0000039!1.28e-11!7;CL:0000586!1.28e-11!7;CL:0002322!1.67e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;7.39e-35;7!CL:0000586;7.39e-35;7!CL:1000415;4.02e-09;2!CL:0000054;4.70e-09;2!CL:0000137;4.70e-09;2!CL:0000092;4.70e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.81e-35,7;CL:0000586,8.81e-35,7;CL:1000415,4.02e-09,2;CL:0000054,4.34e-09,2;CL:0000137,4.34e-09,2;CL:0000092,4.34e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.55e-14;10!UBERON:0005564;2.55e-14;10 | |||
|ontology_enrichment_disease=DOID:305!1.48e-16!106;DOID:0050687!1.50e-13!143;DOID:162!1.20e-12!235;DOID:14566!3.04e-12!239;DOID:1036!3.48e-10!8;DOID:3095!1.31e-07!22;DOID:2994!1.31e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.14e-24;22!DOID:2994;1.14e-24;22!DOID:1036;9.91e-18;8!DOID:0060085;8.85e-17;1!DOID:3165;8.85e-17;1!DOID:0060121;8.85e-17;1!DOID:2438;8.85e-17;1!DOID:4418;8.85e-17;1!DOID:200;4.70e-09;2!DOID:4305;4.70e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.27e-24,22;DOID:2994,1.27e-24,22;DOID:1036,8.34e-18,8;DOID:0060085,7.57e-17,1;DOID:3165,7.57e-17,1;DOID:0060121,7.57e-17,1;DOID:2438,7.57e-17,1;DOID:4418,7.57e-17,1;DOID:162,7.82e-10,235;DOID:14566,1.33e-09,239;DOID:200,4.34e-09,2;DOID:4305,4.34e-09,2;DOID:305,1.34e-08,106;DOID:0050687,7.74e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000476!9.68e-15!3;UBERON:0000920!9.68e-15!3;UBERON:0003124!6.82e-11!7;UBERON:0001737!3.86e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.91e-18;8!UBERON:0003135;4.47e-13;11!UBERON:0000991;4.05e-07;21!UBERON:0003101;8.10e-07;22!UBERON:0000079;8.10e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.05e-17,8;UBERON:0003135,4.66e-13,11;UBERON:0000991,4.14e-07,21;UBERON:0009196,4.14e-07,21;UBERON:0009117,4.14e-07,21;UBERON:0005564,4.14e-07,21;UBERON:0004176,8.27e-07,22;UBERON:0003101,8.27e-07,22;UBERON:0000079,8.27e-07,22 | |||
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|short_description=p@chr12:102707060..102707072,+ | |short_description=p@chr12:102707060..102707072,+ | ||
}} | }} |
Latest revision as of 04:06, 24 July 2015
Short description: | p@chr12:102707060..102707072, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:102707060..102707072, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.81e-35 | 7 |
germ cell | 8.81e-35 | 7 |
epithelial cell of gall bladder | 4.02e-09 | 2 |
bone matrix secreting cell | 4.34e-09 | 2 |
osteocyte | 4.34e-09 | 2 |
osteoclast | 4.34e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.05e-17 | 8 |
male reproductive organ | 4.66e-13 | 11 |
gonad | 4.14e-07 | 21 |
indifferent external genitalia | 4.14e-07 | 21 |
indifferent gonad | 4.14e-07 | 21 |
gonad primordium | 4.14e-07 | 21 |
external genitalia | 8.27e-07 | 22 |
male organism | 8.27e-07 | 22 |
male reproductive system | 8.27e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.27e-24 | 22 |
germ cell cancer | 1.27e-24 | 22 |
chronic leukemia | 8.34e-18 | 8 |
organ system benign neoplasm | 7.57e-17 | 1 |
skin benign neoplasm | 7.57e-17 | 1 |
integumentary system benign neoplasm | 7.57e-17 | 1 |
dermis tumor | 7.57e-17 | 1 |
cutaneous fibrous histiocytoma | 7.57e-17 | 1 |
cancer | 7.82e-10 | 235 |
disease of cellular proliferation | 1.33e-09 | 239 |
giant cell tumor | 4.34e-09 | 2 |
bone giant cell tumor | 4.34e-09 | 2 |
carcinoma | 1.34e-08 | 106 |
cell type cancer | 7.74e-08 | 143 |