FFCP PHASE1:Mm9::chr17:75169401..75169411,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=284 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:75169401..75169411,+ | |||
|description=CAGE_peak_at_chr17:75169401..75169411,+ | |description=CAGE_peak_at_chr17:75169401..75169411,+ | ||
|id=chr17:75169401..75169411,+ | |id=chr17:75169401..75169411,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.01e-12,1;CL:0000791,6.65e-12,9;CL:0000789,6.65e-12,9;CL:0002420,6.65e-12,9;CL:0002419,6.65e-12,9;CL:0000790,6.65e-12,9;CL:0000084,7.37e-10,11;CL:0000827,7.37e-10,11;CL:0000838,4.33e-09,12;CL:0000542,1.95e-08,13;CL:0000051,1.95e-08,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.20e-21!23;UBERON:0000974!1.20e-21!23;UBERON:0004807!1.20e-21!23;UBERON:0005058!1.20e-21!23;UBERON:0003351!1.20e-21!23;UBERON:0009113!1.20e-21!23;UBERON:0003295!1.20e-21!23;UBERON:0009722!1.20e-21!23;UBERON:0005562!1.20e-21!23;UBERON:0007690!1.20e-21!23;UBERON:0004177!9.27e-21!29;UBERON:0006562!1.43e-20!24;UBERON:0003408!1.43e-20!24;UBERON:0001557!1.43e-20!24;UBERON:0001042!1.43e-20!24;UBERON:0008814!1.43e-20!24;UBERON:0009145!1.43e-20!24;UBERON:0000072!8.01e-18!27;UBERON:0002193!2.91e-17!48;UBERON:0002390!9.48e-17!45;UBERON:0003061!9.48e-17!45;UBERON:0000063!1.43e-14!35;UBERON:0000065!1.76e-13!41;UBERON:0001004!4.73e-13!42;UBERON:0002405!4.35e-10!70;UBERON:0005057!7.77e-10!51;UBERON:0000077!8.61e-09!97;UBERON:0001041!1.19e-08!92;UBERON:0004921!3.50e-08!126;UBERON:0004185!3.50e-08!126;UBERON:0001007!6.04e-08!128;UBERON:0001555!6.04e-08!128;UBERON:0007026!6.04e-08!128;UBERON:0003081!8.93e-08!88;UBERON:0004119!1.02e-07!130;UBERON:0000925!1.02e-07!130;UBERON:0006595!1.02e-07!130;UBERON:0003929!9.46e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.59e-12,1;UBERON:0001097,2.59e-12,1;UBERON:0003968,2.59e-12,1;UBERON:0001467,2.59e-12,1;UBERON:0002370,5.79e-08,23;UBERON:0000974,5.79e-08,23;UBERON:0004807,5.79e-08,23;UBERON:0005058,5.79e-08,23;UBERON:0003351,5.79e-08,23;UBERON:0009113,5.79e-08,23;UBERON:0003295,5.79e-08,23;UBERON:0009722,5.79e-08,23;UBERON:0005562,5.79e-08,23;UBERON:0007690,5.79e-08,23;UBERON:0007811,9.32e-08,36;UBERON:0006562,1.20e-07,24;UBERON:0003408,1.20e-07,24;UBERON:0001557,1.20e-07,24;UBERON:0001042,1.20e-07,24;UBERON:0008814,1.20e-07,24;UBERON:0009145,1.20e-07,24;UBERON:0000072,7.81e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.985521055061667,0,0.171217968225505,0,11.1280474455284,0,0,0.202475267389826,0,0.788655413395594,0.822686601634433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,1.05220927943237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.457556346413045,0.169978429993855,0,0.138199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.405450430580328,0.513554785824136,1.03936658382236,0.537080087002444,0,0.600977247599844,1.03382669022204,0.807731599585181,0.990688486514998,0.403304740547362,0.38983152295901,0.673482891482306,1.05189211963412,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.985521055061667,0,0.171217968225505,0,11.1280474455284,0,0,0.202475267389826,0,0.788655413395594,0.822686601634433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62681071005672,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,1.05220927943237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.457556346413045,0.169978429993855,0,0.138199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.405450430580328,0.513554785824136,1.03936658382236,0.537080087002444,0,0.600977247599844,1.03382669022204,0.807731599585181,0.990688486514998,0.403304740547362,0.38983152295901,0.673482891482306,1.05189211963412,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:75169401..75169411,+ | |short_description=p@chr17:75169401..75169411,+ | ||
}} | }} |
Latest revision as of 08:23, 5 August 2015
Short description: | p@chr17:75169401..75169411, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:75169401..75169411, + |
Coexpression cluster: | MCL_coexpression_mm9:284 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.01e-12 | 1 |
mature alpha-beta T cell | 6.65e-12 | 9 |
alpha-beta T cell | 6.65e-12 | 9 |
immature T cell | 6.65e-12 | 9 |
mature T cell | 6.65e-12 | 9 |
immature alpha-beta T cell | 6.65e-12 | 9 |
T cell | 7.37e-10 | 11 |
pro-T cell | 7.37e-10 | 11 |
lymphoid lineage restricted progenitor cell | 4.33e-09 | 12 |
lymphocyte | 1.95e-08 | 13 |
common lymphoid progenitor | 1.95e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.59e-12 | 1 |
axillary lymph node | 2.59e-12 | 1 |
peripheral lymph node | 2.59e-12 | 1 |
shoulder | 2.59e-12 | 1 |
thymus | 5.79e-08 | 23 |
neck | 5.79e-08 | 23 |
respiratory system epithelium | 5.79e-08 | 23 |
hemolymphoid system gland | 5.79e-08 | 23 |
pharyngeal epithelium | 5.79e-08 | 23 |
thymic region | 5.79e-08 | 23 |
pharyngeal gland | 5.79e-08 | 23 |
entire pharyngeal arch endoderm | 5.79e-08 | 23 |
thymus primordium | 5.79e-08 | 23 |
early pharyngeal endoderm | 5.79e-08 | 23 |
craniocervical region | 9.32e-08 | 36 |
pharynx | 1.20e-07 | 24 |
gland of gut | 1.20e-07 | 24 |
upper respiratory tract | 1.20e-07 | 24 |
chordate pharynx | 1.20e-07 | 24 |
pharyngeal arch system | 1.20e-07 | 24 |
pharyngeal region of foregut | 1.20e-07 | 24 |
segment of respiratory tract | 7.81e-07 | 27 |