FFCP PHASE1:Hg19::chr12:69004826..69004831,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5908 | |EntrezGene=5908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9857 | |HGNC=9857 | ||
|TSSclassifier=strong | |||
|UniProt=F5H077 | |UniProt=F5H077 | ||
|association_with_transcript=85bp_to_ENST00000545720_5end | |association_with_transcript=85bp_to_ENST00000545720_5end | ||
|cluster_id=chr12:69004826..69004831,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_6_at_RAP1B_5end | |description=CAGE_peak_6_at_RAP1B_5end | ||
|id=chr12:69004826..69004831,+ | |id=chr12:69004826..69004831,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.06e-30!42;CL:0000738!1.19e-29!140;CL:0000860!3.44e-29!45;CL:0002087!4.83e-28!119;CL:0002031!8.60e-26!124;CL:0000037!1.24e-24!172;CL:0000566!1.24e-24!172;CL:0002032!1.28e-22!165;CL:0000837!1.28e-22!165;CL:0002009!3.40e-22!65;CL:0000766!4.16e-22!76;CL:0000988!6.99e-22!182;CL:0002194!2.44e-20!63;CL:0000576!2.44e-20!63;CL:0000040!2.44e-20!63;CL:0000559!2.44e-20!63;CL:0000557!3.52e-20!71;CL:0000839!5.53e-18!70;CL:0000763!9.07e-16!112;CL:0000049!9.07e-16!112;CL:0002393!6.45e-13!9;CL:0002397!6.45e-13!9;CL:0000134!1.17e-10!358;CL:0000219!4.41e-10!390;CL:0002320!6.25e-10!365;CL:0000791!1.39e-07!18;CL:0000789!1.39e-07!18;CL:0002420!1.39e-07!18;CL:0002419!1.39e-07!18;CL:0000790!1.39e-07!18;CL:0000838!4.35e-07!52;CL:0000542!7.83e-07!53;CL:0000051!7.83e-07!53 | |ontology_enrichment_celltype=CL:0002057!1.06e-30!42;CL:0000738!1.19e-29!140;CL:0000860!3.44e-29!45;CL:0002087!4.83e-28!119;CL:0002031!8.60e-26!124;CL:0000037!1.24e-24!172;CL:0000566!1.24e-24!172;CL:0002032!1.28e-22!165;CL:0000837!1.28e-22!165;CL:0002009!3.40e-22!65;CL:0000766!4.16e-22!76;CL:0000988!6.99e-22!182;CL:0002194!2.44e-20!63;CL:0000576!2.44e-20!63;CL:0000040!2.44e-20!63;CL:0000559!2.44e-20!63;CL:0000557!3.52e-20!71;CL:0000839!5.53e-18!70;CL:0000763!9.07e-16!112;CL:0000049!9.07e-16!112;CL:0002393!6.45e-13!9;CL:0002397!6.45e-13!9;CL:0000134!1.17e-10!358;CL:0000219!4.41e-10!390;CL:0002320!6.25e-10!365;CL:0000791!1.39e-07!18;CL:0000789!1.39e-07!18;CL:0002420!1.39e-07!18;CL:0002419!1.39e-07!18;CL:0000790!1.39e-07!18;CL:0000838!4.35e-07!52;CL:0000542!7.83e-07!53;CL:0000051!7.83e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.24e-28;6!CL:0002397;1.24e-28;6!CL:0000767;8.38e-21;3!CL:0000623;2.01e-20;3!CL:0000094;7.66e-14;8!CL:0000576;3.78e-12;48!CL:0000766;2.71e-11;69!CL:0000875;2.77e-10;3!CL:0002396;2.77e-10;3!CL:0000081;4.17e-10;11!CL:0000226;5.00e-10;3!CL:0000842;5.00e-10;3!CL:0000167;5.97e-08;1!CL:0000164;5.97e-08;1!CL:0000502;5.97e-08;1!CL:0000172;5.97e-08;1!CL:0002581;5.97e-08;1!CL:0000173;5.97e-08;1!CL:0002087;1.73e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,7.45e-37,9;CL:0002397,7.45e-37,9;CL:0000738,4.27e-26,136;CL:0000860,1.80e-24,42;CL:0002057,1.80e-24,42;CL:0000766,2.46e-23,72;CL:0000767,2.24e-21,3;CL:0000473,4.19e-21,48;CL:0000234,4.19e-21,48;CL:0000623,7.12e-21,3;CL:0000825,7.12e-21,3;CL:0000037,2.80e-20,168;CL:0002087,4.33e-19,115;CL:0000988,5.10e-19,177;CL:0002009,1.88e-18,61;CL:0002032,1.48e-17,161;CL:0000837,1.48e-17,161;CL:0000557,1.39e-16,67;CL:0000763,1.79e-16,108;CL:0000049,1.79e-16,108;CL:0002194,2.19e-16,59;CL:0000576,2.19e-16,59;CL:0000040,2.19e-16,59;CL:0000559,2.19e-16,59;CL:0002031,3.96e-16,120;CL:0000839,2.05e-14,66;CL:0000094,4.01e-14,8;CL:0000081,2.63e-10,11;CL:0000875,2.65e-10,3;CL:0002396,2.65e-10,3;CL:0000226,4.79e-10,3;CL:0000842,4.79e-10,3;CL:0002581,4.71e-08,1;CL:0000134,4.85e-08,354;CL:0000167,5.40e-08,1;CL:0000164,5.40e-08,1;CL:0000502,5.40e-08,1;CL:0000172,5.40e-08,1;CL:0000173,5.40e-08,1;CL:0002351,5.40e-08,1;CL:0002320,8.66e-08,361;CL:0000034,5.73e-07,441;CL:0000219,6.66e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.35e-18;42!CL:0002351;5.97e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;5.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.40e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-19!102;UBERON:0003061!1.12e-19!102;UBERON:0002371!1.85e-18!80;UBERON:0001474!6.47e-18!86;UBERON:0002193!4.10e-17!112;UBERON:0004765!7.22e-14!101;UBERON:0001434!7.22e-14!101;UBERON:0002405!4.17e-13!115;UBERON:0002384!5.86e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.51e-14,76;UBERON:0002390,3.61e-14,98;UBERON:0003061,3.61e-14,98;UBERON:0001474,4.28e-13,82;UBERON:0002193,1.40e-12,108;UBERON:0004765,1.05e-11,90;UBERON:0002405,3.02e-11,93;UBERON:0001434,2.79e-10,100;UBERON:0002384,1.91e-07,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0.204000691244253,0,0,0,0,0,0,0,1.96682138424452,1.91914699048606,2.32224184974114,0,0,0,0.154934401160603,0.142169232487422,0.587200878669695,7.20194031091441,6.01633342410425,7.59538047505481,0,0,0,0.436194716338694,0.377875943688809,0.727752183563449,0.232429036905685,0,1.23882548358041,0.575384784644301,0,1.18241114944293,1.03423704220986,0.645484683583826,1.35426486594342,0,0.272906150057846,0,0.918251677112708,0.320929027076094,1.27867425159808,0,0.199463657621632,0,0,0.56738522469114,1.24564449799115,0.251248665256743,0.521482918420201,0.65156653411535,0.605399502633369,0.736555271975129,0.632924774881769,0.845021145247767,1.06302149982522,1.88692780957538,0.673971786878971,0.300353785683013,0.48217676009124,2.28010194992999,0.79566670879636,2.37463399894024,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0.382273228125229,0,1.12101712596307,0,0.590129310341499,1.17903228824749,1.02800749499755,0,0.32592226663359,0.946895611469467,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0,1.04535523804977,0.226618685395132,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0,0.80642697289893,0.534880391567015,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0.506328996723799,0.0974370051611986,0.252433774244115,0,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.57624608161542,1.94064817373566,1.41177339907723,0,0,0,0,0.637938751653163,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,2.15714200818617,0.320182673410333,0,0,0,0,0.460385919864187,0,0,0,0,1.48418066444991,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0.476809736941136,0.210998064528027,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0.176512253383001,0,0.137041924646751,0,0,0,0,0,0,0,0.343609788497747,0.343189995723929,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.169346664131569,0,0,0.160753148465019,0,0,0.674921674654501,1.5476039091159,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0,0,0,0,0,0,0,0.415045904808692,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0.899606224327209,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.39997479170986,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0.135939465953663,0,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0.691259661814092,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0,0.121917924982269,0.647428837187895,0,0,0,0,0,0,0,0,0.150962843566674,0,0,1.88126918544609,0,1.41405928260976,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0.204000691244253,0,0,0,0,0,0,0,1.96682138424452,1.91914699048606,2.32224184974114,0,0,0,0.154934401160603,0.142169232487422,0.587200878669695,7.20194031091441,6.01633342410425,7.59538047505481,0,0,0,0.436194716338694,0.377875943688809,0.727752183563449,0.232429036905685,0,1.23882548358041,0.575384784644301,0,1.18241114944293,1.03423704220986,0.645484683583826,1.35426486594342,0,0.272906150057846,0,0.918251677112708,0.320929027076094,1.27867425159808,0,0.199463657621632,0,0,0.56738522469114,1.24564449799115,0.251248665256743,0.521482918420201,0.65156653411535,0.605399502633369,0.736555271975129,0.632924774881769,0.845021145247767,1.06302149982522,1.88692780957538,0.673971786878971,0.300353785683013,0.48217676009124,2.28010194992999,0.79566670879636,2.37463399894024,0,0,0,0,0,0,0,0.954053754535364,0.569212969109448,0.587237189370939,0.382273228125229,0,1.12101712596307,0,0.590129310341499,1.17903228824749,1.02800749499755,0,0.32592226663359,0.946895611469467,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0,1.04535523804977,0.226618685395132,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0,0.80642697289893,0.534880391567015,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0.506328996723799,0.0974370051611986,0.252433774244115,0,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.57624608161542,1.94064817373566,1.41177339907723,0,0,0,0,0.637938751653163,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,2.15714200818617,0.320182673410333,0,0,0,0,0.460385919864187,0,0,0,0,1.48418066444991,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0.476809736941136,0.210998064528027,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0.176512253383001,0,0.137041924646751,0,0,0,0,0,0,0,0.343609788497747,0.343189995723929,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.169346664131569,0,0,0.160753148465019,0,0,0.674921674654501,1.5476039091159,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0,0,0,0,0,0,0,0.415045904808692,0.249960815924213,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0.899606224327209,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.39997479170986,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0.135939465953663,0,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0.691259661814092,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0,0.121917924982269,0.647428837187895,0,0,0,0,0,0,0,0,0.150962843566674,0,0,1.88126918544609,0,1.41405928260976,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@RAP1B | |short_description=p6@RAP1B | ||
}} | }} |
Latest revision as of 03:30, 20 September 2015
Short description: | p6@RAP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RAP1B_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 85bp_to_ENST00000545720_5end |
EntrezGene: | RAP1B |
HGNC: | 9857 |
UniProt: | F5H077 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.51e-14 | 76 |
hematopoietic system | 3.61e-14 | 98 |
blood island | 3.61e-14 | 98 |
bone element | 4.28e-13 | 82 |
hemolymphoid system | 1.40e-12 | 108 |
skeletal element | 1.05e-11 | 90 |
immune system | 3.02e-11 | 93 |
skeletal system | 2.79e-10 | 100 |
connective tissue | 1.91e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.40e-08 | 1 |